Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001316-TA|BGIBMGA001316-PA|undefined
(401 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_13272| Best HMM Match : Involucrin2 (HMM E-Value=0.59) 33 0.41
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.54
SB_25491| Best HMM Match : Peptidase_M50 (HMM E-Value=2.2) 33 0.54
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 31 1.7
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 31 1.7
SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025) 30 3.8
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 30 3.8
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 30 3.8
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 30 3.8
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 30 3.8
SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25) 29 5.0
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 29 5.0
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23) 29 6.7
SB_47579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.8
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 29 8.8
SB_24563| Best HMM Match : Mad3_like (HMM E-Value=0.71) 29 8.8
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.8
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 29 8.8
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.8
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 35.9 bits (79), Expect = 0.058
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 17 QADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQAD 76
Q + PF+ ++ + + RP + + P R + Q P+R + Q VQ
Sbjct: 564 QQNRQPFQSGQQPQQAF-RPGQQPQQPSRPGQQHQQPFRPEQQP------QQPFRSVQPP 616
Query: 77 EIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQA 117
+ PFR ++T+ +++P + + R + Q P+R + Q+
Sbjct: 617 QQPFRADQQTQQPFHQPGQQPQQSFRPGQQPQQPFRPEQQS 657
Score = 33.1 bits (72), Expect = 0.41
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 17 QADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQAD 76
Q ++PF+ + + + P + + P R E+ Q P+R Q VQ
Sbjct: 474 QQPQLPFQPGQSPQQPF-LPDQQSQKPFRPEQQPQQPFRPGQQP------QQPFRSVQPP 526
Query: 77 EIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQ 116
+ PFR ++T+ + Q + P R + Q P+R Q
Sbjct: 527 QQPFRADQQTQQPFQSGQ-QPHQPFRSVQQPQQPFRADQQ 565
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 16 VQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQA 60
VQ + PFR ++T+ +++P + + R + Q P+R + Q+
Sbjct: 613 VQPPQQPFRADQQTQQPFHQPGQQPQQSFRPGQQPQQPFRPEQQS 657
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 35.1 bits (77), Expect = 0.10
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 204 PPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI 262
P P + G+ GP GP G+ GP + P+G I
Sbjct: 340 PQGPKGD-TGITGPEGPKGDTGITGP-EGPKGDTGITGPQGPKGDTGITGPQGPKGDTGI 397
Query: 263 -GPNRDQNQAVLVGPDGP---TGVIGPDGPR-DVGFS 294
GP + + GP+GP TG+ GP+GP+ D G +
Sbjct: 398 TGPQGPKGDTGITGPEGPKGDTGITGPEGPKGDTGIT 434
Score = 33.9 bits (74), Expect = 0.23
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 213 GVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI-GPNRDQNQ 270
G+ GP GP G+ GP + P+G I GP +
Sbjct: 336 GITGPQGPKGDTGITGP-EGPKGDTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGD 394
Query: 271 AVLVGPDGP---TGVIGPDGPR-DVGFS 294
+ GP GP TG+ GP+GP+ D G +
Sbjct: 395 TGITGPQGPKGDTGITGPEGPKGDTGIT 422
Score = 33.5 bits (73), Expect = 0.31
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 204 PPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI 262
P P + G+ GP GP G+ GP P+G I
Sbjct: 352 PEGPKGD-TGITGPEGPKGDTGITGP-QGPKGDTGITGPQGPKGDTGITGPQGPKGDTGI 409
Query: 263 -GPNRDQNQAVLVGPDGP---TGVIGPDGPR-DVGFS 294
GP + + GP+GP TG+ GP GP+ D G +
Sbjct: 410 TGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTGIT 446
Score = 32.7 bits (71), Expect = 0.54
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Query: 204 PPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI 262
P P + G+ GP GP G+ GP P+G I
Sbjct: 364 PEGPKGD-TGITGPQGPKGDTGITGP-QGPKGDTGITGPQGPKGDTGITGPEGPKGDTGI 421
Query: 263 -GPNRDQNQAVLVGPDGP---TGVIGPDGPR-DVGFS 294
GP + + GP GP TG+ GP GP+ D G +
Sbjct: 422 TGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTGIT 458
Score = 32.3 bits (70), Expect = 0.72
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 204 PPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI 262
P P + G+ GP GP G+ GP P+G I
Sbjct: 376 PQGPKGD-TGITGPQGPKGDTGITGP-QGPKGDTGITGPEGPKGDTGITGPEGPKGDTGI 433
Query: 263 -GPNRDQNQAVLVGPDGP---TGVIGPDGPR-DVG 292
GP + + GP GP TG+ GP GP+ D G
Sbjct: 434 TGPQGPKGDTGITGPQGPKGDTGITGPQGPKGDTG 468
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR-DVGFS 294
GP D GP G TG+ GP+GP+ D G +
Sbjct: 330 GPKGDTGITGPQGPKGDTGITGPEGPKGDTGIT 362
>SB_13272| Best HMM Match : Involucrin2 (HMM E-Value=0.59)
Length = 146
Score = 33.1 bits (72), Expect = 0.41
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 12 RESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRES 71
+E+KVQ +++ + +E + N+ Q +V+E+ +VQ V V +E+
Sbjct: 5 QENKVQENKVQENKVQENKVQENKVQENKVQESKVQENKVQENKVQENKVQENKV--QEN 62
Query: 72 KVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVPKN 126
KVQ +++ + +E + N+ Q +V+E+ +VQ V V +N
Sbjct: 63 KVQENKVQENKAQENKVQENKVQENKVQENKVQENKVQENKVQENKVQESKVQEN 117
Score = 31.9 bits (69), Expect = 0.95
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 12 RESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRES 71
+E+KVQ +++ + +E + N+ Q +V+E+ +VQ V V +E+
Sbjct: 10 QENKVQENKVQENKVQENKVQENKVQESKVQENKVQENKVQENKVQENKVQENKV--QEN 67
Query: 72 KVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVPKN 126
KVQ ++ + +E + N+ Q +V+E+ +VQ V V KN
Sbjct: 68 KVQENKAQENKVQENKVQENKVQENKVQENKVQENKVQENKVQESKVQENKVQKN 122
Score = 29.1 bits (62), Expect = 6.7
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 12 RESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRES 71
+E+KVQ +++ + +E + N+ Q +V+E+ +VQ V +E+
Sbjct: 25 QENKVQENKVQESKVQENKVQENKVQENKVQENKVQENKVQENKVQENKAQENKV--QEN 82
Query: 72 KVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAV 118
KVQ +++ + +E + N+ Q +V+E+ +VQ V
Sbjct: 83 KVQENKVQENKVQENKVQENKVQENKVQESKVQENKVQKNKVQENKV 129
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 32.7 bits (71), Expect = 0.54
Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 6/91 (6%)
Query: 204 PPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI 262
P P + G GP GP G GP + P+G
Sbjct: 68 PTGPKGD-TGATGPTGPKGDTGATGP-NGPKG--DTGATGPAGPTGPTGPKGDTGPTDPT 123
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
GPN D GP G TG GP GP+ D G
Sbjct: 124 GPNGDTGATGPTGPKGDTGATGPTGPKGDTG 154
Score = 30.3 bits (65), Expect = 2.9
Identities = 26/91 (28%), Positives = 29/91 (31%), Gaps = 6/91 (6%)
Query: 204 PPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSI 262
P P + G GP GP G GP P+G
Sbjct: 2 PTGPKGD-TGATGPTGPKGDTGATGPTG-PKG--DTGATGPTGPTGPKGDTGATGPTGPT 57
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
GP D GP G TG GP GP+ D G
Sbjct: 58 GPKGDTGATGPTGPKGDTGATGPTGPKGDTG 88
Score = 29.5 bits (63), Expect = 5.0
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 213 GVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXXXXXXXSIGPNRDQNQA 271
G GP GP ++G GP D P G + GP +
Sbjct: 217 GPKGPTGPKGEIGATGPTD-PTG--PKGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDT 273
Query: 272 VLVGPDGPTGVIGPDG 287
GP GPTG GP G
Sbjct: 274 GATGPAGPTGPTGPKG 289
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP D GP G TG GP GP
Sbjct: 136 GPKGDTGATGPTGPKGDTGATGPTGP 161
>SB_25491| Best HMM Match : Peptidase_M50 (HMM E-Value=2.2)
Length = 771
Score = 32.7 bits (71), Expect = 0.54
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 43 PVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREPEETEGFYNRPQGEGRY--- 99
P+R E HA P R +S A L + SH + ++ P R E N+ RY
Sbjct: 473 PLRYESHA--PLRYESHAPLRYE-SHTPLRYES-HAPLRY-ESRAPLRNKSHAPLRYESD 527
Query: 100 -PVRVEEHAQSPYRVQSQAVLTV--DVPKNYDSDGTL 133
P+R E HA P R +S A L D P Y+S L
Sbjct: 528 APLRYESHA--PLRYESDAPLRYESDAPLRYESHAPL 562
Score = 28.7 bits (61), Expect = 8.8
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 45 RVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVE 104
+ E + +P R +S A L + SH + ++ P R Y E R P+R +
Sbjct: 465 KFHEKSHAPLRYESHAPLRYE-SHAPLRYES-HTPLRYESHAPLRY-----ESRAPLRNK 517
Query: 105 EHAQSPYRVQSQAVLTVD--VPKNYDSDGTL 133
HA P R +S A L + P Y+SD L
Sbjct: 518 SHA--PLRYESDAPLRYESHAPLRYESDAPL 546
>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Query: 7 LSGSHRESKVQADEIPFREPEETEGFYNRPQG----EGRYPVRVEEHAQSPYRVQSQAVL 62
L+ + ++K + P + E + RPQ P+ SP S
Sbjct: 32 LNRTRFQNKPHHRDQPSGDRPERDSNRTRPQSANGSSSHSPLNNPPTTSSPGNASSSGNS 91
Query: 63 TVDVSH-RESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSP 110
T S+ R+ +V + +PFR E E + R + E P++ E P
Sbjct: 92 TTSPSNTRDGQVARNSVPFRTREARESEFTRAKQEAPQPIKPAEKPPKP 140
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 101 VRVEEHAQSP-YRV-QSQAVLTVDVPKNYDSDGTLDSLQYCKCV 142
V+ +H Q P YR+ Q+QAV TV + DS DS Q+ +CV
Sbjct: 388 VQTTQHRQCPPYRLYQAQAVRTVQTLPSTDSAHRTDSTQHRQCV 431
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 31.1 bits (67), Expect = 1.7
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 26 PEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHRESKVQADEIPFREPEE 85
P+E +RPQ E R +E P R Q D R +A P R PEE
Sbjct: 65 PQEVTNTPDRPQEETNRLDRPQEITDVPERPQEAK----DEPDRPQ--EATHEPDR-PEE 117
Query: 86 TEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVP-KNYDSDGTLDSLQYCKCVDT 144
T +RPQ P R +E +P R Q T D P ++++ T D Q + D+
Sbjct: 118 TTDVPDRPQEVTTTPDRPQEANDAPDRPQE----TNDAPERSHEVTNTPDKPQ--EVTDS 171
Query: 145 PD 146
PD
Sbjct: 172 PD 173
>SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 271 AVLVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
AV+ GP GP G GP GP +S Q +
Sbjct: 207 AVIAGPPGPPGPPGPPGPPGGVYSSGPQNSI 237
>SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025)
Length = 930
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Query: 262 IGPNRDQNQAVLVGPDGP--TGVIGPD 286
+GPN +Q +A +VGPD P ++GPD
Sbjct: 482 VGPN-EQGEATIVGPDEPDEATIVGPD 507
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 273 LVGPDGPTGVIGPDGPR-DVGFSESAQRGV 301
L GP GP G GP+GP+ ++G S +G+
Sbjct: 301 LPGPKGPPGPTGPEGPKGNMGISFKGPQGM 330
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.9 bits (64), Expect = 3.8
Identities = 27/107 (25%), Positives = 33/107 (30%), Gaps = 8/107 (7%)
Query: 190 PMLLPGQQNL----ARPFPPPPASEINGVLGP----GPAHQVGLLGPFDTPQGFLXXXXX 241
P LPG Q + P PP G GP GP +G +GP
Sbjct: 1696 PPGLPGPQGIPGYPGAPAGPPGRDGPMGPPGPSGGQGPPGDMGSMGPMGMGGEHKDFKRS 1755
Query: 242 XXXXXXXXXXXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGP 288
+ G + L GP GP G+ GP GP
Sbjct: 1756 ASAQVGQYGYPSQAASYIGTQGASGVDGPPGLAGPQGPKGMPGPPGP 1802
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 275 GPDGPTGVIGPDGP 288
GPDGP G+ GP GP
Sbjct: 1674 GPDGPMGLPGPQGP 1687
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 262 IGPNRDQNQAVLVGPDGPTGVIGPDGP 288
+GP LVGP GP G +GP GP
Sbjct: 1106 LGPVGPVGPVGLVGPVGPVGPVGPVGP 1132
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 262 IGPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSE 295
+GP VGP GP G +GP GP + F++
Sbjct: 1145 VGPVGPVGPVGPVGPVGPVGPVGPVGPVAIEFAD 1178
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN Q GP+GP G GP GP
Sbjct: 53 GPNGPQGPNGPQGPNGPQGPSGPQGP 78
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN Q GP+GP G GP GP
Sbjct: 35 GPNGPQGPNGPQGPNGPQGPNGPQGP 60
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN Q GP+GP G GP GP
Sbjct: 41 GPNGPQGPNGPQGPNGPQGPNGPQGP 66
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN Q GP+GP G GP GP
Sbjct: 47 GPNGPQGPNGPQGPNGPQGPNGPQGP 72
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
GP V GP GP+G GP+GP+
Sbjct: 74 GPQGPSGPQVPNGPQGPSGPQGPNGPQ 100
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDG-PRDVGFS 294
GP D + +GP G G IGP G P + GFS
Sbjct: 8 GPQGDNGRDGPIGPKGDQGDIGPQGPPGERGFS 40
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 275 GPDGPTGVIGPDGPRDV 291
GP GP+G GP GP D+
Sbjct: 134 GPAGPSGADGPQGPEDL 150
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 29.9 bits (64), Expect = 3.8
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 191 MLLPGQQNLARP--FPPPPASEINGVLGPGPAHQVGLLGPFDTPQGFL 236
M L GQ+N P PPPA GVL P PA G+L P P G L
Sbjct: 163 MALLGQKNSVSPGILAPPPAPP--GVLAPPPA-PPGVLPPPPAPPGAL 207
>SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 640
Score = 29.5 bits (63), Expect = 5.0
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 10 SHRESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHR 69
SH+E ++ +IP + E + P +G Y + V + +S Y V + V + +
Sbjct: 281 SHKEEPIKQTQIPSKPWETISTDFGGPYPDGHYNLVVID-KRSRYPV-VERVASTSLGPV 338
Query: 70 ESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRV 113
+ +++ + P+ E P G Y +E P+R+
Sbjct: 339 KERMKNIFATYGTPKRVESDNGPPFNSGDYEEFAKEEGFDPHRI 382
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 131 GTLDSLQYCKCVDTPDCNPRPGSARACGSGKY 162
G +D Q+C C + CNP G C SG Y
Sbjct: 181 GGVDCRQHCNCTEWGTCNPFTGKC-LCQSGFY 211
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSESAQRGVL 302
G +Q GP GP G +GP GP+ SA RG L
Sbjct: 488 GDQGEQGPKGSQGPQGPIGALGPRGPKGES-GISALRGCL 526
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 29.5 bits (63), Expect = 5.0
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 10 SHRESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRVQSQAVLTVDVSHR 69
SH+E ++ +IP + E + P +G Y + V + +S Y V + V + +
Sbjct: 1102 SHKEEPIKPTQIPSKPWETISTDFGGPYPDGHYNLVVID-KRSRYPV-VERVPSTSLGPV 1159
Query: 70 ESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRV 113
+ +++ + P+ E P G Y +E P+R+
Sbjct: 1160 KERIKNIFATYGTPKRVESDNGPPFNSGDYEEFAKEEGFDPHRI 1203
>SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23)
Length = 1268
Score = 29.1 bits (62), Expect = 6.7
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 10 SHRESKVQADEIPFREPEETEGFYNRPQGEGRYP-VRVEEHAQSPYRVQSQAVLTVDVSH 68
SH+E ++ +IP + E + P +G Y V +++ ++ P + + V
Sbjct: 944 SHKEEPIKPTQIPSKPWETISTDFGGPYPDGHYNLVVIDKRSRYPVVERVPSTSLGPVKE 1003
Query: 69 RESKVQADEIPFREPEETEGFYNRPQGEGRYPVRVEEHAQSPYRV 113
R + A + P+ E P G Y +E P+R+
Sbjct: 1004 RMKNIFA---TYGTPKRVESDNGPPFNPGDYEEFAKEEGFDPHRI 1045
>SB_47579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 158 GSGKYLCCYK--RKQSNKVNSYQSEYFNEVEDERPMLLPGQQNLARPFPPP 206
GSG Y C K RK+ NKV + + ++ + +L + NL R P
Sbjct: 16 GSGSYGICKKIRRKKDNKVLVWMELDYGQMSETEKQMLVSEVNLLRELKHP 66
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSESA 297
GP + A GPDGP G G DG + + A
Sbjct: 724 GPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDGA 758
>SB_24563| Best HMM Match : Mad3_like (HMM E-Value=0.71)
Length = 235
Score = 28.7 bits (61), Expect = 8.8
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 159 SGKYLCCYKR-KQSNKV--NSYQSEYFNEVEDERPMLLPGQQNLARP-FPPPPASEINGV 214
SGK+ KR K++ K+ Q N V D R QNL + +PPPP + NG+
Sbjct: 147 SGKHNLSEKRHKRTEKIPFEERQKVVNNPVRDLR------YQNLVKTLYPPPPPRDSNGI 200
Query: 215 LGP 217
+ P
Sbjct: 201 MAP 203
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDG 287
GP + Q + GP GP G +G DG
Sbjct: 91 GPPGEPGQVGMAGPPGPPGHVGEDG 115
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 28.7 bits (61), Expect = 8.8
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP-----RDVGFSESAQ 298
GP + A GPDGP G G DG DV +SE Q
Sbjct: 55 GPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDVRYSEQIQ 95
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 28.7 bits (61), Expect = 8.8
Identities = 25/97 (25%), Positives = 33/97 (34%), Gaps = 3/97 (3%)
Query: 197 QNLARPFPPPPASEINGVLGP-GPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXXXXXXX 255
+ L R F S + G GP GP G++GP P+G
Sbjct: 181 EELQRNFTSLVLSGLKGDTGPQGPRGNTGIMGP-KGPKGDTGNKGDQGVQGLRGYNGTQG 239
Query: 256 XXXXXSI-GPNRDQNQAVLVGPDGPTGVIGPDGPRDV 291
I GP + + GP GP G G G + V
Sbjct: 240 PRGNTGIMGPQGPKGDTGITGPKGPKGDTGNKGDQGV 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,163,365
Number of Sequences: 59808
Number of extensions: 491138
Number of successful extensions: 1518
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1241
Number of HSP's gapped (non-prelim): 219
length of query: 401
length of database: 16,821,457
effective HSP length: 84
effective length of query: 317
effective length of database: 11,797,585
effective search space: 3739834445
effective search space used: 3739834445
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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