Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001314-TA|BGIBMGA001314-PA|undefined
(188 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.8
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 4.2
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 5.6
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 5.6
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 434 RLCLIVFTLFTVLATIVILC 453
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 434 RLCLIVFTLFTVLATIVILC 453
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 434 RLCLIVFTLFTVLATIVILC 453
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 434 RLCLIVFTLFTVLATIVILC 453
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 434 RLCLIVFTLFTVLATIVILC 453
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 434 RLCLIVFTLFTVLATIVILC 453
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 502 RLCLIVFTLFTVLATIVILC 521
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 30 KLCSVVFSHFVMISLVVAYC 49
+LC +VF+ F +++ +V C
Sbjct: 502 RLCLIVFTLFTVLATIVILC 521
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 88 TTQSIWTMTKSVPLFNHTNWTSSTVD 113
TT S T TKS + NH N T S +
Sbjct: 328 TTTSPMTSTKSTIVRNHLNSTCSVTN 353
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 4.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 1 MSRRELRSDRIEYPAPPPSKCAKFLYYTWKLCSVVFSHFVMISLVVAYCILGA 53
+S R +S P P P++ A+ S VF F+ L V Y I+ A
Sbjct: 373 LSGRSQKSTTGPPPGPTPAQKARMRALNIDRVSRVFFPFLFAVLNVTYWIMFA 425
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 157 TIAGYSAIVVYEFSIEYKPGLS 178
TI G +A+ Y F + + G+S
Sbjct: 378 TITGLNAVTTYRFQVFAENGVS 399
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 5.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 137 THHIQWTFTGALFYSIIVITTIAGYSAIVV 166
+H + TF L + ++V +A Y+ IVV
Sbjct: 77 SHCMTITFASFLLFILLVQIAVAVYAFIVV 106
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.135 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,645
Number of Sequences: 429
Number of extensions: 1927
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 188
length of database: 140,377
effective HSP length: 54
effective length of query: 134
effective length of database: 117,211
effective search space: 15706274
effective search space used: 15706274
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 41 (20.6 bits)
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