Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001315-TA|BGIBMGA001315-PA|IPR006578|MADF,
IPR004210|BESS motif
         (232 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.2  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   6.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   6.2  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   6.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 10  EAIELIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVN 57
           + IE + ++R R  + +R   E  +KY   +    +C+  D + HR++
Sbjct: 177 QTIEFVSIIRNRFVILNRYIEESISKYKHAELVMPLCKSCDLH-HRLS 223


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 98  ALEFLDAVFVYKTKSSQKVDSRLSDEDNATEDSIEWLNE 136
           AL+  DA  V    + +       DEDN  +D  +W  E
Sbjct: 4   ALQTADAAPVRYGPTERWQRLSFDDEDNLPKDPRQWTRE 42


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 15/53 (28%), Positives = 22/53 (41%)

Query: 159 DENSIAHFLMNLVQREENEDRAFFTSITSAVSSLSERSKFEFRVQVLKLLNSL 211
           +EN + +     V R E       T +T+ V   SER  F  R+  +   N L
Sbjct: 481 EENPLINVTWKPVTRNEMNFLDIGTKLTTGVDPDSERMAFWQRILKINPNNKL 533


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 98  ALEFLDAVFVYKTKSSQKVDSRLSDEDNATEDSIEWLNE 136
           AL+  DA  V    + +       DEDN  +D  +W  E
Sbjct: 4   ALQTADAAPVRYGPTERWQRLSFDDEDNLPKDPRQWTRE 42


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 111 KSSQKVDSRLSDEDNATED 129
           K  ++V+ RLSD D+  E+
Sbjct: 23  KEDEEVEHRLSDRDDDDEN 41


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.130    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,169
Number of Sequences: 317
Number of extensions: 1840
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 232
length of database: 114,650
effective HSP length: 55
effective length of query: 177
effective length of database: 97,215
effective search space: 17207055
effective search space used: 17207055
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)