Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001310-TA|BGIBMGA001310-PA|IPR001478|PDZ/DHR/GLGF,
IPR008283|Peptidase M17, leucyl aminopeptidase, N-terminal,
IPR000819|Peptidase M17, leucyl aminopeptidase, C-terminal
(812 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30910.1 68417.m04389 cytosol aminopeptidase family protein c... 96 7e-20
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 96 7e-20
At4g30920.1 68417.m04390 cytosol aminopeptidase family protein c... 96 9e-20
At1g31600.3 68414.m03879 oxidoreductase, 2OG-Fe(II) oxygenase fa... 48 2e-05
At1g31600.2 68414.m03877 oxidoreductase, 2OG-Fe(II) oxygenase fa... 48 2e-05
At1g31600.1 68414.m03878 oxidoreductase, 2OG-Fe(II) oxygenase fa... 48 2e-05
At4g20350.1 68417.m02970 expressed protein hypothetical protein ... 43 0.001
At4g02485.1 68417.m00337 oxidoreductase, 2OG-Fe(II) oxygenase fa... 39 0.012
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 37 0.047
At3g52370.1 68416.m05756 beta-Ig-H3 domain-containing protein / ... 35 0.19
At2g35860.1 68415.m04403 beta-Ig-H3 domain-containing protein / ... 35 0.25
At1g64540.1 68414.m07316 F-box family protein contains F-box dom... 31 3.1
At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal hydrolase-r... 30 7.1
At2g20150.1 68415.m02356 expressed protein and genefinder 30 7.1
At4g36390.1 68417.m05170 radical SAM domain-containing protein /... 29 9.3
>At4g30910.1 68417.m04389 cytosol aminopeptidase family protein
contains Pfam profiles: PF00883 cytosol aminopeptidase
family catalytic domain, PF02789: cytosol aminopeptidase
family N-terminal domain
Length = 581
Score = 96.3 bits (229), Expect = 7e-20
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 371 LSDMPANKMTPIDLGQAA--LDTLCPLGVTVEAREREWIEAQNMQAFLTVARGSCEEPIF 428
L + PAN ++P L + A L ++ +T + E + M ++L VA S P F
Sbjct: 270 LVNSPANVLSPAVLAEEASNLASMYSNVMTANILKEEQCKELKMGSYLAVAAASANPPHF 329
Query: 429 LECNYRGDKES-RPPVVIAAKGVTFDSGGLCLKKRESMVENRGSMXXXXXXXXXXXXXXX 487
+ Y+ + + + KG+TFDSGG +K ++ +
Sbjct: 330 IHLIYKPSSGPVKTKLALVGKGLTFDSGGYNIKIGPELIIELMKIDVGGSAAVLGAAKAI 389
Query: 488 XQVP---INVCAVIPICENMVSGQCMKVGDVVRALNGLSIQFPPSCKIGRLTNHSYSIKK 544
++ + V ++ CENM+SG M+ GDV+ A NG +I+ + GRLT +
Sbjct: 390 GEIKPPGVEVHFIVAACENMISGTGMRPGDVITASNGKTIEVNDTDSEGRLTLADALV-- 447
Query: 545 RYCRYGCSIEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQALGGAACGCYTE 604
Y C+ Q V K ++D+AT T ++ ALG + G YT
Sbjct: 448 ----YACN-------------------QGVDK---IVDIATLTGEIIVALGPSMAGMYTA 481
Query: 605 SEALWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAE 642
S+ L ++V AA RSG++ WR+P+ + Y + G A+
Sbjct: 482 SDELAKEVIAASQRSGEKLWRMPMEESYWEMMKSGVAD 519
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 96.3 bits (229), Expect = 7e-20
Identities = 83/288 (28%), Positives = 126/288 (43%), Gaps = 35/288 (12%)
Query: 367 WARFLSDMPANKMTPIDLGQAALDTLCPLG--VTVEAREREWIEAQNMQAFLTVARGSCE 424
+ R L + PAN +TP L + A T E + M ++L VA S
Sbjct: 204 FGRELINSPANVLTPAVLAEEAAKVASTYSDVFTANILNEEQCKELKMGSYLAVAAASAN 263
Query: 425 EPIFLECNYRGDKES-RPPVVIAAKGVTFDSGGLCLKKRE--SMVENRGSMXXXXXXXXX 481
P F+ Y+ S + + + KG+TFDSGG +K S+ + M
Sbjct: 264 PPHFIHLVYKPPNGSVKTKLALVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVLGA 323
Query: 482 XXXXXXXQVP-INVCAVIPICENMVSGQCMKVGDVVRALNGLSIQFPPSCKIGRLTNHSY 540
+ P + V ++ CENM+SG M+ GDV+ A NG +I+ + GRLT
Sbjct: 324 AKAIGEIKPPGVEVHFIVAACENMISGTGMRPGDVITASNGKTIEVNNTDAEGRLTLADA 383
Query: 541 SIKKRYCRYGCSIEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQALGGAACG 600
+ Y C+ Q V K ++D+AT T + ALG + G
Sbjct: 384 LV------YACN-------------------QGVDK---IVDLATLTGACVIALGTSMAG 415
Query: 601 CYTESEALWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAEGLVRAG 648
YT S+ L ++V AA RSG++ WR+PL + Y + G A+ +V G
Sbjct: 416 IYTPSDELAKEVIAASERSGEKLWRMPLEESYWEMMKSGVAD-MVNTG 462
>At4g30920.1 68417.m04390 cytosol aminopeptidase family protein
contains Pfam profiles: PF00883 cytosol aminopeptidase
family catalytic domain, PF02789: cytosol aminopeptidase
family N-terminal domain
Length = 583
Score = 95.9 bits (228), Expect = 9e-20
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 371 LSDMPANKMTPIDLGQAALDTLCPLG--VTVEAREREWIEAQNMQAFLTVARGSCEEPIF 428
L + PAN +TP L + AL+ +T E + M ++L VA S P F
Sbjct: 271 LVNSPANVLTPAVLAEEALNLASMYSDVMTANILNEEQCKELKMGSYLAVAAASANPPHF 330
Query: 429 LECNYRGDKES-RPPVVIAAKGVTFDSGGLCLKKRES-MVE-NRGSMXXXXXXXXXXXXX 485
+ Y+ + + + KG+TFDSGG +K ++E + M
Sbjct: 331 IHLIYKPSSGPVKTKLALVGKGLTFDSGGYNIKTGPGCLIELMKFDMGGSAAVLGAAKAI 390
Query: 486 XXXQVP-INVCAVIPICENMVSGQCMKVGDVVRALNGLSIQFPPSCKIGRLTNHSYSIKK 544
+ P + V ++ CENM+SG M+ GDV+ A NG +I+ + GRLT +
Sbjct: 391 GQIKPPGVEVHFIVAACENMISGTGMRPGDVLTASNGKTIEVNNTDAEGRLTLADALV-- 448
Query: 545 RYCRYGCSIEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQALGGAACGCYTE 604
Y C+ Q V K V+D+AT T + ALG + G YT
Sbjct: 449 ----YACN-------------------QGVDK---VVDLATLTGACIIALGTSMAGIYTP 482
Query: 605 SEALWRDVTAAGARSGDRAWRLPLWDYYRRQITGGPAEGLVRAG 648
S+ L ++V AA RSG++ WR+P+ + Y + G A+ +V G
Sbjct: 483 SDKLAKEVIAASERSGEKLWRMPMEESYWEMMKSGVAD-MVNTG 525
>At1g31600.3 68414.m03879 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 431
Score = 48.0 bits (109), Expect = 2e-05
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 31/180 (17%)
Query: 17 AEEQLILSNIYAAPKPKWTQLSNRRLQNWG-----GVPH--NKGMIAETIPTWLDLYLER 69
AEEQ +L+ + A W L+ RR+Q++G G + K + E +P+++ LER
Sbjct: 223 AEEQQLLAAVDAR---HWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILER 278
Query: 70 IHKL----NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGSHIVLKFLK- 123
I+ N + + VNEY G G+ PH+D + F I ++S+ +++F +
Sbjct: 279 IYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRY 338
Query: 124 -------PTTDNEKVEMQPMF--SFLLEPRSLLILQDK---LFSHYL--HSIEELNEDVI 169
TTD EK + L PRS+L+L + ++HY+ H I+++ + VI
Sbjct: 339 SVSTWKASTTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVI 398
>At1g31600.2 68414.m03877 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 344
Score = 48.0 bits (109), Expect = 2e-05
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 31/180 (17%)
Query: 17 AEEQLILSNIYAAPKPKWTQLSNRRLQNWG-----GVPH--NKGMIAETIPTWLDLYLER 69
AEEQ +L+ + A W L+ RR+Q++G G + K + E +P+++ LER
Sbjct: 136 AEEQQLLAAVDAR---HWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILER 191
Query: 70 IHKL----NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGSHIVLKFLK- 123
I+ N + + VNEY G G+ PH+D + F I ++S+ +++F +
Sbjct: 192 IYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRY 251
Query: 124 -------PTTDNEKVEMQPMF--SFLLEPRSLLILQDK---LFSHYL--HSIEELNEDVI 169
TTD EK + L PRS+L+L + ++HY+ H I+++ + VI
Sbjct: 252 SVSTWKASTTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVI 311
>At1g31600.1 68414.m03878 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profiles PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family, PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 431
Score = 48.0 bits (109), Expect = 2e-05
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 31/180 (17%)
Query: 17 AEEQLILSNIYAAPKPKWTQLSNRRLQNWG-----GVPH--NKGMIAETIPTWLDLYLER 69
AEEQ +L+ + A W L+ RR+Q++G G + K + E +P+++ LER
Sbjct: 223 AEEQQLLAAVDAR---HWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGE-LPSFVSPILER 278
Query: 70 IHKL----NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGSHIVLKFLK- 123
I+ N + + VNEY G G+ PH+D + F I ++S+ +++F +
Sbjct: 279 IYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAGPCIMEFRRY 338
Query: 124 -------PTTDNEKVEMQPMF--SFLLEPRSLLILQDK---LFSHYL--HSIEELNEDVI 169
TTD EK + L PRS+L+L + ++HY+ H I+++ + VI
Sbjct: 339 SVSTWKASTTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYIPHHKIDKVKDKVI 398
>At4g20350.1 68417.m02970 expressed protein hypothetical protein -
Caenorhabditis elegans,SPTREMBL:Q17527
Length = 139
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 96 MPHLDGNLFYPTITTISVGSHIVLKF-----LKPTTDNEKVEMQP----------MFSFL 140
MPH DG ++P + +S+GS +V+ F L+ + P FS L
Sbjct: 1 MPHQDGPAYFPVVAILSLGSPVVMDFTPHLRLRSGDGYISKDQSPCAESCAPERDSFSVL 60
Query: 141 LEPRSLLILQDKLFSHYLHSIEE 163
L P+SLLI +D +S +LH I +
Sbjct: 61 LMPQSLLIFKDDAYSDFLHGISD 83
>At4g02485.1 68417.m00337 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam domain PF03171, 2OG-Fe(II)
oxygenase superfamily
Length = 226
Score = 39.1 bits (87), Expect = 0.012
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 82 NHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVLKFLKPTTDNEKVEMQPMFSFLL 141
+ ++VN Y PG+GI H+D F I +S+ S V++F P NE LL
Sbjct: 121 DQLIVNLYQPGEGICAHVDLLRFEDGIAIVSLESPCVMRF-SPAEKNE----YEAVDVLL 175
Query: 142 EPRSLLILQDKLFSHYLHSI 161
P SL+++ + + H I
Sbjct: 176 NPGSLILMSGEARYRWKHEI 195
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 37.1 bits (82), Expect = 0.047
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 133 MQPMFSFLLEPRSLLILQDKLFSHYLHSIEELNEDVIDDSIVNLNMC--SDKYVREASGE 190
+Q +S+ L L+L+ F +H +EE N+ ++ +++ N C + E + E
Sbjct: 994 LQQDYSYTLNDNKTLLLKFSEFKDGMHVVEEENDAILQEAVALSNTCVVYRSFGSEMAEE 1053
Query: 191 INQKLD--SSKKGLVLGVYQCGKKLELTPVGQELDQKSGGKILQHLNE 236
+ ++ SS + + G+ + + LE G+E + + K+L++L E
Sbjct: 1054 VEDFVETVSSLREISTGLKRKVETLEKKLEGKEKESQGLNKMLENLQE 1101
>At3g52370.1 68416.m05756 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein weak similarity to
osteoblast specific factor 2 [Homo sapiens] GI:393319;
contains Pfam profile PF02469: Fasciclin domain;
supporting cDNA gi|26450295|dbj|AK117608.1|
Length = 436
Score = 35.1 bits (77), Expect = 0.19
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 112 SVGSHIVLKFLKPTTDNEKVEMQPMF-SFLLEPRSLLILQDKLFSHYLHSIEELNEDVID 170
+VG H + F P D + + P F SFLL+P++L LQ L H L + +
Sbjct: 63 AVGQHNITIFA-PRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILP--KRITSPQFS 119
Query: 171 DSIVNLNMCSDKYVREASGEIN 192
++V+ S+ ++ +G++N
Sbjct: 120 SAVVSHRTLSNDHLHFTNGKVN 141
>At2g35860.1 68415.m04403 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein contains Pfam
profile PF02469: Fasciclin domain
Length = 445
Score = 34.7 bits (76), Expect = 0.25
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 112 SVGSHIVLKFLKPTTDNEKVEMQPMF-SFLLEPRSLLILQDKLFSHYL 158
+VG H + F P D + + P+F SFLLEPR+L LQ L H L
Sbjct: 67 AVGKHNITIFA-PRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHIL 113
>At1g64540.1 68414.m07316 F-box family protein contains F-box domain
Pfam:PF00646
Length = 444
Score = 31.1 bits (67), Expect = 3.1
Identities = 11/23 (47%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 93 QGIMPHLDGNLFYPTITTISVGS 115
QG++PH DG +F+P + T+S+G+
Sbjct: 132 QGLVPH-DGTVFFPALKTLSLGA 153
>At5g51530.1 68418.m06390 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1149
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 118 VLKFLKPTTDNEKVEMQPMFSFLLEPRSLLILQDKLF 154
V FL T EK++ P FSFLL + LL +D F
Sbjct: 429 VNSFLDHTRVKEKIDFDPQFSFLLLDKRLLKCKDVPF 465
>At2g20150.1 68415.m02356 expressed protein and genefinder
Length = 93
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 128 NEKVEMQPMFSFLLE--PRSLLILQDKLFSHYLHSIEEL 164
+E + M+ + SF LE P S+ L+DKLFS YL +E L
Sbjct: 24 SESITMERIVSFTLEEVPESIAKLEDKLFS-YLLDLEGL 61
>At4g36390.1 68417.m05170 radical SAM domain-containing protein /
TRAM domain-containing protein similar to CDK5
activator-binding protein [Rattus norvegicus]
GI:7330738; contains Pfam profiles PF00919: UPF0004
family protein, PF01938: TRAM domain, PF04055: radical
SAM domain protein
Length = 640
Score = 29.5 bits (63), Expect = 9.3
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 373 DMPANKMTPIDLGQAALDTLCPLGVTVEAREREWIEAQNMQAFLTVARGSCEEPIFLECN 432
D+P + +D GQ ++TL L T I ++ AF++V RG F
Sbjct: 248 DLP-RLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAFCIVP 306
Query: 433 Y-RGDKESRP-PVVIAAKGVTFDSG 455
+ RG + SRP +I G ++SG
Sbjct: 307 FTRGRERSRPVESIIREVGELWESG 331
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,507,585
Number of Sequences: 28952
Number of extensions: 776097
Number of successful extensions: 1688
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1668
Number of HSP's gapped (non-prelim): 21
length of query: 812
length of database: 12,070,560
effective HSP length: 87
effective length of query: 725
effective length of database: 9,551,736
effective search space: 6925008600
effective search space used: 6925008600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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