Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001316-TA|BGIBMGA001316-PA|undefined
(401 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5AIC9 Cluster: Putative uncharacterized protein; n=1; ... 39 0.27
UniRef50_UPI0000E49D2E Cluster: PREDICTED: similar to large low ... 38 0.62
UniRef50_A2SIH5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.82
UniRef50_Q7K0W4 Cluster: LD27203p; n=7; Endopterygota|Rep: LD272... 37 0.82
UniRef50_A7SJ02 Cluster: Predicted protein; n=2; Nematostella ve... 36 1.4
UniRef50_Q119G1 Cluster: Phage Tail Collar; n=3; cellular organi... 36 1.9
UniRef50_UPI00015B5505 Cluster: PREDICTED: hypothetical protein;... 35 3.3
UniRef50_Q4RX03 Cluster: Chromosome 11 SCAF14979, whole genome s... 35 3.3
UniRef50_Q0RE24 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_A6C0G8 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_Q94H79 Cluster: Putative uncharacterized protein Os03g2... 35 3.3
UniRef50_Q7R6F5 Cluster: GLP_574_10064_7116; n=1; Giardia lambli... 35 3.3
UniRef50_Q7S4R9 Cluster: Putative uncharacterized protein NCU057... 35 3.3
UniRef50_UPI000069DAA7 Cluster: collagen, type XXIV, alpha 1; n=... 35 4.4
UniRef50_Q8XLT5 Cluster: Collagen-like protein; n=4; Clostridium... 35 4.4
UniRef50_Q5UIR3 Cluster: Collagen-like protein; n=2; Firmicutes|... 35 4.4
UniRef50_Q9BMD5 Cluster: No-mechanoreceptor potential A long iso... 35 4.4
UniRef50_A4R1L2 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_Q6ZN84 Cluster: Coiled-coil domain-containing protein 8... 34 5.8
UniRef50_Q58MY1 Cluster: Phage tail fiber-like protein; n=1; Cya... 34 7.6
UniRef50_Q7Q0A8 Cluster: ENSANGP00000011710; n=1; Anopheles gamb... 34 7.6
UniRef50_Q5KGJ5 Cluster: Putative uncharacterized protein; n=2; ... 34 7.6
>UniRef50_A5AIC9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 541
Score = 38.7 bits (86), Expect = 0.27
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 2 RVYICLSG-SHRESKV-QADEIPFREPEETEGFYNRPQGEGR----YPVRVEEHAQ-SPY 54
R +C + S+ E+ V Q + I FR P TE ++ P G YPVR EE+ SP
Sbjct: 58 RPIVCFNPISNTETYVAQTETIVFRTPAVTEYRFSAPGRVGEHKHSYPVREEEYKLGSPG 117
Query: 55 RVQSQAV---LTVDVSHRESKVQADEIPFREPEETEGFYNRPQ--GEGRY--PVRVEEHA 107
RV Q + V+ S + DE + P E + P E +Y PVRVEE+
Sbjct: 118 RVDEQKYSYPVRVEEYKHGSPGRVDEHKYSYPVRVEYKPSSPGKVDEHKYSHPVRVEEYK 177
Query: 108 QSP 110
SP
Sbjct: 178 HSP 180
>UniRef50_UPI0000E49D2E Cluster: PREDICTED: similar to large low
complexity coiled coil protien with large repeat region;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to large low complexity coiled coil protien with
large repeat region - Strongylocentrotus purpuratus
Length = 435
Score = 37.5 bits (83), Expect = 0.62
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 6 CLSGSHRESKVQADEIPFREPEETEGFYN--RPQGEGRYPVRVEEHAQSPYRVQSQAVLT 63
C++ H +S+ +A++I R E +EG N PQG + EE + R + ++
Sbjct: 20 CMAPHHADSQEEANKIQQRAKERSEGRVNSKTPQGSPPFTDSQEEANEIQQRAKERSEGG 79
Query: 64 VDVSHRE-------SKVQADEIPFREPEETEGFYN--RPQGEGRYPVRVEEHAQSPYRVQ 114
V+ + S+ +A+EI R E +EG N PQG + EE R +
Sbjct: 80 VNSKTPQGSPPFTYSQEEANEIQQRAKERSEGRVNSKTPQGSPPFTDSQEEADNIQQRAK 139
Query: 115 SQAVLTVDVPKNYDSDGTLDSLQ 137
++ V+ DS D++Q
Sbjct: 140 ERSEGRVNSKTPQDSQEEADNIQ 162
>UniRef50_A2SIH5 Cluster: Putative uncharacterized protein; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
uncharacterized protein - Methylibium petroleiphilum
(strain PM1)
Length = 248
Score = 37.1 bits (82), Expect = 0.82
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 262 IGPNRDQNQAVLVGPDGPTGVIGPDGPRDV-GFSESAQRGVL 302
IGP A GP GPTG IGP G + V GF ES Q L
Sbjct: 88 IGPIGPVGPAGSAGPAGPTGAIGPQGAKAVAGFYESVQTNQL 129
>UniRef50_Q7K0W4 Cluster: LD27203p; n=7; Endopterygota|Rep: LD27203p
- Drosophila melanogaster (Fruit fly)
Length = 328
Score = 37.1 bits (82), Expect = 0.82
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 41 RYPVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREPEETEGFYNRPQGEGRYP 100
+ P V+ + PY V+ V+V + V ++P+ + Y + + E YP
Sbjct: 188 KVPYEVKYEVEKPYDVEVPKPYDVEVEKPYTVVVEKKVPYEVKVPVDKPY-KVEVEKPYP 246
Query: 101 VRVEEHAQSPYRVQSQAVLTVDVPKNYD 128
V V+ PY V+ + TV+ P Y+
Sbjct: 247 VHVKVPVPQPYTVEKKVPYTVEKPVPYE 274
>UniRef50_A7SJ02 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 262
Score = 36.3 bits (80), Expect = 1.4
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 20 EIPF-REPEETEGFYNRPQGEGRYPV-RVEEHAQSPY-RVQSQAVLTVDVSHRESKVQAD 76
E P+ R P + + YNR + +G +P R A+ PY R +SQ + + K
Sbjct: 77 EFPYNRTPSQGKFSYNRTRSQGEFPCNRTRSQAEFPYNRTRSQGEFPCNRTRSHGKFPYS 136
Query: 77 EIPF---REPEETEGFYNRPQGEGRYP 100
R P + + YNR + +G +P
Sbjct: 137 RTRSHGDRTPSQGKFSYNRTRSQGEFP 163
Score = 35.1 bits (77), Expect = 3.3
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 24 REPEETEGFYNRPQGEGRYPV-RVEEHAQSPY-RVQSQAVLTVDVSHRESKVQADEIPFR 81
R P + + YNR + +G +P R A+ Y R +SQ + ++ ++ QA+ R
Sbjct: 5 RTPSQGKFSYNRTRSQGEFPCNRTRSQAEFAYNRTRSQG----EFAYNRTRSQAEFPNNR 60
Query: 82 EPEETEGFYNRPQGEGRYPV-RVEEHAQSPY-RVQSQ 116
+ E YNR + +G +P R + Y R +SQ
Sbjct: 61 TRSQGEFAYNRTRSQGEFPYNRTPSQGKFSYNRTRSQ 97
>UniRef50_Q119G1 Cluster: Phage Tail Collar; n=3; cellular
organisms|Rep: Phage Tail Collar - Trichodesmium
erythraeum (strain IMS101)
Length = 1873
Score = 35.9 bits (79), Expect = 1.9
Identities = 29/99 (29%), Positives = 33/99 (33%), Gaps = 1/99 (1%)
Query: 190 PMLLPGQQNLARPFPPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXX 248
P PG P P A + G+ GP GP VG +GP P
Sbjct: 938 PSGAPGPVGPIGPVGPAGADGVPGLAGPVGPVGPVGPVGPTGAPGPAGPAGPIGPVGPAG 997
Query: 249 XXXXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDG 287
IGP+ A VGP GP G G DG
Sbjct: 998 ADGVPGLTGPIGPIGPSGAPGPAGPVGPIGPVGPAGADG 1036
>UniRef50_UPI00015B5505 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 420
Score = 35.1 bits (77), Expect = 3.3
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 42 YPVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREPEETEGFYNRPQGEGRYPV 101
YPV+V H PY V + + V V + E P+ P E + Y + YPV
Sbjct: 226 YPVKVPVHVAHPYPVIKKVPVAVKVPVEKPVPYPVEKPYPVPVEKKVPY-PVEKLVHYPV 284
Query: 102 RVEEHAQSPYRVQSQAVLTVDVP 124
+V PY V+ V VP
Sbjct: 285 KVHVDKPRPYPVEKHVPYPVKVP 307
>UniRef50_Q4RX03 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 11 SCAF14979, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1208
Score = 35.1 bits (77), Expect = 3.3
Identities = 31/107 (28%), Positives = 34/107 (31%), Gaps = 2/107 (1%)
Query: 195 GQQNLARPFPPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXX 253
G + L P PP S NG G GPA G G TP
Sbjct: 825 GARGLTGPIGPPGPSGPNGEKGETGPAGPSGAPGTRGTPGDRGETGSPGPAGFAGPPGAD 884
Query: 254 XXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSESAQRG 300
G + A GP GP+G GP GP V F RG
Sbjct: 885 GQPGIKGEQGETGQKGDAGAPGPQGPSGAPGPAGPTGV-FGPKGARG 930
>UniRef50_Q0RE24 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 646
Score = 35.1 bits (77), Expect = 3.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 261 SIGPNRDQNQAVLVGPDGPTGVIGPDGP 288
S+GP + VGPDGP G +GPDGP
Sbjct: 115 SVGP---EGSVGSVGPDGPVGSVGPDGP 139
>UniRef50_A6C0G8 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 283
Score = 35.1 bits (77), Expect = 3.3
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 15 KVQADEIPFREP-EETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRESKV 73
++Q + F+E EE + Y +PQ + PV ++ Q+PY+ Q Q + +R+ +
Sbjct: 184 EIQQRKRDFQERREELKSSYYQPQ-QAMIPVDYQQ--QAPYQQQYQQPAPLQQQYRQPQY 240
Query: 74 QADEIP--FREPEETEGFYNRPQGEGRYPVRVEEHAQSP 110
Q + ++ P+ + Y +PQ + YPV + Q P
Sbjct: 241 QQPQPQQQYQRPQHQQQ-YQQPQLQNSYPVNSPGYEQKP 278
>UniRef50_Q94H79 Cluster: Putative uncharacterized protein
Os03g28360; n=6; Oryza sativa|Rep: Putative
uncharacterized protein Os03g28360 - Oryza sativa subsp.
japonica (Rice)
Length = 413
Score = 35.1 bits (77), Expect = 3.3
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 44 VRVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREPEETEGFYNRPQGEGRYPVRV 103
VR E H + V+ + + +V RE D +P RE E R GE VR
Sbjct: 292 VREEVHGEENMPVREEVCVEGNVPLREEVHAEDNVPLREEVNVEEVRERVNGEEDVEVRA 351
Query: 104 EEHAQSPYRVQSQAVLTVDVPKN 126
E H + V L+ DV N
Sbjct: 352 EGHVKDGREVGEDEELS-DVKAN 373
>UniRef50_Q7R6F5 Cluster: GLP_574_10064_7116; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_574_10064_7116 - Giardia lamblia
ATCC 50803
Length = 982
Score = 35.1 bits (77), Expect = 3.3
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 9 GSHRESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSH 68
G E +A++ P E E EG N PQ R E + + P + + + H
Sbjct: 511 GPVEEPVPEAEDAPHMEEIEIEG--NSPQT--RMVREFEPNVEEPIHDEEHLMTLEEPIH 566
Query: 69 RESKVQADEIPFRE-PEETEGFYNRPQGEGRYPVRVEEHAQSPYRV 113
E A + P E P E ++ Q E P +E +SP V
Sbjct: 567 EEDHNMAPDRPLEEEPIEESNHHDDDQNEQEAPAEIEMEEESPREV 612
>UniRef50_Q7S4R9 Cluster: Putative uncharacterized protein
NCU05753.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU05753.1 - Neurospora crassa
Length = 580
Score = 35.1 bits (77), Expect = 3.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 190 PMLLPGQQNLARPFPPPPASEINGVLGPGPAHQ 222
P+ LP QQ+ ARP PPPP P P HQ
Sbjct: 196 PVPLPAQQDGARPPPPPPKPGAPAAAAPIPQHQ 228
>UniRef50_UPI000069DAA7 Cluster: collagen, type XXIV, alpha 1; n=4;
Euteleostomi|Rep: collagen, type XXIV, alpha 1 - Xenopus
tropicalis
Length = 1096
Score = 34.7 bits (76), Expect = 4.4
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 205 PPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSIG 263
PP A G +GP GPA G+ GP P +G
Sbjct: 101 PPGADGSPGDIGPAGPAGPPGIPGPQGPPGNMGQPGMKGDKGAIGLPGPPGLKGKVGPLG 160
Query: 264 PNRDQNQAVLVGPDGPTGVIGPDGP 288
DQ L GP GP GV+G GP
Sbjct: 161 KIGDQGLQGLPGPPGPEGVLGERGP 185
>UniRef50_Q8XLT5 Cluster: Collagen-like protein; n=4; Clostridium
perfringens|Rep: Collagen-like protein - Clostridium
perfringens
Length = 397
Score = 34.7 bits (76), Expect = 4.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 262 IGPNRDQNQAVLVGPDGPTGVIGPDGP 288
IGP Q + L GP GP G GP+GP
Sbjct: 131 IGPQGPQGEQGLTGPQGPAGSQGPEGP 157
>UniRef50_Q5UIR3 Cluster: Collagen-like protein; n=2;
Firmicutes|Rep: Collagen-like protein - Bacillus
megaterium
Length = 359
Score = 34.7 bits (76), Expect = 4.4
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 190 PMLLPGQQNLARPFP-----PPPASEINGVLG-PGPAHQVGLLGPFDT--PQGFLXXXXX 241
P LPG + P P PP A+ G+ G PGPA G+ GP PQG +
Sbjct: 48 PRGLPGPPGIGIPGPAGVAGPPGAAGPQGLQGEPGPAGAQGIQGPIGPQGPQGEIGPQGI 107
Query: 242 XXXXXXXXXXXXXXXXXX-XSIGPNRDQNQAVLVGPDGPTGVIGPDGPR 289
+ GP Q + G G G IGP GP+
Sbjct: 108 QGEIGPAGPAGPAGVAGPPGAAGPQGPQGEPGPAGAQGIQGPIGPQGPQ 156
>UniRef50_Q9BMD5 Cluster: No-mechanoreceptor potential A long
isoform precursor; n=20; Sophophora|Rep:
No-mechanoreceptor potential A long isoform precursor -
Drosophila melanogaster (Fruit fly)
Length = 1557
Score = 34.7 bits (76), Expect = 4.4
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 19 DEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQS-------PYRVQSQAVLTVDVSHRES 71
D + EP E + +R G+ RYP R + + PY + L D+ H
Sbjct: 601 DRXRYPEPYPPERYXDR-YGDRRYPERERDRDRDRLPYRPLPYPGINDNSLPSDLPHTRP 659
Query: 72 KVQADEIPFREPEETEGFYNRPQGEGRYPVR 102
D+ PFR G Y + EGRYP R
Sbjct: 660 YPTDDDAPFRPYGYGGGRYGENRYEGRYPPR 690
>UniRef50_A4R1L2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1472
Score = 34.3 bits (75), Expect = 5.8
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 24 REPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREP 83
++P + + N + +P+R + AQSPY Q + +D + R+++ ++ + P
Sbjct: 46 QQPRASNQYPNANRAPTTFPIRSSQAAQSPYHSQPTGLFNLDHTQRQAEHSQHQLRRKTP 105
Query: 84 EET--EGFYNRPQG 95
T G+ P G
Sbjct: 106 SGTIDAGYDGSPAG 119
>UniRef50_Q6ZN84 Cluster: Coiled-coil domain-containing protein 81;
n=21; Theria|Rep: Coiled-coil domain-containing protein
81 - Homo sapiens (Human)
Length = 652
Score = 34.3 bits (75), Expect = 5.8
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 132 TLDSLQYCKCVDTPDCNPRPGSARACG----SGKYLC--CYKRKQSNKVNSYQSEYFNEV 185
T +SL Y C+ D +P ++ AC +G+ +C C +R Q N + Y E E+
Sbjct: 291 TPESLSYPSCLKH-DSEMKPQTSPACQDHNKAGQEMCYVCLQRAQRNSLLYYSEERRREI 349
Query: 186 EDER 189
EDER
Sbjct: 350 EDER 353
>UniRef50_Q58MY1 Cluster: Phage tail fiber-like protein; n=1;
Cyanophage P-SSM2|Rep: Phage tail fiber-like protein -
Cyanophage P-SSM2
Length = 597
Score = 33.9 bits (74), Expect = 7.6
Identities = 23/87 (26%), Positives = 26/87 (29%)
Query: 202 PFPPPPASEINGVLGPGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXS 261
P P P ++ GPGP G GP P G
Sbjct: 201 PGPAGPQGDVGPSGGPGPTGPAGPPGPAGGPPGPQGPQGDAGPTGPTGPPGTGSPGPAGP 260
Query: 262 IGPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ GP GP G GP GP
Sbjct: 261 PGPSGGPGPTGPAGPTGPDGPTGPTGP 287
>UniRef50_Q7Q0A8 Cluster: ENSANGP00000011710; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011710 - Anopheles gambiae
str. PEST
Length = 289
Score = 33.9 bits (74), Expect = 7.6
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 157 CGSGKYLCCYKRKQSNKVNSYQSEYFNEV-EDERPMLLPGQQNLARPFPP 205
CG CCY+ + N V +Q +Y NE+ ++ + + +PG+Q +P+ P
Sbjct: 104 CGYQCDQCCYRSRDPNSVVVHQRKYHNELFQNAKILCVPGRQ---KPYTP 150
>UniRef50_Q5KGJ5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 498
Score = 33.9 bits (74), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 178 QSEYFNEVEDERPMLLPGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGPFDTP 232
+ EY+ + E+ P LP + +R PPPP++ GP PA + P P
Sbjct: 306 EPEYYGQEEETAPPPLPAGRPASRLPPPPPSAPPPPPPGPSPASRAAPPAPARAP 360
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,315,950
Number of Sequences: 1657284
Number of extensions: 16048741
Number of successful extensions: 41556
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 40894
Number of HSP's gapped (non-prelim): 676
length of query: 401
length of database: 575,637,011
effective HSP length: 102
effective length of query: 299
effective length of database: 406,594,043
effective search space: 121571618857
effective search space used: 121571618857
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 74 (33.9 bits)
- SilkBase 1999-2023 -