GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001315-TA|BGIBMGA001315-PA|IPR006578|MADF,
IPR004210|BESS motif
         (232 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        28   0.20 
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    23   5.8  
AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione S-tran...    23   5.8  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   7.7  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 33 RNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKKW 72
          RN   R +  +E+ +  +P  HR +  + NK+VLL S KW
Sbjct: 46 RNGDKRSRMIKELYQQTEPKSHRPS--YANKAVLLSSAKW 83


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)

Query: 36  YDRLKAWEEICEVL 49
           Y RL AW E C VL
Sbjct: 180 YPRLNAWYESCRVL 193


>AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione
           S-transferase D8 protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 34  NKYDRLKAWEEICEVLDPNFHRVN 57
           +KY  + AW E C+    +F  +N
Sbjct: 175 SKYPAISAWYEGCKATMADFQEIN 198


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 30  TEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLL 67
           T+ +   D+LK  +E+    +  +  +N  +KNK  LL
Sbjct: 310 TQKKLNLDQLKMIQEVSTRWNSGYDMLNRFYKNKIALL 347


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.130    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,933
Number of Sequences: 2123
Number of extensions: 7308
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 4
length of query: 232
length of database: 516,269
effective HSP length: 62
effective length of query: 170
effective length of database: 384,643
effective search space: 65389310
effective search space used: 65389310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)