Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001312-TA|BGIBMGA001312-PA|undefined
(338 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24457| Best HMM Match : TPR_2 (HMM E-Value=1.4e-16) 51 2e-06
SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.015
SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0) 34 0.19
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 31 1.3
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 2.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.3
SB_28417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_9874| Best HMM Match : Sigma54_activat (HMM E-Value=0) 30 3.1
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 29 4.1
SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0) 29 4.1
SB_58067| Best HMM Match : TPR_2 (HMM E-Value=0) 29 4.1
SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_35388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_5728| Best HMM Match : Band_41 (HMM E-Value=1e-26) 29 5.4
SB_45932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_16818| Best HMM Match : Prefoldin (HMM E-Value=0.00051) 29 7.1
SB_49628| Best HMM Match : CBM_5_12 (HMM E-Value=8.9) 29 7.1
SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_6118| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91) 28 9.4
SB_24709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0) 28 9.4
SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_28629| Best HMM Match : FCH (HMM E-Value=5.2e-06) 28 9.4
SB_15843| Best HMM Match : VWA (HMM E-Value=4.1e-35) 28 9.4
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_24457| Best HMM Match : TPR_2 (HMM E-Value=1.4e-16)
Length = 1134
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 13 ETEIDKSREEANWKKAVELAQQLKSRSPQH---ESLAHFLIGEGKLEAYLDEWPPIKENI 69
E EI+++R E W+ +L +QL +R+ Q +SL L+ E LE Y + ++
Sbjct: 11 ENEIERARVEGRWESLSKLVEQLCTRTTQESQIDSLKILLLAEADLETYSRDHSLDVNDL 70
Query: 70 ERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLAELNTL 129
A+ L L E KK + +A LLL K + G + +++ A + L
Sbjct: 71 RAARSALEPVVTKLNNVIQER-KKDERSQEAMLLLCKAYFIQGEFQSSVQCCNEAGADDL 129
Query: 130 TEKELPVRSLRIVAESYAIKGFCLEQ 155
R R+VAE++A K LE+
Sbjct: 130 VIDMHFKRKSRLVAEAFAYKAMALEE 155
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 201 PWKPKKYAALNQFVPRNXXXXXXXXXXXXXAMAARDGVLSQSAEFAAARDHSL 253
P KP YA+ + F+PR+ +M RD VLS + AAAR ++
Sbjct: 307 PLKPLVYASDSLFIPRDEIEEALLLLLLEDSMVLRDAVLSVAPAKAAARSRTV 359
>SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 37.5 bits (83), Expect = 0.015
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 21 EEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
EEA ++K+A+ L Q K+ Q + AH LIG N Q + E
Sbjct: 463 EEAIGHYKEALRLYQ--KTSDDQGQGKAHLLIG----------------NTHNQQGKYEE 504
Query: 79 ARGYLTLATDEAGKKAGVAL--DAQLLLGKLNYACGSYDEALKHYKLA 124
ARGY A K + V +A L +GK +Y G Y+EA+ HYK A
Sbjct: 505 ARGYYKEALRLYQKTSDVQGQGEAHLRIGKTHYQQGKYEEAIGHYKEA 552
Score = 33.5 bits (73), Expect = 0.25
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 21 EEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
EEA ++K+A+ L Q K+ Q + AH LIG + + E A E
Sbjct: 663 EEARGHYKEALRLYQ--KTSDDQGQGEAHLLIGNTHYQ---------QGKYEEAIGNYKE 711
Query: 79 ARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
A +D+ G+ +A LL+GK +Y Y+EA+ HYK A
Sbjct: 712 ALRLYQKTSDDQGQG-----EAHLLIGKTHYQQCKYEEAIGHYKEA 752
Score = 31.9 bits (69), Expect = 0.76
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 100 AQLLLGKLNYACGSYDEALKHYKLA 124
A LL+GK +Y G Y+EA HYK A
Sbjct: 408 ANLLIGKTHYQQGKYEEARGHYKEA 432
Score = 31.1 bits (67), Expect = 1.3
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 21 EEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
EEA ++K+A+ L Q KS Q + AH LIG D+ + E A+ E
Sbjct: 583 EEARGHYKEALRLYQ--KSSDDQWQGKAHILIGNTH-----DQ----QGKYEEARGHYKE 631
Query: 79 ARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
A +D+ G+ A LL+G + G Y+EA HYK A
Sbjct: 632 ALRLYQKTSDDQGQGK-----AHLLIGNTHNQQGKYEEARGHYKEA 672
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 51 GEGKLEAYLDEWPPIKENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYA 110
G+GK + + + E A+ EA ++D+ G+ A L +G ++
Sbjct: 404 GQGKANLLIGKTHYQQGKYEEARGHYKEALRLYQKSSDDQGQGK-----AHLQIGNTHHQ 458
Query: 111 CGSYDEALKHYKLA 124
G Y+EA+ HYK A
Sbjct: 459 QGKYEEAIGHYKEA 472
>SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 845
Score = 33.9 bits (74), Expect = 0.19
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 26 KKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSEARGYLTL 85
K+A+ L Q K+ Q + AH LIG+ + + E A EA
Sbjct: 375 KEALRLYQ--KTSDDQGQGKAHLLIGDIHYQ---------QGKYEEAIGHYKEALRLYQK 423
Query: 86 ATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
+D+ G+ +A LL+G +Y G Y+EA+ HYK A
Sbjct: 424 TSDDQGQG-----EAHLLIGNTHYQQGKYEEAIGHYKEA 457
Score = 33.9 bits (74), Expect = 0.19
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 11 GFETEIDKSREEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKEN 68
G + EEA ++K+A+ L Q K+ Q + AH LIG+ + +
Sbjct: 558 GITHNLQGKYEEAIGHYKEALRLYQ--KTSDDQGQGKAHLLIGDIHYQ---------QGK 606
Query: 69 IERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
E A EA +D+ G+ +A LL+GK + G Y+EA+ HYK A
Sbjct: 607 YEEAIGHYKEALRLYQKTSDDQGQG-----EAHLLIGKTHNFQGKYEEAIGHYKEA 657
Score = 33.9 bits (74), Expect = 0.19
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 21 EEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
EEA ++K+A+ L Q K+ Q + AH LIGE + + E A+ E
Sbjct: 648 EEAIGHYKEALRLYQ--KTSDDQGQGKAHLLIGETHYQ---------QGKYEEARGHSKE 696
Query: 79 ARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
A +D+ G+ A LL+G +Y G Y+EA+ H K A
Sbjct: 697 ALRLYQKTSDDQGQGK-----AHLLIGNTHYQQGKYEEAIGHSKEA 737
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 51 GEGKLEAYLDEWPPIKENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYA 110
G+GK ++ ++ E A EA +D+ G+ +A LL+GK +Y
Sbjct: 269 GQGKAHLFIGNAHNLQGKYEEAIGHYKEALRLYQKTSDDQGQG-----EAHLLIGKTHYQ 323
Query: 111 CGSYDEALKHYKLA 124
G Y+EA H K A
Sbjct: 324 QGKYEEARGHSKEA 337
Score = 33.1 bits (72), Expect = 0.33
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 26 KKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSEARGYLTL 85
K+A+ L Q K+ Q + AH LIG+ + + E A EA
Sbjct: 335 KEALRLYQ--KTSDDQGQGKAHLLIGDIHYQ---------QGKYEEAIGHSKEALRLYQK 383
Query: 86 ATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
+D+ G+ A LL+G ++Y G Y+EA+ HYK A
Sbjct: 384 TSDDQGQGK-----AHLLIGDIHYQQGKYEEAIGHYKEA 417
Score = 33.1 bits (72), Expect = 0.33
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 21 EEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
EEA ++K+A+ L Q K+ Q + AH LIG + + E A E
Sbjct: 408 EEAIGHYKEALRLYQ--KTSDDQGQGEAHLLIGNTHYQ---------QGKYEEAIGHYKE 456
Query: 79 ARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
A +D+ G+ +A LL+G +Y G Y+EA+ H+K A
Sbjct: 457 ALRLYQKTSDDQGQG-----EAHLLIGDTHYQQGKYEEAIGHFKEA 497
Score = 31.9 bits (69), Expect = 0.76
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 26 KKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSEARGYLTL 85
K+A+ L Q K+ Q + AH LIG + + E A+ EA
Sbjct: 735 KEALRLYQ--KTSDDQGQGKAHLLIGNTHYQ---------QGKYEEARGHSKEALRLYQK 783
Query: 86 ATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
+D+ G+ +A LL+GK +Y G Y+EA H K A
Sbjct: 784 TSDDQGQG-----EAHLLIGKTHYQQGKYEEARGHSKEA 817
Score = 30.3 bits (65), Expect = 2.3
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 7 NAVRGFETEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIK 66
N + G++ + R + + ++ Q S A L+G G+ Y D
Sbjct: 152 NLLIGYKHYQQELRSQHSLPSNGQVRQTHNGESGDERDQAEELMGRGR--KYYD-----M 204
Query: 67 ENIERAQRELSEA-RGYLTLATDEAGKKAGVAL-DAQLLLGKLNYACGSYDEALKHYK 122
+N E A EA R Y + D+ KA + + +A L GK A G Y EAL+ Y+
Sbjct: 205 DNYEEAIEHYKEALRLYQKTSDDQRQGKAHLLIGNAHNLQGKYEEAIGHYKEALRLYQ 262
Score = 30.3 bits (65), Expect = 2.3
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 21 EEA--NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
EEA ++K+A+ L Q K+ Q + AH LIG + + E A+ E
Sbjct: 488 EEAIGHFKEALRLYQ--KTSDDQGQGEAHLLIGNTHYQ---------QGKYEEARGHSKE 536
Query: 79 ARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
A +D+ G +A LL+G + G Y+EA+ HYK A
Sbjct: 537 ALTLYQKTSDDQGHG-----EAHLLIGITHNLQGKYEEAIGHYKEA 577
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 17 DKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQREL 76
+K R E K+ E + + ++ E L + E + + L+ KE +ER QRE
Sbjct: 252 EKRRAEEEAKRKAEEEKAAREKAEMEEKLRRLKLQEKEEKRKLEAEKKEKERVEREQREE 311
Query: 77 SEARGYLTLATDEAGKKA 94
+ A ++A +KA
Sbjct: 312 RRKQEEKRRAEEQARRKA 329
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 123 LAELNTLTEKELPVRSLRIVAESYAIKGFCLEQNAVPS-STSRYKQAEREAE-MVYKPPV 180
L E + + EKELPV + ++V E K +++ V + K EREA+ + KP +
Sbjct: 5162 LEEKHLVEEKELPVSAEKVVEEKPLEKPITRKEDKVEEVKPKKEKPMEREAQHLEEKPLL 5221
Query: 181 AVAPAQGTLTRRREDHVSEGPWKPK 205
+ + E+ E P+ PK
Sbjct: 5222 KEKELPVSAEKAIEEKPLEKPFTPK 5246
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 15 EIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWP 63
E + RE KKA + A++L + +P E L+H + E + + E+P
Sbjct: 976 ERQEKRERKAKKKAEKAAEKLAAATPSEEPLSHHPVAEQRSAYHRPEFP 1024
>SB_28417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 14 TEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYL 59
T ++KS + W + LA+ L+ RSP H ++A +GK YL
Sbjct: 33 TPLEKSLVDLTWIRT--LARLLEKRSPYHRAIAPLSRYQGKTALYL 76
>SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 19 SREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
+RE+ WK V++ Q+ ++ ++ S L+ + KL E KE E + EL
Sbjct: 355 TREKEEWKGQVQVLQERLNKETEYRSEVERLLDQEKLNVTNTEMVKRKET-EELKSELEN 413
Query: 79 AR 80
AR
Sbjct: 414 AR 415
>SB_9874| Best HMM Match : Sigma54_activat (HMM E-Value=0)
Length = 314
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 111 CGSYDEALKHYKLAELNTLTEKELPVRSLR 140
CG++D +K + L ELN + ++ L ++S++
Sbjct: 119 CGAFDYVIKPFDLDELNLIVQRALQLQSMK 148
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 15 EIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEW-PPIKENIERAQ 73
E++KS + N K A + ++ LA L KLE EW ++ N+ER +
Sbjct: 787 ELEKSLNDKNLKLAASEEKVIE--------LAEELAKRLKLEQETAEWIEGVEGNMERTE 838
Query: 74 RELSEARGYLTLATDEAGKKAGVALD 99
R+LS A+ L E + G LD
Sbjct: 839 RDLSSAKSALLEKAKELEDEKGRILD 864
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 68 NIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
N E A + +A + ++T K+AGV L+ +G + + G+Y+EA+K+++ A
Sbjct: 467 NYEEAMKYYQQAL-QVYISTGNESKQAGVRLN----IGGVQQSLGNYEEAMKYFQQA 518
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 68 NIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
N E A + +A + ++T K+AGV L+ +G + G+Y+EA+K+++ A
Sbjct: 147 NYEEAMKYCQQAL-QVYISTGNESKQAGVRLN----IGGVQQRLGNYEEAMKYFQQA 198
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 68 NIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
N E A + +A +E+ K+AGV L+ +G + G+Y+EA+K+Y+ A
Sbjct: 307 NYEEAMKYYQQALQVFERTGNES-KQAGVRLN----IGGVQQRLGNYEEAMKYYQQA 358
>SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 495
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 65 IKENIERAQRELS---EARGYLTLAT---DEAGKKAGVALDAQLLLGKLNYACGSYDEAL 118
+++NI Q+ L EA Y A + G ++G A D + +G + G+Y+EA+
Sbjct: 143 VRQNIGVVQKSLGNYEEAMKYYQQALQVFERTGNESGQA-DVRHNIGVVQQCLGNYEEAM 201
Query: 119 KHYKLA-ELNTLTEKELPVRSLRI 141
K+Y+ A ++ T E S+R+
Sbjct: 202 KYYQQALQVYERTGNESKQASVRL 225
>SB_58067| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 593
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 99 DAQLLLGKLNYACGSYDEALKHY 121
D L +G +Y C +Y +A+KHY
Sbjct: 372 DVHLNIGNTHYECKNYKDAMKHY 394
>SB_31762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 99 DAQLLLGKLNYACGSYDEALKHY 121
D L +G +Y C +Y +A+KHY
Sbjct: 671 DVHLNIGNTHYECKNYKDAMKHY 693
>SB_35388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 14 TEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYL 59
T + KS + W + LA+ L+ RSP H ++A EGK YL
Sbjct: 21 TPLKKSLVDLTWIRT--LARLLEKRSPYHGAIAPLSRYEGKTTPYL 64
>SB_5728| Best HMM Match : Band_41 (HMM E-Value=1e-26)
Length = 906
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 24 NWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKEN 68
NW+ EL L+ S H++ F+ +LE Y DE+ P K+N
Sbjct: 730 NWQMIKELHTNLRGLSA-HDAEMEFIRLVQQLEGYGDEYYPAKDN 773
>SB_45932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 14 TEIDKSREEANWKKAVELAQQLKSRSPQHESLAHF 48
T + KS + W + LA+ L+ RSP H ++AHF
Sbjct: 45 TPLKKSLVDLTWIRT--LARLLEKRSPYHGAIAHF 77
>SB_16818| Best HMM Match : Prefoldin (HMM E-Value=0.00051)
Length = 162
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 113 SYDEALKHYKLAELNTLTEKE 133
S+DE L+ YK E+N LT+K+
Sbjct: 48 SFDEQLRKYKFMEINLLTKKK 68
>SB_49628| Best HMM Match : CBM_5_12 (HMM E-Value=8.9)
Length = 312
Score = 28.7 bits (61), Expect = 7.1
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 89 EAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLAELNTLTEKELP--------VRSLR 140
E KK G+ L A LG + + G Y+ ++ N ELP V L
Sbjct: 130 EMEKKLGIKLVAVDALGNVLWDSGKYERGYTEIRIPCHNNHAWAELPTEPPAIASVHGLD 189
Query: 141 IVAESYAIKGFCLEQNAVPSSTSRYKQAEREAEM 174
AES ++ FC + A P +TS +A REA++
Sbjct: 190 FEAES-ELRSFC-QGEAAPRATSAATKA-REAKV 220
>SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 163 SRYKQAEREAEMVYKPPVAVAPAQGTLTRRREDHVSEGPWKPKKYAALNQFVPRNXXXXX 222
+R +A +EA V + PVA P++ R R D + G + +A N
Sbjct: 791 NRINRANKEALRVVRSPVAPGPSEPQGLRARADDAAAGTARAGTPSAHTPVPESNSAWSA 850
Query: 223 XXXXXXXXAMAARDGVLSQSAEFAAA 248
+ + G+ ++ E AAA
Sbjct: 851 SSVIGVAGLLVSLIGLYTRRQELAAA 876
>SB_6118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 14 TEIDKSREEANWKKAVELAQQLKSRSPQHESLAHF 48
T + KS + W + LA+ L+ RSP H ++AHF
Sbjct: 30 TPLKKSLVDFTWIRT--LARLLEKRSPYHGAIAHF 62
>SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91)
Length = 571
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 14 TEIDKSREEANWKKAVELAQQLKSRSPQHESLAH 47
+E+D+ +E N+ KA ++A ++ SP E H
Sbjct: 80 SELDRLGKEGNYSKAQKIANKILQESPADEDAFH 113
>SB_24709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 163 SRYKQAEREAEMVYKPPVAVAPAQGTLTRRREDHVSEGPWKPKKYAALNQFVPRNXXXXX 222
+R +A +EA V + PVA P++ R R D + G + +A N
Sbjct: 209 NRINRANKEALRVVQSPVAPGPSEPQGLRARADDAAAGTARADTPSAHTPVPESNFAWSA 268
Query: 223 XXXXXXXXAMAARDGVLSQSAEFAAA 248
+ + G+ ++ E AAA
Sbjct: 269 SSVIGVAGLLVSLIGLYTRRQELAAA 294
>SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 357
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 68 NIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLA 124
N E A + +A +E+ K+AGV L+ +G + G+Y+EA+K+Y+ A
Sbjct: 187 NYEEAMKYYQQALQVFERTGNES-KQAGVRLN----IGGVQQRLGNYEEAMKYYQQA 238
>SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 67 ENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKH 120
++I + Q ++ A+ L+LA + K+ + A LG Y+ +D++LKH
Sbjct: 193 DSIGKPQEAINHAKTALSLAKEHKLKR--IEGQAHACLGDAYYSIAKFDDSLKH 244
>SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 48 FLIGEGKLEAYLDEWPPIKENIERAQRELSE 78
F + + L LDE+P IKE IE+ +E E
Sbjct: 473 FCLAKNDLMEVLDEYPNIKEKIEKIAKEKLE 503
>SB_28629| Best HMM Match : FCH (HMM E-Value=5.2e-06)
Length = 317
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 66 KENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNY--ACGSYDEALKHYKL 123
K + R ++ + ++ A +A A Q+L K Y AC + D+A K Y
Sbjct: 58 KRTVRRVDDGAKLCDDFMKMVSERAEIEALYAAKLQVLKSKKAYYAACRARDQAEKLYNS 117
Query: 124 AELNTLTEKEL 134
++ NT+ E ++
Sbjct: 118 SDPNTIKEDQI 128
>SB_15843| Best HMM Match : VWA (HMM E-Value=4.1e-35)
Length = 1686
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 6 KNAVRGFETEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPI 65
KN GF+ E++ + + + AV L + K + +S + I E PPI
Sbjct: 1482 KNCTVGFKPEVEHRKYVYDLRIAVLLKHRKKHKKFTDDSSEYPNIRRSSDI----EVPPI 1537
Query: 66 KENIERAQRELSEARGYLTLATD 88
N E A++ L R YL + ++
Sbjct: 1538 TRNFEDAEQRLRSVRNYLGIMSN 1560
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 3 SKSKNAVRGFETEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEW 62
SKSKN G TE+ K EE N + E+ ++++ +E + L KL L+E
Sbjct: 1923 SKSKNLENGKATEMVKKNEEKN-NEIEEMREKMRK---ANEEIEKILSKNSKLSDILNEL 1978
Query: 63 PPIKENI 69
ENI
Sbjct: 1979 NSGIENI 1985
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,158,477
Number of Sequences: 59808
Number of extensions: 274150
Number of successful extensions: 816
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 735
Number of HSP's gapped (non-prelim): 95
length of query: 338
length of database: 16,821,457
effective HSP length: 83
effective length of query: 255
effective length of database: 11,857,393
effective search space: 3023635215
effective search space used: 3023635215
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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