Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001310-TA|BGIBMGA001310-PA|IPR001478|PDZ/DHR/GLGF,
IPR008283|Peptidase M17, leucyl aminopeptidase, N-terminal,
IPR000819|Peptidase M17, leucyl aminopeptidase, C-terminal
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0028 - 14262607-14262783,14262886-14262932,14263014-142632... 120 6e-27
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 88 2e-17
12_02_0137 + 14153603-14153629,14154136-14154586,14155066-141552... 68 3e-11
04_04_1056 - 30447791-30447850,30448020-30448085,30448299-304485... 41 0.003
03_02_1016 + 13228113-13228964 35 0.30
11_06_0608 - 25442883-25443206,25443420-25443623,25443831-254438... 32 1.6
08_02_0405 + 16790720-16791691,16792064-16792135,16794487-167946... 32 1.6
06_01_0275 + 2029542-2029689,2029777-2030295,2030657-2030754,203... 32 1.6
08_02_0307 - 15612761-15612856,15613879-15613950,15614325-15615290 32 2.1
07_01_0203 + 1469575-1470045 31 3.7
07_01_0199 - 1420982-1421452 31 3.7
07_01_0195 - 1387831-1388301 31 3.7
07_01_0191 - 1354678-1355148 31 3.7
07_01_0187 - 1321525-1321995 31 3.7
03_06_0236 - 32545561-32546961 31 3.7
03_05_0257 + 22439915-22440275,22440280-22440627,22440962-224410... 31 4.9
02_02_0320 + 8926960-8927376 30 6.4
03_02_0406 + 8182870-8184262,8184376-8184452,8184809-8184920,818... 30 8.5
>10_08_0028 -
14262607-14262783,14262886-14262932,14263014-14263281,
14263374-14263486,14264362-14264400,14264531-14264591,
14264685-14264834
Length = 284
Score = 120 bits (288), Expect = 6e-27
Identities = 51/105 (48%), Positives = 69/105 (65%)
Query: 17 AEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETIPTWLDLYLERIHKLNVM 76
AE+ +L +IY AP PKW L NRRLQNWGGV H KG++ + +P+WL +RI + +
Sbjct: 42 AEQSQLLHHIYQAPAPKWKSLKNRRLQNWGGVVHEKGLLPQALPSWLTKITDRICQWTGL 101
Query: 77 CGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVLKF 121
NHVL+NEY P QGIMPH DG ++P + IS+ S +V+ F
Sbjct: 102 FPSAINHVLINEYHPNQGIMPHQDGPAYFPVVAIISLASPVVIDF 146
Score = 39.1 bits (87), Expect = 0.014
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 138 SFLLEPRSLLILQDKLFSHYLHSIEELNEDVIDDSIVNLNMCSD-KYVREASGEINQKLD 196
S LL P SLLI +D+ ++ YLH I++ NE D + N+ C + K++ G+ N D
Sbjct: 193 SLLLMPCSLLIFKDQAYTDYLHGIQD-NELQNLDKVANMLQCPEFKHLNSGDGQGN--TD 249
Query: 197 SSKKGLVLGVY-QCGKKLELT 216
S GVY + +++ LT
Sbjct: 250 ESCSLEQSGVYRRTARRVSLT 270
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 88.2 bits (209), Expect = 2e-17
Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 35/284 (12%)
Query: 371 LSDMPANKMTPIDLGQAALDTLCPLG--VTVEAREREWIEAQNMQAFLTVARGSCEEPIF 428
L + PAN +TP L + A + T + E + M ++L VA S P F
Sbjct: 287 LVNSPANVLTPAVLAEEASNIASTYSDVFTATILDVEKCKELKMGSYLGVAAASANPPHF 346
Query: 429 LECNYRGDK-ESRPPVVIAAKGVTFDSGGLCLKKRE--SMVENRGSMXXXXXXXXXXXXX 485
+ Y+ ++ + I KG+TFDSGG +K S+ + M
Sbjct: 347 IHLCYKPPGGNAKRKLAIVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVFGAAKAL 406
Query: 486 XXXQVP-INVCAVIPICENMVSGQCMKVGDVVRALNGLSIQFPPSCKIGRLTNHSYSIKK 544
+ P + V ++ CENM+SG M+ GD+V A NG +I+ + GRLT +
Sbjct: 407 GQIKPPGVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGRLTLADALV-- 464
Query: 545 RYCRYGCSIEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQALGGAACGCYTE 604
Y C+ Q V K +ID+AT T + ALG + G +T
Sbjct: 465 ----YACN-------------------QGVDK---IIDLATLTGACVVALGPSIAGIFTP 498
Query: 605 SEALWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAEGLVRAG 648
S+ L ++V AA SG++ WR+PL + Y + G A+ +V G
Sbjct: 499 SDELAKEVAAASEISGEKFWRMPLEESYWESMKSGVAD-MVNTG 541
>12_02_0137 +
14153603-14153629,14154136-14154586,14155066-14155260,
14155366-14155628,14155964-14156104,14156188-14156283,
14156672-14156749,14157134-14157194,14157324-14157511,
14158441-14158569
Length = 542
Score = 67.7 bits (158), Expect = 3e-11
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Query: 553 IEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQALGGAACGCYTESEALWRDV 612
+++TD EGRL LADALVY + + +ID+AT T ALG + G T S+ L ++V
Sbjct: 392 VDNTDAEGRLTLADALVYACKLGVDK-IIDLATLTGYCRIALGPSIAGILTPSDELDKEV 450
Query: 613 TAAGARSGDRAWRLPLWDYYRRQI---------TGGPAEGLVRAG 648
AA SG++ WRLPL + Y Q+ TG P G + AG
Sbjct: 451 AAAYEASGEKFWRLPLEESYWEQMKSSVADMLNTGSPLGGAITAG 495
>04_04_1056 -
30447791-30447850,30448020-30448085,30448299-30448583,
30448744-30448869,30449068-30449154,30449273-30449695
Length = 348
Score = 41.1 bits (92), Expect = 0.003
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 17 AEEQLILSNIYAAPKPKWTQLSNRRLQNWGGV-------PHNKGMIAETIPTWLDLYLER 69
AEEQ +L+ + P W L+ RR+Q++G +K + E +P ++ +++
Sbjct: 138 AEEQELLAAVDNRP---WKSLAKRRVQHYGFEFLYETRNVDSKQFLGE-LPPFVSKIIDK 193
Query: 70 IHKL---NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGSHIVLKFLK-- 123
I N + + + VNEY G G+ PH+D + F I ++S+ +++F K
Sbjct: 194 IMSFPGANKCTSKLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSLSLAGPCIMEFRKYP 253
Query: 124 ------PT----TDNEKVEMQPMF--SFLLEPRSLLILQDK---LFSHYL--HSIEELNE 166
P+ TD + +E + L PRS+L++ + + HY+ H I+++
Sbjct: 254 KGSWRAPSMVSGTDKDSIEEPQCIRKAVFLPPRSMLLMSGEGRYAWHHYIPHHKIDDVGG 313
Query: 167 DVI 169
VI
Sbjct: 314 QVI 316
>03_02_1016 + 13228113-13228964
Length = 283
Score = 34.7 bits (76), Expect = 0.30
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 627 PLWD-YYRRQITGGPAEGLVRAGDLLTSVDGVPVTGATHQRAVALVCRA-------AHRG 678
PL+ ++R Q+TGG ++R L G P AT + LV + A
Sbjct: 51 PLFSCHHRPQVTGGDGGEMLRDHHALAGA-GRPRVAATPPLQLRLVGNSRLPLPAPAAPW 109
Query: 679 HVTLGVRHNRADIQAMGVPAMVAPHTLLKYGGVQYDATPASWAGVPYDVTVTRSDGEGF 737
HV G N ++ PAM PH LL+ G V A P VT RS G GF
Sbjct: 110 HVMTGGPRNTMVLRPAPPPAMNHPHPLLRGGAVTGAAPP---------VTTRRSSGTGF 159
>11_06_0608 -
25442883-25443206,25443420-25443623,25443831-25443859,
25444335-25444557
Length = 259
Score = 32.3 bits (70), Expect = 1.6
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 79 RRP--NHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVLKFLK-----PTTDN-EK 130
R+P + ++ N Y PG+GI H+D F I +S+ S V+ F + P + E
Sbjct: 136 RKPLFDQMIANRYEPGEGICAHVDLMRFDDGIAIVSLESPCVMHFSRAEQEVPICETLES 195
Query: 131 VEMQP-MFSFLLEPRSLLILQDKLFSHYLHSI 161
V +P L P SL+++ + H I
Sbjct: 196 VHAEPTKIPVYLNPGSLVLMSGDARYLWKHEI 227
>08_02_0405 +
16790720-16791691,16792064-16792135,16794487-16794621,
16794630-16794758
Length = 435
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 608 LWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAEGLVRAGDLLTSVDGVPV 659
L+R V A A SGD+ WR+ W Y + T P +G + D T+ G V
Sbjct: 198 LFRTVRVAFAASGDKQWRVSSWSMY-QAYTPLPFQGKLYILDQATAYGGPEV 248
>06_01_0275 +
2029542-2029689,2029777-2030295,2030657-2030754,
2031718-2032028,2032560-2032631,2032729-2033398
Length = 605
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 56 AETIPTWLDLYLERIHKLNVMCGRR-PNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVG 114
++ +P+ + ++R+ + +V+ P+ +VN Y PG I PH+D + F T+S
Sbjct: 270 SDPMPSLFKIMIKRLVRWHVLPKTCIPDSCIVNIYDPGDCIPPHIDSHDFVRPFCTVSFL 329
Query: 115 SHIVLKF 121
S + F
Sbjct: 330 SECNILF 336
>08_02_0307 - 15612761-15612856,15613879-15613950,15614325-15615290
Length = 377
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 608 LWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAEGLVRAGDLLTSVDGVPV 659
L R V A A SGDR WR+ W Y + T P +G + D T+ G V
Sbjct: 196 LSRTVRVAFAASGDRQWRVSSWSMY-QAYTPLPFQGKLYMLDQATAYGGPEV 246
>07_01_0203 + 1469575-1470045
Length = 156
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 594 LGGAACGCYTESEALWRDVTAAG 616
+GGA CG YT+ +WRD TA G
Sbjct: 106 VGGAMCGHYTQ--VVWRDTTAVG 126
>07_01_0199 - 1420982-1421452
Length = 156
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 594 LGGAACGCYTESEALWRDVTAAG 616
+GGA CG YT+ +WRD TA G
Sbjct: 106 VGGAMCGHYTQ--VVWRDTTAVG 126
>07_01_0195 - 1387831-1388301
Length = 156
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 594 LGGAACGCYTESEALWRDVTAAG 616
+GGA CG YT+ +WRD TA G
Sbjct: 106 VGGAMCGHYTQ--VVWRDTTAVG 126
>07_01_0191 - 1354678-1355148
Length = 156
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 594 LGGAACGCYTESEALWRDVTAAG 616
+GGA CG YT+ +WRD TA G
Sbjct: 106 VGGAMCGHYTQ--VVWRDTTAVG 126
>07_01_0187 - 1321525-1321995
Length = 156
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 594 LGGAACGCYTESEALWRDVTAAG 616
+GGA CG YT+ +WRD TA G
Sbjct: 106 VGGAMCGHYTQ--VVWRDTTAVG 126
>03_06_0236 - 32545561-32546961
Length = 466
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 112 SVGSHIVLKFLKPTTDNEKVEMQPMFS-FLLEPRSLLILQDKLFSHYL 158
+VG H V F P + + ++ P F FLLEPR+L LQ L H L
Sbjct: 85 AVGKHNVTIFA-PRNEALERDLDPEFKRFLLEPRNLKSLQSLLLFHVL 131
>03_05_0257 +
22439915-22440275,22440280-22440627,22440962-22441015,
22441390-22441763
Length = 378
Score = 30.7 bits (66), Expect = 4.9
Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 605 SEALWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAEGLVRAGDLLTSVDGVPVTGATH 664
S A+ R GAR R WR P RR GG A G + A S P
Sbjct: 74 SRAVTRRGRTRGARGRRRTWRRPC---SRRGAGGGVATGSLAAAPTAVS----PGHAVVD 126
Query: 665 QRAVALVCRAAHRGHVTLG 683
Q V RGHV +G
Sbjct: 127 QHEAVAVVGDVDRGHVAVG 145
>02_02_0320 + 8926960-8927376
Length = 138
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 699 MVAPHTLLKYGGVQYDATPASWAGVPYDVTVTRSDGEGFGFVVISSTNKATSTIGQLI 756
MV + YGG A PASWAGV + S EG ++ KA S Q +
Sbjct: 65 MVDEYYYYSYGGA---AGPASWAGVLSSIPEEESSDEGTPAADAATLRKARSDSDQFV 119
>03_02_0406 +
8182870-8184262,8184376-8184452,8184809-8184920,
8185064-8185071,8185633-8186217
Length = 724
Score = 29.9 bits (64), Expect = 8.5
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 125 TTDNEKVEMQPMFSFLLEPR-SLLILQDKLFSHYLHSIEELNEDVIDDSIVNLNMCSDKY 183
+ D+++ M P FL EP SL+++ L + HS +++ + +N K+
Sbjct: 414 SNDDKQKTMTPQLKFLQEPSPSLVLIPTNLLT---HSSSNCADNIPLSCDLTINAGEVKH 470
Query: 184 VREASG-EINQKLDSSKK 200
V E+S N+K DSS+K
Sbjct: 471 VSESSCLAANRKEDSSQK 488
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,918,885
Number of Sequences: 37544
Number of extensions: 1036550
Number of successful extensions: 2316
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2297
Number of HSP's gapped (non-prelim): 22
length of query: 812
length of database: 14,793,348
effective HSP length: 88
effective length of query: 724
effective length of database: 11,489,476
effective search space: 8318380624
effective search space used: 8318380624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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