Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001315-TA|BGIBMGA001315-PA|IPR006578|MADF,
IPR004210|BESS motif
(232 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81449-3|CAB03761.1| 300|Caenorhabditis elegans Hypothetical pr... 37 0.014
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 37 0.014
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z32679-9|CAA83593.3| 337|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF043698-4|AAB97560.1| 275|Caenorhabditis elegans Hypothetical ... 29 2.1
AF043698-3|AAK68268.1| 268|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006626-1|AAF39788.1| 171|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 29 2.8
Z83219-6|CAB05696.5| 351|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 28 5.0
AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical ... 28 6.5
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 8.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 8.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 8.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 8.7
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 8.7
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 27 8.7
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 27 8.7
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 27 8.7
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81449-3|CAB03761.1| 300|Caenorhabditis elegans Hypothetical
protein C46F11.3 protein.
Length = 300
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 13 ELIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKKW 72
++I VR+R LWD+R +RN +AW+++ L+ + K + W
Sbjct: 135 DIIYAVRKRPILWDQRLICHRNSNLSRRAWDQL--DLELGIDEEYPLARRKQI------W 186
Query: 73 TNIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVYKT 110
+ RD +V ++ ++ +I+A+ALEF + ++T
Sbjct: 187 KSKRDYFVSAVNAA--NLRKWIYADALEFYRPMINFRT 222
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 36.7 bits (81), Expect = 0.014
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 12 IELIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKK 71
+ LI VR +CL+D +YRN + + W+ + VL F + ++S +
Sbjct: 8 LRLIEAVRHSRCLFDNTDRQYRNTEYKNRVWQRLVTVL--GF--------DGDPRMLSAR 57
Query: 72 WTNIRDAYVKSLRMGR--NRVKPYIHAEALEFLD 103
W +RD Y K R + N + + + L FLD
Sbjct: 58 WKQLRDKYGKEKRKQKYGNEKSSWQYFKHLHFLD 91
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 14 LIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKKWT 73
LI VR CL+D R +YR+ R +AW I + L +V + K+W
Sbjct: 123 LILEVRRHPCLYDVRDPKYRHGDCRTQAWGMIIDKL----------RYPGTVPSIYKQWK 172
Query: 74 NIRDAYVKSLRMGRNRVKPYI 94
RD YV+ R RN P +
Sbjct: 173 KHRDRYVREKRRLRNLGDPNV 193
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 14 LIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKKWT 73
LI VR+ CL++ + +R + WE I + +DPN + K+W
Sbjct: 11 LINEVRKYPCLYNHSRRGSGDTMERQRLWESIAKNIDPNC----------AAEFAKKRWL 60
Query: 74 NIRDAYVKSLRM 85
+RD Y K L++
Sbjct: 61 QLRDRYRKELKI 72
>Z32679-9|CAA83593.3| 337|Caenorhabditis elegans Hypothetical
protein C05B5.5 protein.
Length = 337
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 12 IELIGLVRERKCLWDRRCTEYRNKYDRLKAW-EEICEVLDPNFHRVNNKHKNKSVLLMSK 70
+E +G+VR + L++ C+ N++D K + + L PN + NK + + + K
Sbjct: 192 LEKMGVVRNLRLLFN--CSTKDNEFDCEKEYYNSETDKLMPNDWYLYNKFDDIDLNVFLK 249
Query: 71 KWTNIRDAYVKSLRMGRNR 89
W N RD ++ R+ R
Sbjct: 250 NWLNFRDPLIRKFRIRGKR 268
>AF043698-4|AAB97560.1| 275|Caenorhabditis elegans Hypothetical
protein C54G6.1a protein.
Length = 275
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 13 ELIGLVRERKCLWDR-RCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKK 71
EL+ +V+E +WD+ RC ++ +AW I L + + + H K L KK
Sbjct: 102 ELLDMVKEEPSIWDKIRCVDFGCHQRMRQAWCSISLKLG-GWGAIQHVHMLKQ--LYRKK 158
Query: 72 WTNIRDAY-VKSLRMGRNRVKPYIHAEALEFLDAV 105
RD Y V+ LR GR + + E L FL V
Sbjct: 159 ----RDLYNVQYLRSGRE----FEYCEKLSFLKDV 185
>AF043698-3|AAK68268.1| 268|Caenorhabditis elegans Hypothetical
protein C54G6.1b protein.
Length = 268
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 13 ELIGLVRERKCLWDR-RCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKK 71
EL+ +V+E +WD+ RC ++ +AW I L + + + H K L KK
Sbjct: 95 ELLDMVKEEPSIWDKIRCVDFGCHQRMRQAWCSISLKLG-GWGAIQHVHMLKQ--LYRKK 151
Query: 72 WTNIRDAY-VKSLRMGRNRVKPYIHAEALEFLDAV 105
RD Y V+ LR GR + + E L FL V
Sbjct: 152 ----RDLYNVQYLRSGRE----FEYCEKLSFLKDV 178
>AC006626-1|AAF39788.1| 171|Caenorhabditis elegans Hypothetical
protein CC8.1 protein.
Length = 171
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 173 REENEDRAFFTSITSAVSSLSERSKFEFRVQVLKLL 208
REE ED F I+ +S L R+K ++QVLK +
Sbjct: 126 REEEEDEIFARMISIKLSKLDARTKEVAKLQVLKAI 161
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 68 MSKKWTNIRDAYVKSLRMGRNRV------KPYIHAEALEFLDAVFVYKTKSSQKVDSRLS 121
+ +KW ++RD YV+ + + + K Y + + FLD ++ + QK D S
Sbjct: 66 LERKWKHMRDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQK-DYLNS 124
Query: 122 DEDNATEDSIEWLNEVYVDE 141
+ + +D +L+ + V E
Sbjct: 125 NTPDFLDDDTAFLDGLSVKE 144
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 68 MSKKWTNIRDAYVKSLRMGRNRV------KPYIHAEALEFLDAVFVYKTKSSQKVDSRLS 121
+ +KW ++RD YV+ + + + K Y + + FLD ++ + QK D S
Sbjct: 66 LERKWKHMRDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQK-DYLNS 124
Query: 122 DEDNATEDSIEWLNEVYVDE 141
+ + +D +L+ + V E
Sbjct: 125 NTPDFLDDDTAFLDGLSVKE 144
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 14/95 (14%)
Query: 12 IELIGLVRERKCLWDRRCTEYRNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKK 71
I LI V+ R L+D+ Y R AW EI E L+ ++H + +
Sbjct: 51 IRLIAEVKARPFLYDQSDEGYNLLSWRNSAWNEIAENLE-----TTSEH-------VKTR 98
Query: 72 WTNIRDAYVKSLRMGR--NRVKPYIHAEALEFLDA 104
W +RD Y K + R + ++ L+F+ A
Sbjct: 99 WKTLRDRYKKEEKKERVSKKASSWVFQRPLKFIQA 133
>Z83219-6|CAB05696.5| 351|Caenorhabditis elegans Hypothetical
protein C31C9.4 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 36 YDRLKAWEEICEV-LD---PNFHRVNNKHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVK 91
YD L EE+ ++ LD P + L +W N + A+++S + R ++
Sbjct: 205 YDILDCLEEVTDISLDLYQPYLEGMRRVTDGMEDLFELDQWKNAKTAHIESTKYFRTEIE 264
Query: 92 PYIHAEAL 99
++H E++
Sbjct: 265 HFLHFESI 272
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 53 FHRVNNKHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVYKTKS 112
F +N+ NK + ++ ++WT +A +KS+ + +++ E++ F + +K +
Sbjct: 208 FRIINSSFTNKELNILIRQWTEGSNACLKSIDISFSQIITSRFDESVLFKGVGYTWKEEV 267
Query: 113 SQKVDS-RLSDEDNATEDSIEWLN 135
K S LS N + I LN
Sbjct: 268 RPKKRSISLSVLSNRIKQLIAMLN 291
>AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical
protein R155.4 protein.
Length = 873
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 174 EENEDRAFFTSITSAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNIFD 228
E +++ F ++ + + +L+ SKF +++K +N L+ KD+S ++R I D
Sbjct: 412 ESDKNLTLFKALITDMETLT--SKFVALNEMVKTINDLKKKDNSDALQRMSTIVD 464
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 2699 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 2738
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 3228 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 3267
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 2909 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 2948
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 2699 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 2738
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 3228 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 3267
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 2909 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 2948
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 187 SAVSSLSERSKFEFRVQVLKLLNSLRMKDSSMGVKRERNI 226
+ V +L E SK+EFR++ DS+ V + RN+
Sbjct: 2118 ATVGNLKEGSKYEFRIRAKNKAGLGDPSDSASAVAKARNV 2157
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 59 KHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVYKTKSSQKVDS 118
K++N++ + ++ R+ KS + +KP +A+ + L A F+++TK K+D
Sbjct: 748 KNRNRATI-RRPGYSRKRNEMEKSGGHDDDSLKPLTYADIITRLVARFIHQTKKDMKMDG 806
Query: 119 RLSDEDNATEDSIEWL 134
D+ + + I L
Sbjct: 807 VNEDDLHEIKQDISSL 822
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 59 KHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVYKTKSSQKVDS 118
K++N++ + ++ R+ KS + +KP +A+ + L A F+++TK K+D
Sbjct: 728 KNRNRATI-RRPGYSRKRNEMEKSGGHDDDSLKPLTYADIITRLVARFIHQTKKDMKMDG 786
Query: 119 RLSDEDNATEDSIEWL 134
D+ + + I L
Sbjct: 787 VNEDDLHEIKQDISSL 802
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 59 KHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVYKTKSSQKVDS 118
K++N++ + ++ R+ KS + +KP +A+ + L A F+++TK K+D
Sbjct: 728 KNRNRATI-RRPGYSRKRNEMEKSGGHDDDSLKPLTYADIITRLVARFIHQTKKDMKMDG 786
Query: 119 RLSDEDNATEDSIEWL 134
D+ + + I L
Sbjct: 787 VNEDDLHEIKQDISSL 802
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 33 RNKYDRLKAWEEICEVLDPNFHRVNNKHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVKP 92
+NK + K W+++ + + R+ K NK M +K++ +K + +
Sbjct: 315 KNKQEPPKRWQQVIQEIKDESFRIKGKKNNKE--RMKRKFSKFVST-MKEAGLNPRKALN 371
Query: 93 YIHAEALEFLDAVFVYK---TKSSQKVDSRLSDEDNATEDSIEWLNE 136
+ E L D + K K ++++ R+S +D + I+ + E
Sbjct: 372 TMGMEDLFEDDPILSEKEMDLKDRKEMEERMSPDDKIMHEPIKLIRE 418
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.130 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,173,693
Number of Sequences: 27539
Number of extensions: 194137
Number of successful extensions: 629
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 612
Number of HSP's gapped (non-prelim): 27
length of query: 232
length of database: 12,573,161
effective HSP length: 79
effective length of query: 153
effective length of database: 10,397,580
effective search space: 1590829740
effective search space used: 1590829740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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