Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001317-TA|BGIBMGA001317-PA|undefined
(285 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 35 0.057
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 35 0.057
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 35 0.057
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 33 0.17
AC006695-12|AAF39983.2| 327|Caenorhabditis elegans Hypothetical... 33 0.23
AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical ... 32 0.40
AL132876-23|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 32 0.53
AL132876-22|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 32 0.53
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 31 0.93
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 31 0.93
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 31 0.93
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 31 0.93
Z50070-6|CAA90395.1| 548|Caenorhabditis elegans Hypothetical pr... 31 1.2
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.6
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 30 2.2
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ... 29 2.8
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 29 3.8
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 29 3.8
Z83105-4|CAB05486.1| 280|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 29 5.0
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 29 5.0
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 28 6.6
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 28 6.6
U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 28 6.6
AF099919-8|AAC68800.1| 488|Caenorhabditis elegans Hypothetical ... 28 6.6
Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z79758-5|CAB54321.1| 687|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical pr... 28 8.7
AL110478-12|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 8.7
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 158 VTENRLRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSL-EFMSTKYEEMKSKFE 216
V + R L+ E++ L + +K + + + D++D +S+ E T+ +E+ + E
Sbjct: 614 VAAEKARKFLEDELAK-LQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVE 672
Query: 217 SETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDL 264
+ LK + LK RDL N+ RR I+E + I D+
Sbjct: 673 NLLRENNRLKSEVNPLKDKYRDLENEYNSTQRR-IEEKETQIRYSDDI 719
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 158 VTENRLRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSL-EFMSTKYEEMKSKFE 216
V + R L+ E++ L + +K + + + D++D +S+ E T+ +E+ + E
Sbjct: 687 VAAEKARKFLEDELAK-LQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVE 745
Query: 217 SETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDL 264
+ LK + LK RDL N+ RR I+E + I D+
Sbjct: 746 NLLRENNRLKSEVNPLKDKYRDLENEYNSTQRR-IEEKETQIRYSDDI 792
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 158 VTENRLRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSL-EFMSTKYEEMKSKFE 216
V + R L+ E++ L + +K + + + D++D +S+ E T+ +E+ + E
Sbjct: 687 VAAEKARKFLEDELAK-LQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVE 745
Query: 217 SETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDL 264
+ LK + LK RDL N+ RR I+E + I D+
Sbjct: 746 NLLRENNRLKSEVNPLKDKYRDLENEYNSTQRR-IEEKETQIRYSDDI 792
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 203 FMSTKYEEMKSKFESETSTITEL--KCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
F+ YEE K K+ +E +TE+ KC +E+ KT + D R ++ + Y + +
Sbjct: 55 FVKMCYEEHKKKYPNENVQVTEISKKC-SEKWKTMVDDEKRRFYELAQKDAERYQAEVAA 113
Query: 261 MPDLDVFHDKLRVFKD 276
D + R KD
Sbjct: 114 YGGEDAMRKRKRAKKD 129
>AC006695-12|AAF39983.2| 327|Caenorhabditis elegans Hypothetical
protein W06H8.6 protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 194 IDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNER--LKTTIRDLTARLNAPLRRII 251
++ F L + +KS S +S E + R L T++ L N PLR+ +
Sbjct: 61 LERFPSPLATSAESVNSIKSSCSSRSSAERETERAQRRQLLNTSLSKLREEANMPLRKHL 120
Query: 252 DEYHSLITVMPDLDVFHDK 270
+H++ T+ DLD D+
Sbjct: 121 LIFHTVKTIQKDLDQLDDE 139
>AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical
protein F16B4.3 protein.
Length = 688
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/85 (17%), Positives = 42/85 (49%)
Query: 188 KNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPL 247
+ + + + R+S+ +T+ + +K+K E + I + + D E+L+ + ++ +
Sbjct: 25 RKIDEDLQQLRESISLSTTEVQNLKNKLELKEKVILDFRLDKEKLEEKVLNIEIIIEKRC 84
Query: 248 RRIIDEYHSLITVMPDLDVFHDKLR 272
+ I +E + + + V+ +K R
Sbjct: 85 KEIEEEKINHEFTVKKMKVYIEKAR 109
>AL132876-23|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 163 LRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTI 222
L IL+ E + + K + + KIDG S+ MS K+EE+K++ +S ++T
Sbjct: 521 LETILKNEQPFSEYHDLTKTALETARKFAHKIDG-NLSMAHMSMKWEELKAQIDSSSAT- 578
Query: 223 TELKCDNERLKTTIR---DLTARLNAPLRRIIDEYHSLITV 260
T D TIR DL + +A R+++ +LI +
Sbjct: 579 TLYVSDPSVANATIRYTFDLDSLNSATNRKLVHLGEALIKI 619
>AL132876-22|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 31.9 bits (69), Expect = 0.53
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 163 LRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTI 222
L IL+ E + + K + + KIDG S+ MS K+EE+K++ +S ++T
Sbjct: 521 LETILKNEQPFSEYHDLTKTALETARKFAHKIDG-NLSMAHMSMKWEELKAQIDSSSAT- 578
Query: 223 TELKCDNERLKTTIR---DLTARLNAPLRRIIDEYHSLITV 260
T D TIR DL + +A R+++ +LI +
Sbjct: 579 TLYVSDPSVANATIRYTFDLDSLNSATNRKLVHLGEALIKI 619
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 7 CSGCRN-VLDNDPCLGCCR--CKAKYDLVCANVASFDYELMDAKHKASWKCPECCSK 60
C+GC + ++ L C CK Y C ++ M+ + W CP C S+
Sbjct: 860 CAGCHHFIMPGSSTLSCLYHDCKNVYHRECTRISPSAATQMEGTPQVRWVCPSCESQ 916
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 31.1 bits (67), Expect = 0.93
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 7 CSGCRN--VLDNDPCLGCCRCKAKYDLVCANVASFDYELMDAKHKAS-WKCPECCSKEPK 63
CS C+ D++P C CKAKY + + E K + W CP C +
Sbjct: 93 CSFCKEDQKADDEPLKECSECKAKYHI--RKCLRYKEEFATNILKLNKWFCPRCVECDSC 150
Query: 64 TGNINTP 70
G I P
Sbjct: 151 KGYIGDP 157
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 203 FMSTKYEEMKSKFESETSTITEL--KCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
F+ YEE K K+ +E +TE+ KC +E+ KT + D R ++ + Y + ++V
Sbjct: 54 FVKMCYEEHKKKYPNENVQVTEISKKC-SEKWKTMVDDEKRRFYELAQKDAERYQAEVSV 112
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 203 FMSTKYEEMKSKFESETSTITEL--KCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
F+ YEE K K+ +E +TE+ KC +E+ KT + D R ++ + Y + ++V
Sbjct: 55 FVKMCYEEHKKKYPNENVQVTEISKKC-SEKWKTMVDDEKRRFYELAQKDAERYQAEVSV 113
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 203 FMSTKYEEMKSKFESETSTITEL--KCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
F+ YEE K K+ +E +TE+ KC +E+ KT + D R ++ + Y + ++V
Sbjct: 55 FVKMCYEEHKKKYPNENVQVTEISKKC-SEKWKTMVDDEKRRFYELAQKDAERYQAEVSV 113
>Z50070-6|CAA90395.1| 548|Caenorhabditis elegans Hypothetical
protein F43G6.6 protein.
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 22 CCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPKTG 65
C C+ Y +C+ + ++Y L+D + C +C EPKTG
Sbjct: 39 CYHCQTSYHFLCSGLEEYEYYLID-----KFYCSKC---EPKTG 74
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 201 LEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
L+ + T+ +E+K K E+E + + + + D A A LR+ + E+ ++IT
Sbjct: 524 LDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEAELRKELAEFQAIITA 582
Query: 261 M 261
M
Sbjct: 583 M 583
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 201 LEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
L+ + T+ +E+K K E+E + + + + D A A LR+ + E+ ++IT
Sbjct: 524 LDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEAELRKELAEFQAIITA 582
Query: 261 M 261
M
Sbjct: 583 M 583
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 201 LEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
L+ + T+ +E+K K E+E + + + + D A A LR+ + E+ ++IT
Sbjct: 284 LDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEAELRKELAEFQAIITA 342
Query: 261 M 261
M
Sbjct: 343 M 343
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 201 LEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITV 260
L+ + T+ +E+K K E+E + + + + D A A LR+ + E+ ++IT
Sbjct: 524 LDMLETERDELKKKLETEREQADQRDLEIAECRAKL-DEMAEKEAELRKELAEFQAIITA 582
Query: 261 M 261
M
Sbjct: 583 M 583
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 183 VVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTAR 242
V EF+ + +K D +E + + E ++ E + + +LK D E L+ + +
Sbjct: 217 VKEEFEEMSEKFKELEDEVELVKEERENIRLLVEDKEDEVADLKQDTESLQKQLEENQEE 276
Query: 243 LNAPLRRIIDEYHSLITVMPDLDVFHDK 270
L + ++ E + + +V H K
Sbjct: 277 LEI-VGNMLREEQGKVDQLQKRNVAHQK 303
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical protein
F01G4.3 protein.
Length = 1266
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 228 DNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDLDVFHDKLRVFKDRIG 279
D R++ I L L++ + +EYH+ + V+ L+ K+ K RIG
Sbjct: 1049 DRIRIERKIESLEYELSSDALLLSEEYHNRLKVLEALNFVEQKMVSLKGRIG 1100
>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
protein Y45G5AM.2 protein.
Length = 1061
Score = 29.5 bits (63), Expect = 2.8
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Query: 156 NYVTENRLRGILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKF 215
NY+ RL G I ++ IKKI T+ + + RDS+ + + K +
Sbjct: 739 NYLI-GRLIGEDHSMIDPSIMERIKKIKNTDQLKGM-RASNLRDSIAIVEFLCKFEKERR 796
Query: 216 ESETSTITELKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDLD--VFHDKLRV 273
+ T T EL D E +KT R+ L P E+ S+ PD VFH + +
Sbjct: 797 DGYTFTEYELAADIEEVKTRNREYIG-LKQPTIFSAGEHSSVHAHRPDAQKIVFHYQQFM 855
Query: 274 FK 275
F+
Sbjct: 856 FQ 857
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 20 LGCCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPKTGN 66
+GC C+ Y +C+ + F+Y L + + CP+C P TG+
Sbjct: 242 IGCDSCQTWYHFLCSGLEQFEYYLYE-----KFFCPKCV---PHTGH 280
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 20 LGCCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPKTGN 66
+GC C+ Y +C+ + F+Y L + + CP+C P TG+
Sbjct: 255 IGCDSCQTWYHFLCSGLEQFEYYLYE-----KFFCPKCV---PHTGH 293
>Z83105-4|CAB05486.1| 280|Caenorhabditis elegans Hypothetical
protein F14H3.4 protein.
Length = 280
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 165 GILQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITE 224
G + + + + + +T + ID L+ T YE + S+ + I +
Sbjct: 82 GFINPQTTMTMKIACFSLFLTHQWTTANTIDECETRLKQYRTDYERVLSQRKPSIQKIQQ 141
Query: 225 LKCDNERLKTTIRDLTARLNAPLRRIIDEYHSLITVMPDLDVFHDKLRVFKDRIGK 280
+ + ++L+ R A LRR++ E +P D+F + L+V + R+G+
Sbjct: 142 YEAELQQLQHDRRTHEAAFQL-LRRVLRE-----DGIPKRDLFQESLQVCRRRLGE 191
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 180 KKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIR 237
K +V K +++ L+ + E+K KFE T++K D +R + TIR
Sbjct: 3008 KNKLVKNLKKAEKQMENLSKGLQSVDEVVGELKRKFEVLMKEATQIKVDLDREQDTIR 3065
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 167 LQQEISTALNTTIKKIVVTEFKNVLDKIDG-FRDSLEFMSTKY----EEMKSKFESETST 221
L +++S A +K+ + K + DK++G + L ++ KY EE+K+ +S T
Sbjct: 23 LTRDVSDA--KLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQL 80
Query: 222 ITE---LKCDNERLKTTIRDLTARLN 244
E L+ +N RL+T R+L +L+
Sbjct: 81 KREKGVLETENRRLETAKRELDRQLS 106
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 6 ECSGCRNVLDNDPCLGCCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPKTG 65
+C CR + C C Y L CA + +++ A W C C +++ K
Sbjct: 1114 KCRSCRRKAAAHDLVLCSECDNCYHLKCAKLD------VNSDAPADWMCTSCRAQQRKVE 1167
Query: 66 N-INTPVRSTPYSDTKSQEEDV 86
N R S +EDV
Sbjct: 1168 NEAKRMARDDDQLAESSSQEDV 1189
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 19 CLGCCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPK 63
CL CC C+A + C + D + S +C C K K
Sbjct: 92 CLRCCDCRAPMSMTCFSRDGLILCKTDFSRRYSQRCAGCDGKLEK 136
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 19 CLGCCRCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEPK 63
CL CC C+A + C + D + S +C C K K
Sbjct: 69 CLRCCDCRAPMSMTCFSRDGLILCKTDFSRRYSQRCAGCDGKLEK 113
>U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical
protein F09E5.5 protein.
Length = 796
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 167 LQQEISTALNTTIKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTI 222
L +E+S + +I + + EF + K +RD+ T Y +SK++ TS I
Sbjct: 446 LAKEVSVEVIPSIINLTIQEFNELAGK---YRDAFTAYKTDYFAERSKYQEFTSNI 498
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 191 LDKIDG--FRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIRDLTARLNAPLR 248
L+KI+ R SL+ + EE K + I L+ +++TT ++L + ++
Sbjct: 576 LEKIETKHLRKSLKLSQQESEENSQKISEKNEEIEHLRA---QVQTTQQELNETIRLQMK 632
Query: 249 RIIDEYHSLITVMPDLDVFHDKLRVFKDRI 278
+I+D ++L+ + +++++ K +I
Sbjct: 633 QILDHQNALVKKSLQVIERDEEIQLLKGQI 662
>AF099919-8|AAC68800.1| 488|Caenorhabditis elegans Hypothetical
protein F40G9.5 protein.
Length = 488
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 179 IKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKS 213
++K F+++ K FR+ L+F++TKY + S
Sbjct: 277 VEKEFKGHFEDIKSKTSNFRELLDFLNTKYGPLSS 311
>Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical
protein W10D5.3g protein.
Length = 695
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 24 RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEP 62
RC+ L C ++ S+ LM + K +W+CP C S P
Sbjct: 315 RCQDCTHLQCFDLLSY---LMMNEKKPTWQCPVCSSNCP 350
>Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical
protein W10D5.3f protein.
Length = 763
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 24 RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEP 62
RC+ L C ++ S+ LM + K +W+CP C S P
Sbjct: 382 RCQDCTHLQCFDLLSY---LMMNEKKPTWQCPVCSSNCP 417
>Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical
protein W10D5.3e protein.
Length = 673
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 24 RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEP 62
RC+ L C ++ S+ LM + K +W+CP C S P
Sbjct: 382 RCQDCTHLQCFDLLSY---LMMNEKKPTWQCPVCSSNCP 417
>Z79758-5|CAB54321.1| 687|Caenorhabditis elegans Hypothetical
protein W10D5.3d protein.
Length = 687
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 24 RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEP 62
RC+ L C ++ S+ LM + K +W+CP C S P
Sbjct: 380 RCQDCTHLQCFDLLSY---LMMNEKKPTWQCPVCSSNCP 415
>Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical
protein W10D5.3c protein.
Length = 790
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 24 RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEP 62
RC+ L C ++ S+ LM + K +W+CP C S P
Sbjct: 437 RCQDCTHLQCFDLLSY---LMMNEKKPTWQCPVCSSNCP 472
>Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical
protein W10D5.3a protein.
Length = 689
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 24 RCKAKYDLVCANVASFDYELMDAKHKASWKCPECCSKEP 62
RC+ L C ++ S+ LM + K +W+CP C S P
Sbjct: 382 RCQDCTHLQCFDLLSY---LMMNEKKPTWQCPVCSSNCP 417
>AL110478-12|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 179 IKKIVVTEFKNVLDKIDGFRDSLEFMSTKYEEMKSKFESETSTITELKCDNERLKTTIR- 237
+KK++ +++ L+KI ++ E + T+ E+ K S + ++K E +K IR
Sbjct: 633 VKKVLGVNYEDCLEKIGKAQEETEKVKTELEQEKG--IDYQSILEKIKEAREEVKNVIRS 690
Query: 238 DLTARLN 244
D T LN
Sbjct: 691 DYTDCLN 697
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,811,389
Number of Sequences: 27539
Number of extensions: 227962
Number of successful extensions: 1197
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1175
Number of HSP's gapped (non-prelim): 70
length of query: 285
length of database: 12,573,161
effective HSP length: 81
effective length of query: 204
effective length of database: 10,342,502
effective search space: 2109870408
effective search space used: 2109870408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -