GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001311-TA|BGIBMGA001311-PA|undefined
         (85 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   2.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   2.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   2.9  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    19   8.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        19   8.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   8.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    19   8.7  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 26  TVLRRACPQSFVC 38
           T+L++ CPQ   C
Sbjct: 260 TILKKLCPQEEAC 272


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 26  TVLRRACPQSFVC 38
           T+L++ CPQ   C
Sbjct: 175 TILKKLCPQEEAC 187


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 26  TVLRRACPQSFVC 38
           T+L++ CPQ   C
Sbjct: 494 TILKKLCPQEEAC 506


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 12/35 (34%), Positives = 13/35 (37%)

Query: 23  YSTTVLRRACPQSFVCCSWLHVDTTGVGKLAHGSA 57
           Y TT    AC  +   C W      G   L HG A
Sbjct: 126 YYTTNESHACLSTGGSCYWPRGKNLGGTTLHHGMA 160


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
          protein.
          Length = 117

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 19 KVQHYSTTVLRRACPQ 34
          +++  +  VLR ACPQ
Sbjct: 67 RLKSLAPLVLRGACPQ 82


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 55 GSAPPYLSARRMTGRPARTLVALLQRLAAA 84
          GS+P +  +   T   ART  ++   ++AA
Sbjct: 66 GSSPQHSGSSASTSPAARTTSSMYPYVSAA 95


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)

Query: 30  RACPQSFVCCSWLHVDT 46
           +AC + F C   L V T
Sbjct: 207 KACGKGFTCSKQLKVHT 223


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
          protein.
          Length = 117

 Score = 19.0 bits (37), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 19 KVQHYSTTVLRRACPQ 34
          +++  +  VLR ACPQ
Sbjct: 67 RLKSLAPLVLRGACPQ 82


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.327    0.136    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,458
Number of Sequences: 429
Number of extensions: 809
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 85
length of database: 140,377
effective HSP length: 47
effective length of query: 38
effective length of database: 120,214
effective search space:  4568132
effective search space used:  4568132
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.3 bits)
S2: 37 (19.0 bits)