Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001312-TA|BGIBMGA001312-PA|undefined
(338 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 80 3e-15
Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 2.0
Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical p... 29 4.7
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 29 6.2
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 29 6.2
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 29 6.2
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 79.8 bits (188), Expect = 3e-15
Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 13 ETEIDKSREEANWKKAVELAQQLKSRSPQHESLAHFLIGEGKLEAYLDEWPPIKENIERA 72
E EID+ R +ANWK+ EL +KS++ E E LE YLD I
Sbjct: 10 EAEIDRVRADANWKRLSELLPSVKSKNSGLEDCYEMFQAEIVLETYLDHLGEIIRPSHDH 69
Query: 73 QRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYACGSYDEALKHYKLAELNTLTEK 132
+LS A L A V ++A +LL K YAC + +AL+ +E+
Sbjct: 70 MDKLSSAEQLLHEALKGHSDNYTVKIEANILLAKCLYACLEFRKALQCISNSEMENGKTP 129
Query: 133 ELPVRSLRIVAESYAIKGFCLE-QNAVPSS 161
+R+LR+VAE YAIKG C+E VP++
Sbjct: 130 FRTLRTLRLVAEGYAIKGLCIESMEEVPTT 159
>Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 9/157 (5%)
Query: 52 EGKLEAYLDEWPPIKENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYAC 111
+G++E Y+ +ER +++ +E + L EA K D L K
Sbjct: 561 DGRIEGYIRSEAAANNELERLRKDTAEQKEKLEAMEMEARSKDLELADLTRKLAKAREEH 620
Query: 112 GSYDEALKHYKLAELNTLTEKELPVRSLRIVAESY-------AIKGFCLEQNAVPSSTSR 164
+++ ++ A + E + + E Y + + F + + P++T
Sbjct: 621 ETFEINARNQFYAVTGQMHEDIESYKQRLLELEPYPGKIISGSFRDFPSQTDPSPATTDA 680
Query: 165 YKQAEREAEMVYKPPVA-VAPAQGTL-TRRREDHVSE 199
+ Q + E +++ P V+ V+ A +L RR H+ E
Sbjct: 681 WMQTDVEEQLMVSPEVSLVSEAPSSLQDSRRSSHLDE 717
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 9/157 (5%)
Query: 52 EGKLEAYLDEWPPIKENIERAQRELSEARGYLTLATDEAGKKAGVALDAQLLLGKLNYAC 111
+G++E Y+ +ER +++ +E + L EA K D L K
Sbjct: 561 DGRIEGYIRSEAAANNELERLRKDTAEQKEKLEAMEMEARSKDLELADLTRKLAKAREEH 620
Query: 112 GSYDEALKHYKLAELNTLTEKELPVRSLRIVAESY-------AIKGFCLEQNAVPSSTSR 164
+++ ++ A + E + + E Y + + F + + P++T
Sbjct: 621 ETFEINARNQFYAVTGQMHEDIESYKQRLLELEPYPGKIISGSFRDFPSQTDPSPATTDA 680
Query: 165 YKQAEREAEMVYKPPVA-VAPAQGTL-TRRREDHVSE 199
+ Q + E +++ P V+ V+ A +L RR H+ E
Sbjct: 681 WMQTDVEEQLMVSPEVSLVSEAPSSLQDSRRSSHLDE 717
>Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical
protein T09A5.2a protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 7 NAVRGFETEIDKSREEANWKKAVELAQQLKSRSPQHESLA 46
+ ++ + + REE +WKK A++LK+ + + LA
Sbjct: 153 DVIKPYPQMVQSMREEGHWKKLQRCAEELKTEKDELKRLA 192
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 110 ACGSYDEALKHYKLAELNTLTEKELPVRSLRIVAESYAIKGFCLEQNAVPSSTSRYKQAE 169
+ +YD+ +++ + T +P V SY + N PSS+S Y+Q+
Sbjct: 324 SASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYSSFPNQTPSSSSSYQQSS 383
Query: 170 REAEMV 175
+ MV
Sbjct: 384 QYTPMV 389
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 110 ACGSYDEALKHYKLAELNTLTEKELPVRSLRIVAESYAIKGFCLEQNAVPSSTSRYKQAE 169
+ +YD+ +++ + T +P V SY + N PSS+S Y+Q+
Sbjct: 324 SASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYSSFPNQTPSSSSSYQQSS 383
Query: 170 REAEMV 175
+ MV
Sbjct: 384 QYTPMV 389
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 110 ACGSYDEALKHYKLAELNTLTEKELPVRSLRIVAESYAIKGFCLEQNAVPSSTSRYKQAE 169
+ +YD+ +++ + T +P V SY + N PSS+S Y+Q+
Sbjct: 324 SASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYSSFPNQTPSSSSSYQQSS 383
Query: 170 REAEMV 175
+ MV
Sbjct: 384 QYTPMV 389
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.128 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,894,312
Number of Sequences: 27539
Number of extensions: 202061
Number of successful extensions: 483
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 478
Number of HSP's gapped (non-prelim): 9
length of query: 338
length of database: 12,573,161
effective HSP length: 82
effective length of query: 256
effective length of database: 10,314,963
effective search space: 2640630528
effective search space used: 2640630528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -