Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001316-TA|BGIBMGA001316-PA|undefined
(401 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M59217-1|AAA51685.1| 584|Homo sapiens alpha-1 type XIII collage... 35 0.58
BC126412-1|AAI26413.1| 652|Homo sapiens CCDC81 protein protein. 34 0.77
AL138925-2|CAI15452.1| 683|Homo sapiens collagen type XIII alph... 34 0.77
AL138925-1|CAI15451.2| 695|Homo sapiens collagen type XIII alph... 34 0.77
AK131331-1|BAD18491.1| 562|Homo sapiens protein ( Homo sapiens ... 34 0.77
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 33 1.3
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 33 1.3
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 33 1.3
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 1.3
CR457256-1|CAG33537.1| 213|Homo sapiens THAP1 protein. 33 1.3
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 33 1.3
BC021721-1|AAH21721.1| 213|Homo sapiens THAP domain containing,... 33 1.3
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.3
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.3
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 33 1.3
AK001339-1|BAA91635.1| 213|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK223231-1|BAD96951.1| 213|Homo sapiens THAP domain containing,... 33 1.8
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 33 2.4
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 33 2.4
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 33 2.4
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 33 2.4
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 33 2.4
M10956-1|AAA52007.1| 225|Homo sapiens COL5A2 protein. 33 2.4
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 33 2.4
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 33 2.4
BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein. 33 2.4
BC043613-1|AAH43613.1| 503|Homo sapiens COL5A2 protein protein. 33 2.4
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 33 2.4
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 33 2.4
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 33 2.4
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 33 2.4
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 33 2.4
AC133106-1|AAY24185.1| 503|Homo sapiens unknown protein. 33 2.4
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 33 2.4
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 33 2.4
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 33 2.4
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 33 2.4
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 32 4.1
BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2... 32 4.1
BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2... 32 4.1
AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein p... 32 4.1
U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1... 31 5.4
M27396-1|AAA51789.1| 561|Homo sapiens ASNS protein. 31 5.4
M15798-1|AAA36781.1| 540|Homo sapiens protein ( Human ts11 gene... 31 5.4
L35946-1|AAA52756.1| 561|Homo sapiens asparagine synthetase pro... 31 5.4
BT007113-1|AAP35777.1| 561|Homo sapiens asparagine synthetase p... 31 5.4
BC014621-1|AAH14621.1| 561|Homo sapiens asparagine synthetase p... 31 5.4
BC008723-1|AAH08723.1| 561|Homo sapiens asparagine synthetase p... 31 5.4
AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha... 31 5.4
AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha... 31 5.4
AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha... 31 5.4
AC079781-1|AAQ96856.1| 561|Homo sapiens unknown protein. 31 5.4
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 31 7.2
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 31 7.2
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 31 7.2
L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen ... 31 7.2
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 31 7.2
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 31 7.2
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 31 7.2
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 31 7.2
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 31 7.2
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 31 7.2
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 31 7.2
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 31 7.2
AL031177-11|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 31 7.2
AL031177-10|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 31 7.2
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 31 9.5
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 31 9.5
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 9.5
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 31 9.5
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 31 9.5
M63281-1|AAA52038.1| 207|Homo sapiens type II collagen protein. 31 9.5
M27468-1|AAA52039.1| 54|Homo sapiens alpha-1 type II collagen ... 31 9.5
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 31 9.5
J00116-1|AAA51997.1| 456|Homo sapiens COL2A1 protein. 31 9.5
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 31 9.5
AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterat... 31 9.5
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 9.5
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 9.5
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 9.5
AL138925-3|CAI15450.1| 717|Homo sapiens collagen type XIII alph... 31 9.5
AL133063-1|CAB61387.1| 618|Homo sapiens hypothetical protein pr... 31 9.5
AL035669-17|CAI95769.1| 1174|Homo sapiens death inducer-oblitera... 31 9.5
AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen prot... 31 9.5
>M59217-1|AAA51685.1| 584|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.58
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 194 PGQQNLARPFPPPPAS-EINGVLG-PGPAHQVGLLGPFDTP--QGFLXXXXXXXXXXXXX 249
PGQ R FP P ++G G PGP +GL GP P QG
Sbjct: 79 PGQPG-TRGFPGFPGPIGLDGFPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRE 137
Query: 250 XXXXXXXXXXXS--IGPNRDQNQAVLVGPDGPTGVIGPDGP 288
S I +Q+QA + GP GP G GP GP
Sbjct: 138 CLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGP 178
>BC126412-1|AAI26413.1| 652|Homo sapiens CCDC81 protein protein.
Length = 652
Score = 34.3 bits (75), Expect = 0.77
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 132 TLDSLQYCKCVDTPDCNPRPGSARACG----SGKYLC--CYKRKQSNKVNSYQSEYFNEV 185
T +SL Y C+ D +P ++ AC +G+ +C C +R Q N + Y E E+
Sbjct: 291 TPESLSYPSCLKH-DSEMKPQTSPACQDHNKAGQEMCYVCLQRAQRNSLLYYSEERRREI 349
Query: 186 EDER 189
EDER
Sbjct: 350 EDER 353
>AL138925-2|CAI15452.1| 683|Homo sapiens collagen type XIII alpha 1
protein.
Length = 683
Score = 34.3 bits (75), Expect = 0.77
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 194 PGQQNLARPFPPPPAS-EINGVLG-PGPAHQVGLLGPFDTP--QGFLXXXXXXXXXXXXX 249
PGQ R FP P ++G G PGP +GL GP P QG
Sbjct: 162 PGQPG-TRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRE 220
Query: 250 XXXXXXXXXXXS--IGPNRDQNQAVLVGPDGPTGVIGPDGP 288
S I +Q+QA + GP GP G GP GP
Sbjct: 221 CLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGP 261
>AL138925-1|CAI15451.2| 695|Homo sapiens collagen type XIII alpha 1
protein.
Length = 695
Score = 34.3 bits (75), Expect = 0.77
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 194 PGQQNLARPFPPPPAS-EINGVLG-PGPAHQVGLLGPFDTP--QGFLXXXXXXXXXXXXX 249
PGQ R FP P ++G G PGP +GL GP P QG
Sbjct: 162 PGQPG-TRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRE 220
Query: 250 XXXXXXXXXXXS--IGPNRDQNQAVLVGPDGPTGVIGPDGP 288
S I +Q+QA + GP GP G GP GP
Sbjct: 221 CLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGP 261
>AK131331-1|BAD18491.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ16339 fis, clone TESTI2008901. ).
Length = 562
Score = 34.3 bits (75), Expect = 0.77
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 132 TLDSLQYCKCVDTPDCNPRPGSARACG----SGKYLC--CYKRKQSNKVNSYQSEYFNEV 185
T +SL Y C+ D +P ++ AC +G+ +C C +R Q N + Y E E+
Sbjct: 201 TPESLSYPSCLKH-DSEMKPQTSPACQDHNKAGQEMCYVCLQRAQRNSLLYYSEERRREI 259
Query: 186 EDER 189
EDER
Sbjct: 260 EDER 263
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 701 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 759
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 760 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 802
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 701 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 759
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 760 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 802
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 701 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 759
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 760 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 802
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 620 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 678
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 679 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 721
>CR457256-1|CAG33537.1| 213|Homo sapiens THAP1 protein.
Length = 213
Score = 33.5 bits (73), Expect = 1.3
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 165 CYKRKQSNKV---NSYQSEYF-NEVEDERPMLLPGQQNLARPFPPPPASEINGVLG 216
C+KR+ +NK+ N+ + + E D++ LL Q+ L P PPP S+++ +G
Sbjct: 62 CFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIG 117
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 309 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 367
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 368 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 410
>BC021721-1|AAH21721.1| 213|Homo sapiens THAP domain containing,
apoptosis associated protein 1 protein.
Length = 213
Score = 33.5 bits (73), Expect = 1.3
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 165 CYKRKQSNKV---NSYQSEYF-NEVEDERPMLLPGQQNLARPFPPPPASEINGVLG 216
C+KR+ +NK+ N+ + + E D++ LL Q+ L P PPP S+++ +G
Sbjct: 62 CFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIG 117
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 701 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 759
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 760 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 802
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 701 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 759
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 760 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 802
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.5 bits (73), Expect = 1.3
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 194 PGQQNLARPFPPPPAS--EINGVLG-PGPAHQVGLLGPFDTPQGFLXXXXXXXXXXXXXX 250
PG + P PP P I G G PG ++GL GP P GF
Sbjct: 701 PGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGP-PGPPGFPGPKGEPGFALPGPP 759
Query: 251 XXXXXXXXXXSIGPNRDQNQAVLVGPDGPTGVIGPDGPR-DVG 292
++GP D+ GP G TG+ G GP+ DVG
Sbjct: 760 GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVG 802
>AK001339-1|BAA91635.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ10477 fis, clone NT2RP2000097. ).
Length = 213
Score = 33.5 bits (73), Expect = 1.3
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 165 CYKRKQSNKV---NSYQSEYF-NEVEDERPMLLPGQQNLARPFPPPPASEINGVLG 216
C+KR+ +NK+ N+ + + E D++ LL Q+ L P PPP S+++ +G
Sbjct: 62 CFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQLPPPPLPPPVSQVDAAIG 117
>AK223231-1|BAD96951.1| 213|Homo sapiens THAP domain containing,
apoptosis associated protein 1 isoform 1 variant
protein.
Length = 213
Score = 33.1 bits (72), Expect = 1.8
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 165 CYKRKQSNKV---NSYQSEYF-NEVEDERPMLLPGQQNLARPFPPPPASEINGVLG 216
C+KR+ +NK+ N+ + + E D + LL Q+ L P PPP S+++ +G
Sbjct: 62 CFKRECNNKLLKENAVPTIFLCTEPHDRKEDLLEPQEQLPPPPLPPPVSQVDAAIG 117
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSES 296
GP A VGP GP G GP GP GF S
Sbjct: 1166 GPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFS 1199
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 1155 GPNGEQGSAGIPGPFGPRGPPGPVGP 1180
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP + QA GP GP G IGP GP
Sbjct: 54 GPPGEPGQAGPSGPPGPPGAIGPSGP 79
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP + QA GP GP G IGP GP
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGP 226
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 758 GPNGEQGSAGIPGPFGPRGPPGPVGP 783
>M10956-1|AAA52007.1| 225|Homo sapiens COL5A2 protein.
Length = 225
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 154 GPNGEQGSAGIPGPFGPRGPPGPVGP 179
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 32.7 bits (71), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGF 293
GP ++ ++GP GP G+ GP GP GF
Sbjct: 1872 GPKGERGAPGILGPQGPPGLPGPVGPPGQGF 1902
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSES 296
GP A VGP GP G GP GP GF S
Sbjct: 742 GPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFS 775
>BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein.
Length = 1139
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 798 GPNGEQGSAGIPGPFGPRGPPGPVGP 823
>BC043613-1|AAH43613.1| 503|Homo sapiens COL5A2 protein protein.
Length = 503
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 162 GPNGEQGSAGIPGPFGPRGPPGPVGP 187
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSES 296
GP A VGP GP G GP GP GF S
Sbjct: 1166 GPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFS 1199
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP + QA GP GP G IGP GP
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGP 226
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP + QA GP GP G IGP GP
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGP 226
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen alpha
2 chain protein.
Length = 1347
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 1006 GPNGEQGSAGIPGPFGPRGPPGPVGP 1031
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSES 296
GP A VGP GP G GP GP GF S
Sbjct: 1163 GPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFS 1196
>AC133106-1|AAY24185.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 162 GPNGEQGSAGIPGPFGPRGPPGPVGP 187
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP + QA GP GP G IGP GP
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGP 226
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 32.7 bits (71), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGF 293
GP ++ ++GP GP G+ GP GP GF
Sbjct: 511 GPKGERGAPGILGPQGPPGLPGPVGPPGQGF 541
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPRDVGFSES 296
GP A VGP GP G GP GP GF S
Sbjct: 1169 GPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFS 1202
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GPN +Q A + GP GP G GP GP
Sbjct: 1161 GPNGEQGSAGIPGPFGPRGPPGPVGP 1186
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 31.9 bits (69), Expect = 4.1
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 60 AVLTVDVSHRESKVQADEIPFREPEETEGFYNRPQG-EGRYPVRVEEHAQSPYRVQSQAV 118
AV+ V S+RE QADE+P + F R G EGR +VE+ ++ + S
Sbjct: 120 AVVNVTYSNREQTRQADEVPLKILAH-NNFVGRLIGKEGRNLKKVEQDTETKITISSLQD 178
Query: 119 LTVDVPK 125
LT+ P+
Sbjct: 179 LTLYNPE 185
>BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 31.9 bits (69), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
G D+ Q GP GP G++GP GPR
Sbjct: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPR 241
>BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 31.9 bits (69), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
G D+ Q GP GP G++GP GPR
Sbjct: 215 GSKGDRGQTGEKGPAGPPGLLGPPGPR 241
>AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein
protein.
Length = 441
Score = 31.9 bits (69), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
G D+ Q GP GP G++GP GPR
Sbjct: 217 GSKGDRGQTGEKGPAGPPGLLGPPGPR 243
>U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1
protein.
Length = 3063
Score = 31.5 bits (68), Expect = 5.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
GP ++ + +GP GP G IGP GP+
Sbjct: 2762 GPRGERGISGAIGPPGPRGDIGPPGPQ 2788
>M27396-1|AAA51789.1| 561|Homo sapiens ASNS protein.
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 502 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 561
>M15798-1|AAA36781.1| 540|Homo sapiens protein ( Human ts11 gene
encoding a G-1 progression protein. ).
Length = 540
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 481 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 540
>L35946-1|AAA52756.1| 561|Homo sapiens asparagine synthetase
protein.
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 502 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 561
>BT007113-1|AAP35777.1| 561|Homo sapiens asparagine synthetase
protein.
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 502 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 561
>BC014621-1|AAH14621.1| 561|Homo sapiens asparagine synthetase
protein.
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 502 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 561
>BC008723-1|AAH08723.1| 561|Homo sapiens asparagine synthetase
protein.
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 502 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 561
>AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 31.5 bits (68), Expect = 5.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
GP ++ + +GP GP G IGP GP+
Sbjct: 2762 GPRGERGISGAIGPPGPRGDIGPPGPQ 2788
>AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 31.5 bits (68), Expect = 5.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
GP ++ + +GP GP G IGP GP+
Sbjct: 2762 GPRGERGISGAIGPPGPRGDIGPPGPQ 2788
>AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 31.5 bits (68), Expect = 5.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGPR 289
GP ++ + +GP GP G IGP GP+
Sbjct: 2762 GPRGERGISGAIGPPGPRGDIGPPGPQ 2788
>AC079781-1|AAQ96856.1| 561|Homo sapiens unknown protein.
Length = 561
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 18 ADEIPFREPEETEGFYNRPQGEGRYPVRVE--EHAQSPYRVQSQAVLTVDVSHRESKVQA 75
A + PF P+ EG+Y R E YP R + H P + + ++H +S V+A
Sbjct: 502 AQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA 561
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 202 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 228
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen
protein.
Length = 542
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 198 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 224
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 202 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 228
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 202 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 228
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 202 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 228
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 202 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 228
>AL031177-11|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 203 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 229
>AL031177-10|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 273 LVGPDGPTGVIGPDGPRDVGFSESAQRGV 301
L GP GP G +GPDG +GF ++GV
Sbjct: 202 LQGPPGPPGPLGPDGNMGLGF--QGEKGV 228
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 1077 GPSGDQGASGPAGPSGPRGPPGPVGP 1102
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 1077 GPSGDQGASGPAGPSGPRGPPGPVGP 1102
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 646 GPSGDQGASGPAGPSGPRGPPGPVGP 671
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 30.7 bits (66), Expect = 9.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 262 IGPNRDQNQAVLVGPDG---PTGVIGPDGP 288
IGP + L GPDG P G+ GPDGP
Sbjct: 737 IGPRGSKGAVGLPGPDGSPGPIGLPGPDGP 766
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 30.7 bits (66), Expect = 9.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 267 DQNQAVLVGPDGPTGVIGPDGP 288
+Q+QA + GP GP G GP GP
Sbjct: 169 EQSQASIQGPPGPPGPPGPSGP 190
>M63281-1|AAA52038.1| 207|Homo sapiens type II collagen protein.
Length = 207
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 65 GPSGDQGASGPAGPSGPRGPPGPVGP 90
>M27468-1|AAA52039.1| 54|Homo sapiens alpha-1 type II collagen
protein.
Length = 54
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 1 GPSGDQGASGPAGPSGPRGPPGPVGP 26
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 1146 GPSGDQGASGPAGPSGPRGPPGPVGP 1171
>J00116-1|AAA51997.1| 456|Homo sapiens COL2A1 protein.
Length = 456
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 115 GPSGDQGASGPAGPSGPRGPPGPVGP 140
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 263 GPNRDQNQAVLVGPDGPTGVIGPDGP 288
GP+ DQ + GP GP G GP GP
Sbjct: 1146 GPSGDQGASGPAGPSGPRGPPGPVGP 1171
>AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterator-3
protein.
Length = 2240
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 194 PGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGP----FDTPQG 234
P L P PP S+ G GP P H VG GP F+T +G
Sbjct: 1895 PLLSQLKGPRGGPPPSQFGGQRGPPPGHFVGPRGPHPSQFETARG 1939
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 9.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 262 IGPNRDQNQAVLVGPDG---PTGVIGPDGP 288
IGP + L GPDG P G+ GPDGP
Sbjct: 737 IGPRGSKGAVGLPGPDGSPGPIGLPGPDGP 766
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 9.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 262 IGPNRDQNQAVLVGPDG---PTGVIGPDGP 288
IGP + L GPDG P G+ GPDGP
Sbjct: 737 IGPRGSKGAVGLPGPDGSPGPIGLPGPDGP 766
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 9.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 262 IGPNRDQNQAVLVGPDG---PTGVIGPDGP 288
IGP + L GPDG P G+ GPDGP
Sbjct: 737 IGPRGSKGAVGLPGPDGSPGPIGLPGPDGP 766
>AL138925-3|CAI15450.1| 717|Homo sapiens collagen type XIII alpha 1
protein.
Length = 717
Score = 30.7 bits (66), Expect = 9.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 267 DQNQAVLVGPDGPTGVIGPDGP 288
+Q+QA + GP GP G GP GP
Sbjct: 262 EQSQASIQGPPGPPGPPGPSGP 283
>AL133063-1|CAB61387.1| 618|Homo sapiens hypothetical protein
protein.
Length = 618
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 194 PGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGP----FDTPQG 234
P L P PP S+ G GP P H VG GP F+T +G
Sbjct: 273 PLLSQLKGPRGGPPPSQFGGQRGPPPGHFVGPRGPHPSQFETARG 317
>AL035669-17|CAI95769.1| 1174|Homo sapiens death inducer-obliterator
1 protein.
Length = 1174
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 194 PGQQNLARPFPPPPASEINGVLGPGPAHQVGLLGP----FDTPQG 234
P L P PP S+ G GP P H VG GP F+T +G
Sbjct: 829 PLLSQLKGPRGGPPPSQFGGQRGPPPGHFVGPRGPHPSQFETARG 873
>AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen
protein.
Length = 717
Score = 30.7 bits (66), Expect = 9.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 267 DQNQAVLVGPDGPTGVIGPDGP 288
+Q+QA + GP GP G GP GP
Sbjct: 262 EQSQASIQGPPGPPGPPGPSGP 283
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,143,379
Number of Sequences: 224733
Number of extensions: 2300103
Number of successful extensions: 13014
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 11247
Number of HSP's gapped (non-prelim): 1789
length of query: 401
length of database: 73,234,838
effective HSP length: 92
effective length of query: 309
effective length of database: 52,559,402
effective search space: 16240855218
effective search space used: 16240855218
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 66 (30.7 bits)
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