Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001312-TA|BGIBMGA001312-PA|undefined
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 36 0.047
09_06_0346 + 22435164-22435491,22435990-22436114,22436402-224365... 31 1.3
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 31 1.8
03_01_0069 + 549787-549791,550033-550303,550405-552201 30 3.1
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 29 4.0
01_05_0198 + 19170217-19171701 29 5.3
01_01_0260 - 2110026-2110447,2110510-2110651 29 7.1
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 9.3
03_01_0076 - 625609-625809,625919-626000,626303-626390,626496-62... 28 9.3
02_02_0680 - 12884555-12884767,12884824-12884912,12885259-12885376 28 9.3
01_01_0258 - 2101298-2101600 28 9.3
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 35.9 bits (79), Expect = 0.047
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 65 IKENIERAQRELSEARGYLTLATDEAGKKAGVA-LDAQLLLGKLNYACGSYDEALKHYK- 122
I E + ++ L + L + + AG+++ +A ++AQ+ G L+Y G+Y EA +K
Sbjct: 510 IYETMNEHEQALKLLQKALKMYNNSAGQQSTIAGIEAQM--GVLHYILGNYGEAYDSFKS 567
Query: 123 -LAELNTLTEKELPVRSLRIVAESYAIKGFCLEQNAVPSSTSRYKQAEREAEMVYKP 178
+A+L T EK+ + + A C+++ ++ + +++A E Y P
Sbjct: 568 AIAKLRTCGEKKTAFFGVALNQMGLA----CVQRYSINEAAELFEEARAVLEQEYGP 620
>09_06_0346 +
22435164-22435491,22435990-22436114,22436402-22436514,
22436919-22437023,22437147-22437531,22437645-22437776,
22437980-22438450,22438550-22439278,22439579-22439767
Length = 858
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 39 SPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSEARGYLTLATDEAGK 92
S E HF++ ++W ++ +ER+++E SE R EA K
Sbjct: 342 SSSSEEHQHFMVEANMQNEMFEQWQQVRNELERSRKEASEGRQKAEKELFEASK 395
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 30.7 bits (66), Expect = 1.8
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 15 EIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKE-NIERAQ 73
E+DK+ +K +L ++K+ S + + L+H LI E + +E +E E+
Sbjct: 276 EMDKNISNLAAEKEAKLGGEMKTLSEKVDKLSHALIKETSVMNNQEETIKSEEKGAEKIL 335
Query: 74 RELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYK--LAELNTLTE 131
+ + + + + + D A K A A + + + DE+ K Y+ LA + E
Sbjct: 336 KNIEDIKRSI-IERDTAVKNAEDG--AADMKKRADDLTKELDESEKEYQGVLAGKSNANE 392
Query: 132 KELPVRSLRIVAESYAIKGFCLEQNAVPSSTSRYKQAEREAEMVYKPPVAVAPAQGTLTR 191
K+ LR + L+Q S S + +++A++V K A A A+ L
Sbjct: 393 KKCLEDQLRDAKAAVGEAESGLKQLTTKISHSEKELKDKKAQLVSKRDEATA-AENELKA 451
Query: 192 RRED 195
R +D
Sbjct: 452 REKD 455
>03_01_0069 + 549787-549791,550033-550303,550405-552201
Length = 690
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 3 SKSKNAVRGFETEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEW 62
+++K + + E+ K+R+EA KA A + + + + E+LA E A
Sbjct: 444 AQAKANAQSAQEEVSKARQEAILAKAAVDAMEARLEAAKRETLAATTSAE-MAAASAAAL 502
Query: 63 PPIKENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGK 106
EN R +RE G +TL +E + + A + + + GK
Sbjct: 503 QQEDENARR-RRETGVGEGSVTLTMEEYDELSRRARETEEIAGK 545
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 15 EIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDE 61
EI + R + AV + + + QH S A L GEG L+ YLDE
Sbjct: 513 EIPEIRTGKDKIDAVVVDEDSVGSTNQHGSGAKILCGEGALDLYLDE 559
>01_05_0198 + 19170217-19171701
Length = 494
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 76 LSEARGYL--TLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
L EAR LA EA A+D LLL L G +D+AL+ YK A
Sbjct: 301 LREARATAERALADAEAEGDDLAAVDVNLLLAFLAARDGDFDDALRRYKAA 351
>01_01_0260 - 2110026-2110447,2110510-2110651
Length = 187
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 122 KLAELNTLTEKELPVRSLRIVAESYAIKGFC-LEQNAVPSSTSR 164
K A T T + +P RSLR ++YA + C L+ ++ +S R
Sbjct: 83 KNAVCGTRTPQPIPQRSLRFPLDAYAARDLCLLDARSISASLQR 126
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 95 GVALDAQL-LLGKLNYACGSYDEALKHYK-LAELNTLTEKELPVRSL 139
G +DA L +LGK+ A Y LKHY + E+ L +K L S+
Sbjct: 533 GDEVDALLSILGKIYIALDHYSPVLKHYPGVTEILNLVQKALKGESI 579
>03_01_0076 -
625609-625809,625919-626000,626303-626390,626496-626528,
627446-627569
Length = 175
Score = 28.3 bits (60), Expect = 9.3
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 27 KAVELAQQLKSRSPQHESLAHF--LIGEGKLEAYLDEWPPIKENIERAQRELSEARGYLT 84
KA+ L ++ ++ E A+ ++ E +L ++ W E E+A+ E A+
Sbjct: 35 KAIVLVKEAEATGGSAERDAYLAKIVSEKRL-VLINAW----EESEKARAENRAAKKLSY 89
Query: 85 LATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLAELNTLTEKELPVRSLR---- 140
+ + E KKA + + + + +L +Y+E LK+ KLA L+ E++ + + +
Sbjct: 90 ITSWENAKKAEMEAELKRIEQELEKKKAAYEEKLKN-KLALLHKTAEEKRALTTAKRGEE 148
Query: 141 -IVAESYAIK 149
I+AE A K
Sbjct: 149 LIMAEEMAAK 158
>02_02_0680 -
12884555-12884767,12884824-12884912,12885259-12885376
Length = 139
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 16 IDKSREEANWK----KAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKE 67
+ + E+A W+ A E + ++ P HE++A F+ GK++ +L P + +
Sbjct: 26 LSQQPEDAGWQIRPAPAQEKHRSSRAGEPPHENIAIFVDISGKMQCHLSSLPSLSK 81
>01_01_0258 - 2101298-2101600
Length = 100
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 80 RGYLTLATDEAGKKA 94
RGY T+ATDE G+KA
Sbjct: 21 RGYTTVATDETGRKA 35
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,349,429
Number of Sequences: 37544
Number of extensions: 253245
Number of successful extensions: 583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 12
length of query: 338
length of database: 14,793,348
effective HSP length: 82
effective length of query: 256
effective length of database: 11,714,740
effective search space: 2998973440
effective search space used: 2998973440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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