Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001310-TA|BGIBMGA001310-PA|IPR001478|PDZ/DHR/GLGF,
IPR008283|Peptidase M17, leucyl aminopeptidase, N-terminal,
IPR000819|Peptidase M17, leucyl aminopeptidase, C-terminal
(812 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 1e-24
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 6e-15
SB_5427| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-07
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-05
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 46 9e-05
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-04
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 44 4e-04
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 44 6e-04
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 0.001
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.014
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.018
SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.024
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.074
SB_52369| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.18) 36 0.13
SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18) 36 0.13
SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20) 36 0.17
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.17
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 36 0.17
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 35 0.23
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 35 0.30
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.40
SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16) 34 0.40
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.52
SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05) 33 0.69
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.1
SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.1
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 31 2.8
SB_11669| Best HMM Match : PDZ (HMM E-Value=6.4e-15) 31 4.9
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.9
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11) 30 8.5
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 30 8.5
>SB_58733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2060
Score = 112 bits (269), Expect = 1e-24
Identities = 62/140 (44%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 56 AETIPTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGS 115
A+ + WL + + KL V G+ PNHVLVNEY PGQGIMPH DG LF+P ++TIS+GS
Sbjct: 35 ADLLKQWLLKHATYLGKLPVFKGKAPNHVLVNEYEPGQGIMPHEDGPLFFPVVSTISLGS 94
Query: 116 HIVLKF---LKPTTDNEKVEMQP-------------MFSFLLEPRSLLILQDKLFSHYLH 159
H +L F LK T+++ M S LLEPRSLL+L + L++ YLH
Sbjct: 95 HTLLDFYHPLKKNTESQPTGMSHEETSKVTTLQDRYFMSLLLEPRSLLLLTEDLYTSYLH 154
Query: 160 SIEELNEDVIDDSIVNLNMC 179
IE D+ IVN C
Sbjct: 155 GIEGRAHDIFTTDIVNREQC 174
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 80.2 bits (189), Expect = 6e-15
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 726 DVTVTRSDGEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLS 785
D+T+ R EGFGFV++SS +K+ STIG++I SPA+RC L+VGD +VA+N + +
Sbjct: 893 DITLNRGAHEGFGFVILSSVHKSGSTIGRIIQGSPADRCRELYVGDKLVAVNGTSIVGMH 952
Query: 786 HPEVVALIKRSG 797
H ++V IK+SG
Sbjct: 953 HSDIVNTIKQSG 964
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 637 TGGPAEGLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVRHNR 688
T A+G +R GD + VDGV V H+ ++L+ AA G VTLGVR +
Sbjct: 767 TPAAADGRLRRGDEILYVDGVSVIDGYHRDVISLMKSAAQNGQVTLGVRRRQ 818
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 736 GFGFVVISSTNKATST-IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
GFGF +I I ++P+ A + G L GD ++ +N V N +H EVV++ +
Sbjct: 453 GFGFTIIGGDQSGELLQIKSIVPDGAAAKDGKLRTGDALIKVNGRSVVNKTHQEVVSMFQ 512
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 723 VPYDVTVTRSDGEGFGFVVISSTNKATST-IGQLIPNSPAERCGLLHVGDTIVAINHAPV 781
V Y +T+ R + GFGF ++ T IG ++ +PA G L GD I+ ++ V
Sbjct: 731 VDYYITLHRGES-GFGFRIVGGKEDNTQVAIGTIVDGTPAAADGRLRRGDEILYVDGVSV 789
Query: 782 RNLSHPEVVALIK 794
+ H +V++L+K
Sbjct: 790 IDGYHRDVISLMK 802
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRSG 797
IG L + + G L GD I+ IN+ PV + P+V+ LI + G
Sbjct: 50 IGDLKEDKVVYKKGKLLCGDVILEINNKPVAGYTRPDVLELISKDG 95
>SB_5427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 454 SGGLCLKKRESMVENRGSMXXXXXXXXXXXXXXXXQVPINVCAVIPICENMVSGQCMKVG 513
SGG+ LK M + M Q+P+NV + P+CENMV+G K G
Sbjct: 245 SGGISLKPSARMSLMKADMGGAAAVCSALVAIATLQLPMNVTVLTPLCENMVAGNANKPG 304
Query: 514 DVVRALNGLSIQFPPSCKIGRL 535
DV+ A NG +I+ + GRL
Sbjct: 305 DVITASNGKTIEVDNTDAEGRL 326
Score = 43.6 bits (98), Expect = 6e-04
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 242 KLGQAFVLTDVVPEYSAVALASLGPKDPGYNQLEALDETRE--NLRWAVGAGVRVLQN-- 297
KLG++ + +Y V LG KD ++ E ++E E N+R A AGV +N
Sbjct: 73 KLGKSKAFYGIDTDYPCVVAVGLGKKDHSVDE-ETIEEKEESANIRHAA-AGVYRTRNDP 130
Query: 298 --------RGCGDISVQXXXXXXXXXXXXXXXXWRFEEFRSVEERQPACRLSLHGQAGD- 348
R + S + F++ +S ++ + L + + D
Sbjct: 131 RTRNYPRTRNNTEESPISTPRNGAAAEGAHLALYSFDKLKSPKKHKLDVNLEMFKRIPDI 190
Query: 349 ---EGPGGAWHAGSVLGRAQNWARFLSDMPANKMTP 381
E P W G +L AQN+AR L DMPAN MTP
Sbjct: 191 HRFEEP---WSTGQILADAQNFARQLMDMPANLMTP 223
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 553 IEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQAL 594
+++TD EGRL+LADAL + + P +IDVAT T +AL
Sbjct: 317 VDNTDAEGRLILADALCHANTL-SPAAIIDVATLTGRPTRAL 357
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 48.0 bits (109), Expect = 3e-05
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 631 YYRRQITGGPAE--GLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVRHNR 688
Y + + GPA+ G +R GD + V+GV + G TH++AV ++ RA R + +
Sbjct: 1282 YVKSLMLNGPADRNGKIRIGDRILEVNGVSLVGVTHKQAVEIIKRAPQRCRLVID----- 1336
Query: 689 ADIQAMGVPAMVAPHTLLKYGGVQYDATPASWAGVPYDVTVTRSDGEGFGFVVISSTNK- 747
IQ + VP + + P G + V + + G G G ++ +
Sbjct: 1337 RSIQ-VNVPVPMK--------RISNKDDP---EGQTFTVDLVKGIG-GLGLSLVGGRDSD 1383
Query: 748 ----ATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKR 795
I ++ P PA G L VGD I +N + N SH + + +I++
Sbjct: 1384 PEHGGLLRIKKMFPGQPATLSGKLQVGDIIQEVNGKSLANASHQDAINIIRQ 1435
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 731 RSDGEGFGFVVISSTNKATSTIGQLI----PNSPAERCGLLHVGDTIVAINHAPVRNLSH 786
R GFGF ++++ + + G I P S AE G L VGD I+ +N V+ +SH
Sbjct: 1912 RKGPRGFGFSLVAAPSSVPNLQGIFIKTISPGSVAEEDGRLRVGDQILKVNGEDVQGMSH 1971
Query: 787 PEVVALIKR 795
V+ ++++
Sbjct: 1972 ARVIGMLRK 1980
Score = 37.5 bits (83), Expect = 0.043
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRS 796
+ L+ N PA+R G + +GD I+ +N + ++H + V +IKR+
Sbjct: 1283 VKSLMLNGPADRNGKIRIGDRILEVNGVSLVGVTHKQAVEIIKRA 1327
Score = 35.5 bits (78), Expect = 0.17
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 727 VTVTRSDGEGFGFVVISSTNKATSTIGQLIPN----SPAERCGLLHVGDTIVAINHAPVR 782
+ + + G+G GF ++ N +G + + S A + G L GD I+A+N +
Sbjct: 969 IKLRKEPGKGLGFTILGGENSQRLDLGIFVKSVTEGSVAFKDGRLKAGDRILAVNGTSLE 1028
Query: 783 NLSHPEVVALIK 794
+SH V +K
Sbjct: 1029 QVSHEYAVMQLK 1040
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 46.4 bits (105), Expect = 9e-05
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 81 PNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGSHIVLKFLKPTTDNEKVEMQPMFSF 139
P+ + VNEY PGQGI PH+D + F I ++S+G+ I + F P D+ V S
Sbjct: 231 PDQLTVNEYLPGQGIPPHVDTHSAFEDGICSLSLGAKISMDFRHP--DSRHV------SV 282
Query: 140 LLEPRSLLILQDKLFSHYLHSIEELNEDVIDDSI 173
LL RSLL++ + + H ++ +D SI
Sbjct: 283 LLPRRSLLVMSGESRYLWTHGKFDIIGSGLDTSI 316
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 709 GGVQYDATPASWAGVPYDVTVTRSDGEGFGFVVISSTN--KATSTIGQLIPNSPAERCGL 766
GG+ D G D ++ R+ G VV K + +IP SP+ G+
Sbjct: 127 GGLDADGKIPYIVGPTVDTSIKRAPNGSLGLVVAEEKGFQKPAMFVRNVIPGSPSAEGGV 186
Query: 767 LHVGDTIVAINHAPVRNLSHPEVVALIKRS 796
L GD +V IN +++H + + LIK S
Sbjct: 187 LERGDEVVGINGVNTEDMTHQQAMDLIKSS 216
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 631 YYRRQITGGPAE--GLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVRHNR 688
+ R I G P+ G++ GD + ++GV THQ+A+ L+ + G + L + N
Sbjct: 171 FVRNVIPGSPSAEGGVLERGDEVVGINGVNTEDMTHQQAMDLI--KSSPGKIDLKIVKNS 228
Query: 689 ADIQ 692
DI+
Sbjct: 229 LDIK 232
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 716 TPASWAGVPYDV-----TVTRSDGEG-FGFVVISSTNKATSTIGQLIPNSPAERCGLLHV 769
T A +PY V T+ D G F++ + + +P + G L
Sbjct: 498 TSVDGADIPYIVGPKKETIVLKDANGALKFLIAKEPGMPSPALFVRKVFAPPSQVGGLEP 557
Query: 770 GDTIVAINHAPVRNLSHPEVVALIKRS 796
GD IV IN ++ SH E + LI+ +
Sbjct: 558 GDEIVGINGKSIKGKSHEEAMNLIRHT 584
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 44.4 bits (100), Expect = 4e-04
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 700 VAPHTLLKYGGVQYDATPASWAGVPYDVTVTR-SDGEGFGFVVISSTNKATS-TIGQLIP 757
V H + YGG D+ V + V V D + FGF V+ ++ + I +
Sbjct: 19 VPDHLINGYGG---DSQHNMKQAVEFAVNVRMMGDEKRFGFSVMGGVDEGFAPNIDSIAQ 75
Query: 758 NSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKR 795
SPAER L +GD I+ +N V N SH EV+ I +
Sbjct: 76 GSPAERANL-RIGDEILEVNGTSVENFSHAEVILSIHK 112
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALI 793
IG+++ AE+ GLLH GD I+ IN ++ S EV L+
Sbjct: 470 IGRIVKGGAAEKSGLLHEGDEILEINGVHMKGKSVSEVCELL 511
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 43.6 bits (98), Expect = 6e-04
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 722 GVPYDVTVTRSDGEGFGFVVISSTNKATST-IGQLIPNSPAERCGLLHVGDTIVAINHAP 780
G P V V + EG G + I ++ PA RCG L+VGD I+A+N
Sbjct: 242 GEPRTVIVNKDKTEGLGISITGGKEHGVPILISEIHDGMPAARCGGLYVGDAILAVNGID 301
Query: 781 VRNLSHPEVVALI 793
+++ H + V ++
Sbjct: 302 LQDAKHNDAVKIL 314
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 726 DVTVTRSDGEGFGFVVISS---TNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVR 782
+V V + GE G +++ S + T+ I L + PA + G ++VGD I+++N+ +
Sbjct: 236 EVVVNKKPGEALGVMIVESGWGSMIPTAIIAHLAKDGPAAKSGRVNVGDQILSVNNTSLV 295
Query: 783 NLSHPEVVALIKRS 796
L PE +IK S
Sbjct: 296 GLPLPECQNVIKNS 309
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 39.1 bits (87), Expect = 0.014
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 734 GEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALI 793
G GFGF + T A + + SPA + L GD I+ IN VRN +H VV L+
Sbjct: 471 GAGFGFTL---TGNAPVCVRSVDKGSPAAQARL-KPGDHILEINGLNVRNKTHAHVVELL 526
Query: 794 KRSG 797
K SG
Sbjct: 527 KGSG 530
Score = 38.3 bits (85), Expect = 0.024
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 734 GEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALI 793
G GFGF + T A + + SPA + L GD I+ IN VRN +H VV L+
Sbjct: 303 GAGFGFTL---TGNAPVCVRLVDKGSPAAQARL-KPGDHILEINGLNVRNKTHAHVVELL 358
Query: 794 KRSG 797
K SG
Sbjct: 359 KGSG 362
Score = 34.7 bits (76), Expect = 0.30
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 735 EGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
E FGF + KA I + NS AER GL GD I+ +N V+ L+ ++V L +
Sbjct: 10 EAFGFKI---GGKAPVVIISVQDNSIAERAGL-QAGDQILELNGENVQALTKDQIVLLAR 65
Query: 795 RS 796
RS
Sbjct: 66 RS 67
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 38.7 bits (86), Expect = 0.018
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 749 TSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRS 796
T + Q+ PN PA++ G L GD IV++N V N ++ +V+ LI++S
Sbjct: 186 TVFVRQVAPNGPADKAG-LSSGDQIVSVNGNQVLNRTYSQVIELIQKS 232
>SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 38.3 bits (85), Expect = 0.024
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 727 VTVTRSDGEGFGFVVISST-NKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLS 785
+ V + + G G + N+ I ++ A++ L++GD I+A+N +R+ +
Sbjct: 293 IRVIKQEVGGLGISIKGGKENRMPILISKIFKGLAADQTESLYIGDAILAVNGEDLRHAT 352
Query: 786 HPEVVALIKRSG 797
H E V +KR+G
Sbjct: 353 HDEAVRALKRAG 364
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 733 DGEGFGFVVISSTNKATST--IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVV 790
+ +G G +VI + I + P +PAE+CG L GD ++ +N + ++H +
Sbjct: 2295 EDQGIGLMVIGGLDTPLGMLYIKDIQPGTPAEKCGHLRTGDQLLQVNDECLVGVTHAYAL 2354
Query: 791 ALIKRS 796
++K +
Sbjct: 2355 EVLKNT 2360
Score = 33.9 bits (74), Expect = 0.52
Identities = 12/45 (26%), Positives = 28/45 (62%)
Query: 751 TIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKR 795
T+ +++P S +R G L GD ++++N + N++H + ++K+
Sbjct: 220 TVRRILPGSVCDRNGKLQPGDRLISMNGESLTNVTHSTALHILKK 264
Score = 33.1 bits (72), Expect = 0.92
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 745 TNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
TN T+ ++P A + G + GD ++++N + L+H EV+ L++
Sbjct: 2527 TNCIDVTVRHVVPLGVAAKDGRIRKGDRVLSVNGRSTKGLTHQEVLNLLQ 2576
>SB_52369| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.18)
Length = 308
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 57 ETIPTWL-DLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDG-NLFYPTITTISVG 114
+ IP W+ +L + R+ K ++ N ++N+Y PG I+ H+D ++F I + S
Sbjct: 134 DDIPEWIYELVISRLEKAGIVPKDFINSAVINDYQPGGCIVSHIDPMHIFDRPIVSCSFF 193
Query: 115 SHIVLKF 121
S L F
Sbjct: 194 SSCTLSF 200
>SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18)
Length = 124
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 724 PYDVTVTRSDGEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRN 783
P++V + + +G G + + I +L+P A CG L V D I+ +N +
Sbjct: 8 PFEVHLIKGP-QGLGMSLTGGESGGPIYIKRLVPGGSAALCGQLQVNDVILQVNGKSLDR 66
Query: 784 LSHPEVVALIK 794
L++ E +++++
Sbjct: 67 LTYREALSILR 77
>SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)
Length = 285
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
I + PN PA++ G L GD ++A+N + L H + V ++K
Sbjct: 178 IVSITPNGPADKHGGLRPGDILLAVNDRSLVGLEHSQAVRILK 220
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSH 786
I ++ N PA R G+LHVGD I+ + H R+ H
Sbjct: 408 ISRISENGPAGRDGILHVGDKILKVRHHVTRDSHH 442
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRS 796
+ ++ NS R G L GD I+ ++ +RN SH E V +I+R+
Sbjct: 1322 VRHVLENSSVARLGELKAGDQILEVDGHDLRNASHEEAVEVIRRA 1366
Score = 35.1 bits (77), Expect = 0.23
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 760 PAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRSG 797
PAE+ G + D I+ +N PVR +SH + ++K +G
Sbjct: 1541 PAEQDGRIKQADEILEVNRTPVRGMSHYQASTVLKNTG 1578
Score = 33.5 bits (73), Expect = 0.69
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 757 PNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
P P + G++ GD ++ +N V +L H EVV LI+
Sbjct: 835 PEGPVGKNGIIQSGDHLIEVNGVGVLDLGHNEVVTLIQ 872
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 643 GLVRAGDLLTSVDGVPVTGATHQRAVALVCRA 674
G ++AGD + VDG + A+H+ AV ++ RA
Sbjct: 1335 GELKAGDQILEVDGHDLRNASHEEAVEVIRRA 1366
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 35.1 bits (77), Expect = 0.23
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 729 VTRSDGEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPE 788
V G GF ++ I ++ A+ G L GD I A+N + N +H +
Sbjct: 187 VLHKGNTGLGFNIVGGEENEGIFISFILAGGVADLSGELRRGDQIKAVNDVDLTNATHEQ 246
Query: 789 VVALIKRSG 797
A +K +G
Sbjct: 247 AAAALKGAG 255
Score = 33.1 bits (72), Expect = 0.92
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
I ++I A++ G L VGD I+++N + ++SH + V ++K
Sbjct: 47 ITKIIEGGAAQQDGRLQVGDKIISVNLQNLEDVSHEDAVQVLK 89
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 636 ITGGPAE--GLVRAGDLLTSVDGVPVTGATHQRAVA 669
+ GG A+ G +R GD + +V+ V +T ATH++A A
Sbjct: 214 LAGGVADLSGELRRGDQIKAVNDVDLTNATHEQAAA 249
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 34.7 bits (76), Expect = 0.30
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 613 TAAGARSGDRAWRLPLWDYYRRQITGGPA--EGLVRAGDLLTSVDGVPVTGATHQRAVAL 670
T G R R LP+ Y + + GG A +G +R G + SV+G +T TH+ A+
Sbjct: 529 TIVGGRGSPRG-DLPI--YIKNVLPGGAAAADGRLRRGYEVLSVNGTDMTSVTHREALDF 585
Query: 671 VCRAAHRGHVTLGVR 685
+ RG VT+ VR
Sbjct: 586 F-KNIRRGVVTIKVR 599
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 34.3 bits (75), Expect = 0.40
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 726 DVTVTRSDGEGFGFVVISSTNKATSTIG----QLIPNSPAERCGLLHVGDTIVAINHAPV 781
++T + G G G ++++ +G Q++ + PA + G L GD ++A+N +
Sbjct: 980 EITFNKGRG-GMGLSIVAAKGAGQDRLGIYIKQVVKDGPAAKDGRLQAGDQLIAVNGESL 1038
Query: 782 RNLSHPEVVALIKRSG 797
+S + + RSG
Sbjct: 1039 IGVSQEKAAECMVRSG 1054
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 631 YYRRQITGGPA--EGLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGV 684
Y ++ + GPA +G ++AGD L +V+G + G + ++A + R+ +VTL +
Sbjct: 1008 YIKQVVKDGPAAKDGRLQAGDQLIAVNGESLIGVSQEKAAECMVRSG--ANVTLRI 1061
>SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16)
Length = 270
Score = 34.3 bits (75), Expect = 0.40
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 712 QYDATPASWAGVPYDVTVTRSDGEGFGFVVISSTNKATST-IGQLIPNSPAERCGLLHVG 770
+Y+ P G P VT+ + G + + Q+ N+PA + G L G
Sbjct: 5 EYEIDPRGLQGKPGSVTLIKDKQNLIGISIGGGAPLCPCLYVVQVFDNTPASKDGTLQAG 64
Query: 771 DTIVAINHAPVRNLSHPEVVALIK 794
D IV +N +R + +V I+
Sbjct: 65 DEIVGVNGKSLRGKTKVDVARAIQ 88
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 33.9 bits (74), Expect = 0.52
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 642 EGLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVRH 686
+G ++ GD L SV+GV V G H++AV L+ A +G V L V++
Sbjct: 573 QGGLKRGDQLLSVNGVSVEGENHEKAVDLLKEA--QGSVRLVVKY 615
>SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05)
Length = 84
Score = 33.5 bits (73), Expect = 0.69
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALI 793
I ++ + AER G L VGD +++IN ++N H + V ++
Sbjct: 4 ISKIAKDGTAERDGRLKVGDKVLSINSRDMKNAKHDDAVNML 45
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 727 VTVTRSDGEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSH 786
V +T SDG+ G + +S I + P S A +L +GD IV +N V NLS
Sbjct: 797 VRLTLSDGKELGIHIDNS-----KFISFISPGSTAALNPMLAIGDKIVEVNGQSVENLSQ 851
Query: 787 PEVVALI 793
E L+
Sbjct: 852 LETEKLL 858
>SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 727 VTVTRSDGEGFGFVVISSTNKATSTIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSH 786
V + +S E G V + + +++ +R G L VGD I IN+ V +
Sbjct: 189 VRLIKSGKEPLGATVKCDEDTGDIVVARILRGGMVDRSGTLGVGDVIQEINNQSVIGKTT 248
Query: 787 PEVVALIKR 795
EVV +++R
Sbjct: 249 NEVVEIMER 257
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 31.5 bits (68), Expect = 2.8
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 752 IGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIK 794
+ ++PNS A +C + +GD ++ +N + +H + + + +
Sbjct: 149 VSDILPNSCASKCDCVRIGDELLEVNGHKLSGRTHADALTIFR 191
>SB_11669| Best HMM Match : PDZ (HMM E-Value=6.4e-15)
Length = 85
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 751 TIGQLIPNSPAERCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRSG 797
T+ QL P A GL V D I++IN +++H E IKR+G
Sbjct: 31 TVSQLTPGGKAITNGL-RVEDQILSINGMGCEDMTHMEAQESIKRTG 76
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 638 GGPAEGL-VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTL 682
G PAE VR GD + V+G V G H + V L+ AA +TL
Sbjct: 2691 GSPAERAGVRKGDFILQVNGNAVKGLPHFQIVRLIITAASPIKLTL 2736
>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
Length = 881
Score = 29.9 bits (64), Expect = 8.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 645 VRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVTLGVRHNRADIQAMGVPAMVAPH 703
++ GD + V+G V H++ V L+ R+ G V LGVR NR + A + H
Sbjct: 315 LKPGDQILYVNGSSVERHPHEQVVKLIARSPD-GRVNLGVR-NRVVAETKPATAALQSH 371
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 631 YYRRQITGGPA--EGLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVT 681
Y I G A + +R GD L +V G + G TH++A +L+ R R ++
Sbjct: 119 YVDNMIDGSDAYRDNRLRRGDQLVTVAGETLVGVTHEQAKSLLTRLKLRRDIS 171
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,084,505
Number of Sequences: 59808
Number of extensions: 1055652
Number of successful extensions: 2155
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2075
Number of HSP's gapped (non-prelim): 88
length of query: 812
length of database: 16,821,457
effective HSP length: 88
effective length of query: 724
effective length of database: 11,558,353
effective search space: 8368247572
effective search space used: 8368247572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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