Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001314-TA|BGIBMGA001314-PA|undefined
(188 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052946-1|AAH52946.1| 837|Homo sapiens neural cell adhesion mo... 34 0.34
U75330-1|AAB80803.1| 837|Homo sapiens neural cell adhesion prot... 33 0.60
BC130281-1|AAI30282.1| 1222|Homo sapiens CCDC108 protein protein. 30 4.2
BC112065-1|AAI12066.1| 374|Homo sapiens potassium channel, subf... 30 4.2
BC112063-1|AAI12064.1| 374|Homo sapiens potassium channel, subf... 30 4.2
BC075080-1|AAH75080.1| 374|Homo sapiens potassium channel, subf... 30 4.2
BC075079-1|AAH75079.1| 374|Homo sapiens potassium channel, subf... 30 4.2
AY190605-1|AAO38739.1| 374|Homo sapiens breast cancer amplified... 30 4.2
AK125957-1|BAC86362.1| 1215|Homo sapiens protein ( Homo sapiens ... 30 4.2
AF279809-1|AAF85982.1| 374|Homo sapiens 2P domain potassium cha... 30 4.2
AF257080-1|AAG33126.1| 374|Homo sapiens two pore potassium chan... 30 4.2
AF248241-1|AAG31730.1| 374|Homo sapiens 2P domain potassium cha... 30 4.2
AF212829-1|AAF63708.1| 374|Homo sapiens potassium channel TASK3... 30 4.2
AF065163-1|AAG29340.1| 394|Homo sapiens Kcnk3 channel protein. 30 4.2
AF006823-1|AAC51777.1| 394|Homo sapiens TWIK-related acid-sensi... 30 4.2
AC015977-1|AAY24312.1| 394|Homo sapiens unknown protein. 30 4.2
EF165335-1|ABM47414.1| 426|Homo sapiens K2P2.1 potassium channe... 29 7.4
EF165334-1|ABM47413.1| 426|Homo sapiens K2P2.1 potassium channe... 29 7.4
BC101695-1|AAI01696.1| 411|Homo sapiens potassium channel, subf... 29 7.4
BC101693-1|AAI01694.1| 411|Homo sapiens potassium channel, subf... 29 7.4
BC069462-1|AAH69462.1| 411|Homo sapiens potassium channel, subf... 29 7.4
AY552981-1|AAT49016.1| 228|Homo sapiens tandem-pore-domain pota... 29 7.4
AY552980-1|AAT49015.1| 422|Homo sapiens tandem-pore-domain pota... 29 7.4
AK123409-1|BAC85609.1| 152|Homo sapiens protein ( Homo sapiens ... 29 7.4
AF171068-1|AAF89743.1| 411|Homo sapiens two-pore domain potassi... 29 7.4
AF129399-1|AAD47569.1| 411|Homo sapiens TREK-1 potassium channe... 29 7.4
AF004711-1|AAD01203.1| 426|Homo sapiens two-pore potassium chan... 29 7.4
>BC052946-1|AAH52946.1| 837|Homo sapiens neural cell adhesion
molecule 2 protein.
Length = 837
Score = 33.9 bits (74), Expect = 0.34
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 124 LEMKVRGWDGNESTHHIQWTFTGALFYSI-IVITTIAGYSAIVVYEFSIEYKPGL 177
LE KV+G + H+QWT + Y + I GYS VYEFS+ KP +
Sbjct: 640 LEKKVQGNKDHIILEHLQWT----MGYEVQITAANRLGYSEPTVYEFSMPPKPNI 690
>U75330-1|AAB80803.1| 837|Homo sapiens neural cell adhesion protein
protein.
Length = 837
Score = 33.1 bits (72), Expect = 0.60
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 124 LEMKVRGWDGNESTHHIQWTFTGALFYSIIVITTIAGYSAIVVYEFSIEYKPGL 177
LE KV+G + H+QWT G F + GYS VYEFS+ KP +
Sbjct: 640 LEKKVQGNKDHIILEHLQWTM-GMKFR--LPAANRLGYSEPTVYEFSMPPKPNI 690
>BC130281-1|AAI30282.1| 1222|Homo sapiens CCDC108 protein protein.
Length = 1222
Score = 30.3 bits (65), Expect = 4.2
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 116 KDFENAILLEMKVRGWDGNESTHHIQWTFTG--ALFYSIIVITTIAGYSAIVVYEFSIEY 173
K+F++ I + +G ST + W F+ A Y++ V I G+++ +++ + Y
Sbjct: 643 KNFDHPIFCCLNPKGEIQPGSTARVLWIFSPIEAKTYTVDVPIHILGWNSALIHFQGVGY 702
Query: 174 KPGLSGHTA 182
P + G TA
Sbjct: 703 NPHMMGDTA 711
>BC112065-1|AAI12066.1| 374|Homo sapiens potassium channel,
subfamily K, member 9 protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>BC112063-1|AAI12064.1| 374|Homo sapiens potassium channel,
subfamily K, member 9 protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>BC075080-1|AAH75080.1| 374|Homo sapiens potassium channel,
subfamily K, member 9 protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>BC075079-1|AAH75079.1| 374|Homo sapiens potassium channel,
subfamily K, member 9 protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>AY190605-1|AAO38739.1| 374|Homo sapiens breast cancer amplified
potassium channel protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>AK125957-1|BAC86362.1| 1215|Homo sapiens protein ( Homo sapiens
cDNA FLJ43969 fis, clone TESTI4017575. ).
Length = 1215
Score = 30.3 bits (65), Expect = 4.2
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 116 KDFENAILLEMKVRGWDGNESTHHIQWTFTG--ALFYSIIVITTIAGYSAIVVYEFSIEY 173
K+F++ I + +G ST + W F+ A Y++ V I G+++ +++ + Y
Sbjct: 636 KNFDHPIFCCLNPKGEIQPGSTARVLWIFSPIEAKTYTVDVPIHILGWNSALIHFQGVGY 695
Query: 174 KPGLSGHTA 182
P + G TA
Sbjct: 696 NPHMMGDTA 704
>AF279809-1|AAF85982.1| 374|Homo sapiens 2P domain potassium
channel Task-3 protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>AF257080-1|AAG33126.1| 374|Homo sapiens two pore potassium channel
KT3.2 protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>AF248241-1|AAG31730.1| 374|Homo sapiens 2P domain potassium
channel protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>AF212829-1|AAF63708.1| 374|Homo sapiens potassium channel TASK3
protein.
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWKFAGSFYFAITVITTI-GY 96
>AF065163-1|AAG29340.1| 394|Homo sapiens Kcnk3 channel protein.
Length = 394
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWRFAGSFYFAITVITTI-GY 96
>AF006823-1|AAC51777.1| 394|Homo sapiens TWIK-related
acid-sensitive K+ channel protein.
Length = 394
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWRFAGSFYFAITVITTI-GY 96
>AC015977-1|AAY24312.1| 394|Homo sapiens unknown protein.
Length = 394
Score = 30.3 bits (65), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 140 IQWTFTGALFYSIIVITTIAGY 161
+QW F G+ +++I VITTI GY
Sbjct: 76 VQWRFAGSFYFAITVITTI-GY 96
>EF165335-1|ABM47414.1| 426|Homo sapiens K2P2.1 potassium channel
protein.
Length = 426
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 59 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 88
>EF165334-1|ABM47413.1| 426|Homo sapiens K2P2.1 potassium channel
protein.
Length = 426
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 59 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 88
>BC101695-1|AAI01696.1| 411|Homo sapiens potassium channel,
subfamily K, member 2 protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 44 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 73
>BC101693-1|AAI01694.1| 411|Homo sapiens potassium channel,
subfamily K, member 2 protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 44 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 73
>BC069462-1|AAH69462.1| 411|Homo sapiens potassium channel,
subfamily K, member 2 protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 44 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 73
>AY552981-1|AAT49016.1| 228|Homo sapiens tandem-pore-domain
potassium channel TREK-1 splice variant e protein.
Length = 228
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 55 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 84
>AY552980-1|AAT49015.1| 422|Homo sapiens tandem-pore-domain
potassium channel TREK-1 splice variant c protein.
Length = 422
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 55 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 84
>AK123409-1|BAC85609.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ41415 fis, clone BRHIP2001805, moderately
similar to Homo sapiens TREK-1 potassium channel
(KCNK2) mRNA. ).
Length = 152
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 55 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 84
>AF171068-1|AAF89743.1| 411|Homo sapiens two-pore domain
potassium channel TREK-1 protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 44 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 73
>AF129399-1|AAD47569.1| 411|Homo sapiens TREK-1 potassium channel
protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 44 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 73
>AF004711-1|AAD01203.1| 426|Homo sapiens two-pore potassium
channel TPKC1 protein.
Length = 426
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 29 WKLCSVVFSHFVMISLVVAYCILGAVIFEKLEAEHE 64
WK S +F +VV Y I+GA +F+ LE HE
Sbjct: 59 WKTVSTIFL------VVVLYLIIGATVFKALEQPHE 88
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.135 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,831,404
Number of Sequences: 224733
Number of extensions: 1078194
Number of successful extensions: 2512
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2464
Number of HSP's gapped (non-prelim): 61
length of query: 188
length of database: 73,234,838
effective HSP length: 86
effective length of query: 102
effective length of database: 53,907,800
effective search space: 5498595600
effective search space used: 5498595600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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