Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001309-TA|BGIBMGA001309-PA|IPR003780|Cytochrome oxidase
assembly
(318 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W1F5 Cluster: CG3803-PA; n=5; Endopterygota|Rep: CG38... 343 4e-93
UniRef50_UPI00015B48FD Cluster: PREDICTED: similar to ENSANGP000... 316 6e-85
UniRef50_Q7KZN9 Cluster: Cytochrome c oxidase assembly protein C... 311 2e-83
UniRef50_UPI000058454A Cluster: PREDICTED: similar to cytochrome... 295 1e-78
UniRef50_Q22251 Cluster: Putative uncharacterized protein; n=2; ... 272 1e-71
UniRef50_Q9FKT8 Cluster: Similarity to cytochrome oxidase assemb... 246 8e-64
UniRef50_O76740 Cluster: Cytochrome c oxidase assembly protein; ... 241 1e-62
UniRef50_Q6C0H5 Cluster: Yarrowia lipolytica chromosome F of str... 204 3e-51
UniRef50_A2QVS0 Cluster: Contig An11c0080, complete genome; n=2;... 195 1e-48
UniRef50_Q5D9X3 Cluster: SJCHGC06866 protein; n=1; Schistosoma j... 192 1e-47
UniRef50_Q5K7Z7 Cluster: Cytochrome c oxidase biogenesis-related... 191 2e-47
UniRef50_A1CT55 Cluster: Cytochrome C oxidase assembly protein c... 186 9e-46
UniRef50_P40086 Cluster: Cytochrome c oxidase assembly protein C... 175 9e-43
UniRef50_A5DKK4 Cluster: Putative uncharacterized protein; n=1; ... 175 2e-42
UniRef50_A4AD07 Cluster: Cytochrome oxidase assembly protein; n=... 173 5e-42
UniRef50_UPI00006CA44C Cluster: Cytochrome oxidase assembly prot... 171 3e-41
UniRef50_A5Y0M4 Cluster: Putative cytochrome c oxidase assembly ... 167 4e-40
UniRef50_Q4Q7Z4 Cluster: Cytochrome oxidase assembly protein-lik... 161 3e-38
UniRef50_Q82X64 Cluster: Cytochrome oxidase assembly; n=4; Prote... 160 5e-38
UniRef50_Q10361 Cluster: Electron transfer protein 1, mitochondr... 157 4e-37
UniRef50_Q8G1D1 Cluster: Cytochrome c oxidase assembly protein, ... 149 9e-35
UniRef50_A0CRQ7 Cluster: Chromosome undetermined scaffold_25, wh... 149 1e-34
UniRef50_Q2W552 Cluster: Uncharacterized protein required for cy... 147 3e-34
UniRef50_Q4UKQ2 Cluster: Cytochrome c oxidase assembly protein; ... 145 2e-33
UniRef50_Q6N660 Cluster: Possible cytochrome c oxidase assembly ... 143 6e-33
UniRef50_Q5UF25 Cluster: Cytochrome c oxidase assembly protein, ... 140 3e-32
UniRef50_Q89KD9 Cluster: Cytochrome oxidase assembly factor; n=3... 140 4e-32
UniRef50_A5CF77 Cluster: Cytochrome c oxidase assembly protein; ... 140 6e-32
UniRef50_Q7RLI6 Cluster: Cytochrome c oxidase assembly protein; ... 140 6e-32
UniRef50_Q5FG54 Cluster: Cytochrome C oxidase assembly protein; ... 139 1e-31
UniRef50_A7AML1 Cluster: Cytochrome c oxidase assembly protein, ... 135 1e-30
UniRef50_Q4ECP5 Cluster: Cytochrome c oxidase assembly protein; ... 134 4e-30
UniRef50_Q5PBP7 Cluster: Cytochrome C oxidase assembly protein; ... 132 2e-29
UniRef50_Q5BVH5 Cluster: SJCHGC06865 protein; n=1; Schistosoma j... 130 3e-29
UniRef50_A7DDH6 Cluster: Cytochrome oxidase assembly; n=2; Methy... 130 5e-29
UniRef50_A5FA69 Cluster: Cytochrome oxidase assembly precursor; ... 130 5e-29
UniRef50_A5NUF6 Cluster: Cytochrome oxidase assembly; n=2; Alpha... 130 6e-29
UniRef50_Q1GWK6 Cluster: Cytochrome oxidase assembly precursor; ... 128 2e-28
UniRef50_A3UCD7 Cluster: Cytochrome oxidase assembly; n=2; Hypho... 127 3e-28
UniRef50_Q9A8H9 Cluster: Cytochrome c oxidase assembly protein, ... 126 8e-28
UniRef50_Q0BQ20 Cluster: Heme O monooxygenase; n=1; Granulibacte... 126 1e-27
UniRef50_A5FXV4 Cluster: Cytochrome oxidase assembly; n=1; Acidi... 125 2e-27
UniRef50_Q2GCS4 Cluster: Putative cytochrome oxidase assembly pr... 122 9e-27
UniRef50_A3VUY2 Cluster: Cytochrome oxidase assembly factor; n=1... 119 9e-26
UniRef50_Q4MZC9 Cluster: Cytochrome c oxidase assembly protein, ... 118 3e-25
UniRef50_Q1NBL9 Cluster: Cytochrome oxidase assembly; n=4; Sphin... 113 4e-24
UniRef50_Q4FLV1 Cluster: Cytochrome c oxidase assembly protein; ... 105 2e-21
UniRef50_A6EFM9 Cluster: Cytochrome c oxidase assembly protein; ... 105 2e-21
UniRef50_Q0BZT0 Cluster: Cytochrome c oxidase assembly protein; ... 103 5e-21
UniRef50_Q66LN8 Cluster: Heme A synthase; n=26; Alphaproteobacte... 99 7e-20
UniRef50_A5FXV3 Cluster: Cytochrome oxidase assembly; n=1; Acidi... 96 9e-19
UniRef50_Q4P0H1 Cluster: Putative uncharacterized protein; n=1; ... 95 3e-18
UniRef50_A3K259 Cluster: Cytochrome oxidase assembly; n=1; Sagit... 79 1e-13
UniRef50_Q5DHU8 Cluster: SJCHGC09297 protein; n=1; Schistosoma j... 71 5e-11
UniRef50_UPI0000E2263C Cluster: PREDICTED: similar to Cox15 prot... 56 9e-07
UniRef50_P00692 Cluster: Alpha-amylase precursor; n=52; Bacteria... 36 1.8
UniRef50_A3JBB5 Cluster: Cytochrome oxidase assembly protein; n=... 35 2.4
UniRef50_Q7QTD5 Cluster: GLP_9_6596_9676; n=1; Giardia lamblia A... 35 3.2
UniRef50_A5GCT2 Cluster: Cytochrome oxidase assembly precursor; ... 34 5.6
UniRef50_Q8DT08 Cluster: Intracellular alpha-amylase; n=14; Stre... 33 7.3
>UniRef50_Q9W1F5 Cluster: CG3803-PA; n=5; Endopterygota|Rep:
CG3803-PA - Drosophila melanogaster (Fruit fly)
Length = 393
Score = 343 bits (843), Expect = 4e-93
Identities = 163/318 (51%), Positives = 197/318 (61%), Gaps = 2/318 (0%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
MVTW+L GE+MP +EEW +EF YQQYPE+K KN N+T +FK+I+ ME+ HR WGRAI
Sbjct: 78 MVTWKLTGERMPRTQEEWVQEFNLYQQYPEYKLKNVNMTVEEFKFIFMMEYMHRMWGRAI 137
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRV 120
G LPA YFW +G K V + L+ QGLMGWYMVKSGLEDRF P+DVPRV
Sbjct: 138 GGFFLLPAVYFWRKGYFCAKTKKSVLLLGTLIGLQGLMGWYMVKSGLEDRFQDPNDVPRV 197
Query: 121 SQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITA 180
SQYRLA+HL+ P + + K+ +I GL H KAM +TA
Sbjct: 198 SQYRLASHLAAAFVLYSLSLSKAMSLL--IPTNTFVIQAKKAFNIKGLTHLTKAMVLLTA 255
Query: 181 VSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXX 240
+SGAFVAGLDAGLVYNSFPKMGD W+PDD+ F+P KN TENPTTVQF+HR+LG
Sbjct: 256 ISGAFVAGLDAGLVYNSFPKMGDKWIPDDMWTFAPIQKNITENPTTVQFNHRILGISTVT 315
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLL 300
GV TLL YVP LA +HQ+GSL+LL
Sbjct: 316 LTTALWLVTRRMQLPKRANWAINAVVAMAWTQATLGVTTLLNYVPVPLATAHQSGSLILL 375
Query: 301 SLAVWLTHEVKLLKYIPK 318
S A+WL+HEV+LLKY+PK
Sbjct: 376 SFALWLSHEVRLLKYLPK 393
>UniRef50_UPI00015B48FD Cluster: PREDICTED: similar to
ENSANGP00000013266; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000013266 - Nasonia
vitripennis
Length = 399
Score = 316 bits (775), Expect = 6e-85
Identities = 154/325 (47%), Positives = 191/325 (58%), Gaps = 7/325 (2%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
MV+W L GEK+PT E W EF+ Y+Q+PE++ N+N+T +FK IW+ME+AHR WGR I
Sbjct: 75 MVSWTLFGEKVPTTEISWIDEFKNYKQFPEYQISNKNMTLEEFKRIWWMEYAHRMWGRLI 134
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRV 120
G +PA YFW+ ML P K R+ + L+ QGLMGWYMVKSGLE+RF GP+DVPRV
Sbjct: 135 GVVFIVPAVYFWFNNMLNPVTKKRILILGTLIGCQGLMGWYMVKSGLENRFDGPTDVPRV 194
Query: 121 SQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITG-------LAHAVK 173
SQYRLAAHL P + ELK LA + K
Sbjct: 195 SQYRLAAHLGLAIFIYSGLLYTTLDQLIPVRSNTNNYNTSELKPTIKYNNRFRILAFSSK 254
Query: 174 AMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRV 233
+ F+TA+SGAFVAGLDAGL+YN+FPKM + W+PDDIL SP KN TENPTTVQF+HR
Sbjct: 255 GLIFLTALSGAFVAGLDAGLIYNTFPKMCNKWIPDDILFMSPLYKNLTENPTTVQFNHRT 314
Query: 234 LGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQ 293
LG G+ TLL +VPT LAA HQ
Sbjct: 315 LGMSTLLAVSAISWMSRKCNLPRRASTAVIVLTCAAYTQAILGIFTLLNHVPTYLAALHQ 374
Query: 294 AGSLVLLSLAVWLTHEVKLLKYIPK 318
+GSL+LLS A+WL HE+K +K + K
Sbjct: 375 SGSLLLLSSAIWLCHEIKYIKKLAK 399
>UniRef50_Q7KZN9 Cluster: Cytochrome c oxidase assembly protein
COX15 homolog; n=23; Eumetazoa|Rep: Cytochrome c oxidase
assembly protein COX15 homolog - Homo sapiens (Human)
Length = 410
Score = 311 bits (763), Expect = 2e-83
Identities = 151/319 (47%), Positives = 194/319 (60%), Gaps = 8/319 (2%)
Query: 1 MVTWRLLGE-KMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
MV W L+ E K PT++EEW+ EF++YQQ+PEFK N ++T ++FK+IWYME++HR WGR
Sbjct: 99 MVDWHLIKEMKPPTSQEEWEAEFQRYQQFPEFKILNHDMTLTEFKFIWYMEYSHRMWGRL 158
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
+G LPAAYFW +G L MK RV CGLV QGL+GWYMVKSGLE++ D+PR
Sbjct: 159 VGLVYILPAAYFWRKGWLSRGMKGRVLALCGLVCFQGLLGWYMVKSGLEEK-SDSHDIPR 217
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VSQYRLAAHL P L + +L + AH + F+T
Sbjct: 218 VSQYRLAAHLGSALVLYCASLWTSLSLLLP---PHKLPETHQLLQLRRFAHGTAGLVFLT 274
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
A+SGAFVAGLDAGLVYNSFPKMG++W+P+D+ FSP ++N ENPT VQFDHR+LG
Sbjct: 275 ALSGAFVAGLDAGLVYNSFPKMGESWIPEDLFTFSPILRNVFENPTMVQFDHRILGITSV 334
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G++TLL YVPT LAA+HQ+GSL L
Sbjct: 335 TAITVLYFLSRRIPLPRRTKMAAVTLLALAYTQVGLGISTLLMYVPTPLAATHQSGSLAL 394
Query: 300 LSLAVWLTHEVKLLKYIPK 318
L+ A+WL +E L+ +PK
Sbjct: 395 LTGALWLMNE---LRRVPK 410
>UniRef50_UPI000058454A Cluster: PREDICTED: similar to cytochrome
oxidase assembly factor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome oxidase
assembly factor - Strongylocentrotus purpuratus
Length = 435
Score = 295 bits (724), Expect = 1e-78
Identities = 149/320 (46%), Positives = 189/320 (59%), Gaps = 11/320 (3%)
Query: 1 MVTWRLL-GEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
M W L+ G + PT +E+W+ EFE+Y+Q+PE+KY + IT FK+IW ME++HR WGRA
Sbjct: 125 MTDWHLIKGMRPPTTQEQWEAEFERYKQFPEYKYVHTGITLQQFKFIWTMEYSHRMWGRA 184
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
IG A +PAA FW +G + +K R+ +Y L+ QGL+GW+MVKSGLE+ D+PR
Sbjct: 185 IGLAFVIPAAIFWKKGWISKSLKPRLGIYGSLLVFQGLLGWFMVKSGLEE--PAKHDIPR 242
Query: 120 VSQYRLAAHL-SXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFI 178
VSQYRLAAHL S +P T+ K L + AH A+ F
Sbjct: 243 VSQYRLAAHLGSAFVLYSLMLWGGLSQILKPL----TIANSKNLSLLRKCAHGSMAIIFT 298
Query: 179 TAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXX 238
TA+SGAFVAGLDAGLVYNSFPKM D W+P+DI+A P KN ENPTTVQFDHR+LG
Sbjct: 299 TAMSGAFVAGLDAGLVYNSFPKMADKWIPEDIMAHDPKYKNVFENPTTVQFDHRILGTTT 358
Query: 239 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLV 298
G+ TLL +VPT+LAA+HQ+GSL
Sbjct: 359 GATVAGLWLLARRVPLPSRARLAVNCMVGMVGVQITLGICTLLYFVPTSLAAAHQSGSLT 418
Query: 299 LLSLAVWLTHEVKLLKYIPK 318
LLSLA+W HE L+ IPK
Sbjct: 419 LLSLALWFAHE---LRRIPK 435
>UniRef50_Q22251 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 395
Score = 272 bits (666), Expect = 1e-71
Identities = 141/317 (44%), Positives = 182/317 (57%), Gaps = 8/317 (2%)
Query: 1 MVTWRLLGE-KMPTNEEEWQKEFEKYQQYPEFKYKN--QNITFSDFKWIWYMEFAHRTWG 57
MV W L K P +++W++EFEKY+ YPE+KYK+ + +T ++FK+IW ME+ HR WG
Sbjct: 81 MVNWDLFRTMKPPFGQKQWEEEFEKYKAYPEYKYKSSSEEMTLNEFKFIWSMEYGHRMWG 140
Query: 58 RAIGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDV 117
RAIG +P AYFW RG PDMK R+A+ L+ AQG +GW+MVKSGL D SDV
Sbjct: 141 RAIGIVFLIPCAYFWARGRFAPDMKRRMALATTLLLAQGGIGWWMVKSGL-DPSKNSSDV 199
Query: 118 PRVSQYRLAAHLSXXXXXXXXXX-XXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMT 176
PRVSQYRLA HL+ +P + K+ L+ G+ H K M
Sbjct: 200 PRVSQYRLATHLTMAFVLYSIFFWNGLSHLVKPHDLSKVRSKLGALR---GMTHGSKLMV 256
Query: 177 FITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGX 236
F TA+ GAFVAGLDAGLVYNS+PK +NW+P+++L+ SPT KNF EN TVQF HR L
Sbjct: 257 FSTAIMGAFVAGLDAGLVYNSWPKFAENWIPENMLSRSPTWKNFFENDVTVQFVHRNLAY 316
Query: 237 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGS 296
GV TL+ YVP LAA HQ+GS
Sbjct: 317 LTVISVLSTFLIGRRAPIPKRTRMALNLTVAAVFGQAALGVFTLINYVPVWLAACHQSGS 376
Query: 297 LVLLSLAVWLTHEVKLL 313
+ LLS +WL+HE++ L
Sbjct: 377 MALLSSVLWLSHELRRL 393
>UniRef50_Q9FKT8 Cluster: Similarity to cytochrome oxidase assembly
factor; n=8; Viridiplantae|Rep: Similarity to cytochrome
oxidase assembly factor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 457
Score = 246 bits (601), Expect = 8e-64
Identities = 128/325 (39%), Positives = 177/325 (54%), Gaps = 10/325 (3%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
M W+ GE P ++E W KEFEKY+Q PE+K N+ + DFK+I++ME+AHR WGR +
Sbjct: 129 MTDWKFTGEFPPLSDEAWAKEFEKYKQSPEYKRVNKGMNLEDFKFIYWMEYAHRMWGRGL 188
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDV--P 118
G LP +YF +G + + ++++ L A QG +GW+MVKSGLE+ PS+ P
Sbjct: 189 GIMFALPFSYFLRKGYITLRLGVQLSGLFALGAGQGFIGWWMVKSGLEE---PPSEYSQP 245
Query: 119 RVSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFI 178
RVS YRLAAHL+ P P A +L ++ + LA V + I
Sbjct: 246 RVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVRGAAKVKKLALPVSLIVGI 305
Query: 179 TAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXX 238
TA+SGAFVAG DAG +N+FPKMGD W+PD+I P ++NF EN TVQ DHR+L
Sbjct: 306 TAISGAFVAGNDAGRAFNTFPKMGDTWIPDNIFEMKPLLRNFFENTATVQLDHRLLATTT 365
Query: 239 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLV 298
GV+TLL YVP +L ++HQAG+L
Sbjct: 366 LIAIGTMWWFTRKLDIHPAVKALIGSTVGMTAVQVTLGVSTLLSYVPVSLGSAHQAGALT 425
Query: 299 LLSLAVWLTHEVK-----LLKYIPK 318
LL+L + L H ++ LLK +P+
Sbjct: 426 LLTLMLLLNHTLRRPSPSLLKSLPQ 450
>UniRef50_O76740 Cluster: Cytochrome c oxidase assembly protein;
n=2; Dictyostelium discoideum|Rep: Cytochrome c oxidase
assembly protein - Dictyostelium discoideum (Slime mold)
Length = 482
Score = 241 bits (591), Expect = 1e-62
Identities = 131/334 (39%), Positives = 181/334 (54%), Gaps = 21/334 (6%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W+ ++G P +EEW+ EFEKY+Q+PE+K N +T S+FK I++ E++HR GR
Sbjct: 147 IVDWKPVVGAIPPITQEEWEAEFEKYKQFPEYKRLNMGMTLSEFKEIFFWEYSHRLLGRV 206
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRF--HGPSDV 117
IG A F P ++ +G + + +++V + AQG +GWYMVKSGL+++ SD+
Sbjct: 207 IGVAFFFPFVWYLKKGYINRSLAKKLSVVFLMGGAQGALGWYMVKSGLDEKLIQDRGSDI 266
Query: 118 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFP-AAATLQKIKE-------------LK 163
PRVSQYRLAAHL RP + A +QK+K ++
Sbjct: 267 PRVSQYRLAAHLGSAFVIYMALLWFGLGLVRPSALSPAMMQKLKSAMSTLAQQKSSFTIE 326
Query: 164 SITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDIL--AFSPTIKNFT 221
+ +H V + F+TA+SGAFVAGLDAGLVYN+FPKMG W+PDDI+ P KN
Sbjct: 327 KMKKYSHQVSGLIFLTAMSGAFVAGLDAGLVYNTFPKMGHQWIPDDIINPKIKPAYKNMF 386
Query: 222 ENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXGVAT 279
E+ TVQF HRVL G+ T
Sbjct: 387 EHDVTVQFQHRVLATITYGSILALSAFAYRGRLALSPKARLATNCLLAVGTAQVALGITT 446
Query: 280 LLCYVPTALAASHQAGSLVLLSLAVWLTHEVKLL 313
LL +VP +L A+HQ GSL LLS+A+WL HE+K L
Sbjct: 447 LLTFVPVSLGAAHQTGSLTLLSVAIWLLHELKKL 480
>UniRef50_Q6C0H5 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=3; Ascomycota|Rep:
Yarrowia lipolytica chromosome F of strain CLIB122 of
Yarrowia lipolytica - Yarrowia lipolytica (Candida
lipolytica)
Length = 515
Score = 204 bits (497), Expect = 3e-51
Identities = 124/332 (37%), Positives = 165/332 (49%), Gaps = 24/332 (7%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P +E +W +EF+KY+ PEFK N NIT S+FK+I++ME+AHR WGR IG
Sbjct: 142 WKPVTGSLPPMSEADWIEEFDKYKDSPEFKLLNSNITLSEFKFIFWMEWAHRLWGRFIGL 201
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRF-HGPSDVPRVS 121
LPA YF R + P++ R+ V L+ QG +GW+MVKSGL+++F + PRVS
Sbjct: 202 TFVLPAVYFVARKRVSPNIAGRLGVISILLGLQGAIGWWMVKSGLDNKFMETDNSHPRVS 261
Query: 122 QYRLAAHLSXXXXXXXXXXXXXXXXXR-------PFPAAATLQKIKE--LKSITGLAHAV 172
YRLA HL R P A A K+ LK
Sbjct: 262 PYRLATHLGAAFVLYWAMLSTGVQVLRESRWIANPSSAVADFAKLNNPILKPFKRYTTVF 321
Query: 173 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI-----------KNFT 221
+ F+TA+SGAFVAGLDAG++YN+FP MG+ +P P +N
Sbjct: 322 CGLVFLTAMSGAFVAGLDAGMIYNTFPFMGEGIVPPKTELMDPLFAQKNDKSDLWWRNIF 381
Query: 222 ENPTTVQFDHRVLGXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAT 279
ENP TVQFDHRVL G++T
Sbjct: 382 ENPVTVQFDHRVLATTTFCASFALLLMSNRFKPFLPRKAFLACHSIMGIAMVQVTLGIST 441
Query: 280 LLCYVPTALAASHQAGSLVLLSLAVWLTHEVK 311
L+ VPT LAA+HQAG+L LLS A +L ++K
Sbjct: 442 LIYLVPTPLAAAHQAGALALLSAAAYLGAQLK 473
>UniRef50_A2QVS0 Cluster: Contig An11c0080, complete genome; n=2;
Pezizomycotina|Rep: Contig An11c0080, complete genome -
Aspergillus niger
Length = 505
Score = 195 bits (475), Expect = 1e-48
Identities = 119/324 (36%), Positives = 154/324 (47%), Gaps = 26/324 (8%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P N E+W+ EF KY+ PEF+ N ++T S+FK I+YME+ HR WGR +G
Sbjct: 141 WRPVTGSLPPMNAEDWESEFSKYRASPEFQLLNPHMTLSEFKSIYYMEWIHRLWGRFVGL 200
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
+ LPAAYF + M +R+A GL+ QG +GW+MVKSGL+D P PRVSQ
Sbjct: 201 SFVLPAAYFVAAKKVSKPMALRLAGIAGLIGFQGFIGWWMVKSGLKDDLFAPGSHPRVSQ 260
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXR-------PFPAAATLQKIKE--LKSITGLAHAVK 173
YRL AHL R P L +++ LK A+
Sbjct: 261 YRLTAHLGAAFVCYTAMLWNGLAILRSHRLLADPEAGIKLLDALRDPKLKIFRRSVAALA 320
Query: 174 AMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI-----------KNFTE 222
A+ F+TA+SGA VAGLDAGL+YN FP MG+ P F +N E
Sbjct: 321 ALVFVTAMSGALVAGLDAGLIYNEFPFMGNGLAPPKSELFDERYSRHEDRSDLWWRNMLE 380
Query: 223 NPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXGV 277
NP+ VQ DHR L G+
Sbjct: 381 NPSLVQLDHRALAITTFTSIMALLAYTRGSPTMKRLLPPAAKKGVHGVVAFACMQVGLGI 440
Query: 278 ATLLCYVPTALAASHQAGSLVLLS 301
+TLL VPT LA++HQAGSL LL+
Sbjct: 441 STLLYLVPTPLASAHQAGSLFLLT 464
>UniRef50_Q5D9X3 Cluster: SJCHGC06866 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06866 protein - Schistosoma
japonicum (Blood fluke)
Length = 221
Score = 192 bits (467), Expect = 1e-47
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 13/207 (6%)
Query: 38 ITFSDFKWIWYMEFAHRTWGRAIGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGL 97
++F+ FK+IWYMEF HR WGR IGAA PA YF+Y+G MK RV +Y GL+ QG+
Sbjct: 1 MSFNRFKFIWYMEFIHRMWGRTIGAAFVFPAVYFFYKGYFSSKMKYRVFIYGGLIGLQGV 60
Query: 98 MGWYMVKSGLED--RFHGPS------DVPRVSQYRLAAHLSXXXXXXXXXXXXXXXXXRP 149
+GW MV+SGL++ R G S VPRV Y L AHL
Sbjct: 61 LGWLMVRSGLKEPRRPAGLSANENYVGVPRVDHYWLCAHLISAIVLYSLLLWNSFSHLAS 120
Query: 150 FPAAATLQKIKELKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDD 209
P +K+LK+ L H KA+T T + GAFVAGLDAGL+YNS+PKM D W+PDD
Sbjct: 121 HPEVKPFNGVKQLKA---LGHTGKALTLATIIYGAFVAGLDAGLIYNSWPKMADRWIPDD 177
Query: 210 ILA--FSPTIKNFTENPTTVQFDHRVL 234
++ + T+KNF +NPT VQF HR+L
Sbjct: 178 LIVSRYGSTVKNFLDNPTAVQFTHRML 204
>UniRef50_Q5K7Z7 Cluster: Cytochrome c oxidase biogenesis-related
protein, putative; n=1; Filobasidiella neoformans|Rep:
Cytochrome c oxidase biogenesis-related protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 452
Score = 191 bits (466), Expect = 2e-47
Identities = 118/316 (37%), Positives = 154/316 (48%), Gaps = 16/316 (5%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W + G P +E+W E+EKY+ PE N NI+ +FK I+YME+ HR GRA
Sbjct: 116 IVEWNPITGILPPITKEDWDAEWEKYKVSPEGIIMNANISRDEFKKIFYMEWGHRLAGRA 175
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
+G LP Y+ R L + ++ + + QG++GW+MVKSGL+++ + VPR
Sbjct: 176 LGIGFLLPTVYYLARYKLPRPLPTKLLLIGLGIGFQGVLGWWMVKSGLDEQIITDNSVPR 235
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPF-----PAAATLQKIKELKSITGLAHAVKA 174
VSQYRLAAH S R PA + I +K GL H
Sbjct: 236 VSQYRLAAHYSAAVALYLGMLSTAIGIQRDMKLAKNPAIVSALNIPAVKKFRGLVHLSGM 295
Query: 175 MTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLP------DDILAFSPTIK---NFTENPT 225
M +TAV+GAFVAGLDAGLVYN FP MGD +P D A S + K N ENP
Sbjct: 296 MVALTAVTGAFVAGLDAGLVYNEFPMMGDGLVPPKDELFDQRYARSGSDKIWRNMLENPV 355
Query: 226 TVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVP 285
T QFDHRVL G++TLL VP
Sbjct: 356 TAQFDHRVL-ATTTFTILCTLPFAARRLPFPAARRLAALTTAAAVTQVTLGISTLLYLVP 414
Query: 286 TALAASHQAGSLVLLS 301
+LA+ HQ GS+VLL+
Sbjct: 415 ISLASMHQTGSVVLLT 430
>UniRef50_A1CT55 Cluster: Cytochrome C oxidase assembly protein
cox15; n=13; Pezizomycotina|Rep: Cytochrome C oxidase
assembly protein cox15 - Aspergillus clavatus
Length = 503
Score = 186 bits (452), Expect = 9e-46
Identities = 117/328 (35%), Positives = 155/328 (47%), Gaps = 34/328 (10%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P N E+W+ EF KY+ PEF+ N N+ S+FK I+YME+ HR WGR IG
Sbjct: 139 WRPVTGSLPPMNAEDWESEFAKYRASPEFQLLNPNMNLSEFKSIYYMEWIHRLWGRFIGL 198
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
+ PA YF + + M +R+A GL+ QG +GW+MVKSGL++ PRVSQ
Sbjct: 199 SFVFPALYFVAKKKVSKPMALRLAGIAGLIGFQGFIGWWMVKSGLKEDLFAQGSHPRVSQ 258
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPF-----PAAAT--LQKIKELK------SITGLA 169
YRL AHL+ R P A T L +++ K S+ GLA
Sbjct: 259 YRLTAHLAAAFVCYTAMLWNGLAILRSHRLLADPEAGTKVLDALRDPKLNIFRRSVAGLA 318
Query: 170 HAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI-----------K 218
+TF+T +SG VAGLDAGL+YN FP MG+ P F P +
Sbjct: 319 ----LLTFVTVMSGGLVAGLDAGLIYNEFPFMGNGLTPPKAELFDPRYSRHEDRSDLWWR 374
Query: 219 NFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXX 273
N ENP+ VQ DHR++
Sbjct: 375 NMLENPSLVQLDHRIMAMTTFTSIMALWAYTRRSPTMKRLLPPAAKKGVHGVVAFACVQV 434
Query: 274 XXGVATLLCYVPTALAASHQAGSLVLLS 301
G++TLL VP LA++HQAGSL LL+
Sbjct: 435 SLGISTLLYLVPLPLASAHQAGSLCLLT 462
>UniRef50_P40086 Cluster: Cytochrome c oxidase assembly protein
COX15; n=10; Saccharomycetales|Rep: Cytochrome c oxidase
assembly protein COX15 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 486
Score = 175 bits (427), Expect = 9e-43
Identities = 107/332 (32%), Positives = 156/332 (46%), Gaps = 24/332 (7%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P N++EW++EF KY++ PEFK N +I +FK+I++ME+ HR WGRAIGA
Sbjct: 119 WKPVTGTLPPMNQKEWEEEFIKYKESPEFKLLNSHIDLDEFKFIFFMEWIHRLWGRAIGA 178
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGL-EDRFHGPSDVPRVS 121
LPA YF + R+ GL+ QG +GW+MVKSGL +++ P VS
Sbjct: 179 VFILPAVYFAVSKKTSGHVNKRLFGLAGLLGLQGFVGWWMVKSGLDQEQLDARKSKPTVS 238
Query: 122 QYRLAAHLSXXXXXXXXXXXXXXXXXR-------PFPAAATLQKIKE--LKSITGLAHAV 172
QYRL HL R P A + +K+ + + ++ A+
Sbjct: 239 QYRLTTHLGTAFFLYMGMLWTGLEILRECKWIKNPVQAISLFKKLDNPAIGPMRKISLAL 298
Query: 173 KAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI-----------KNFT 221
A++F+TA+SG VAGLDAG VYN++PKMG+ W P +N
Sbjct: 299 LAVSFLTAMSGGMVAGLDAGWVYNTWPKMGERWFPSSRELMDENFCRREDKKDLWWRNLL 358
Query: 222 ENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXGVAT 279
ENP TVQ HR G+ T
Sbjct: 359 ENPVTVQLVHRTCAYVAFTSVLAAHMYAIKKKAVIPRNAMTSLHVMMGVVTLQATLGILT 418
Query: 280 LLCYVPTALAASHQAGSLVLLSLAVWLTHEVK 311
+L VP +LA+ HQAG+L LL+ ++ +++
Sbjct: 419 ILYLVPISLASIHQAGALALLTSSLVFASQLR 450
>UniRef50_A5DKK4 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 495
Score = 175 bits (425), Expect = 2e-42
Identities = 116/326 (35%), Positives = 149/326 (45%), Gaps = 28/326 (8%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P NEEEW EF KYQ PEFK N +IT +FK+I+ ME+ HR GRAIG
Sbjct: 140 WKPVTGTLPPMNEEEWIVEFTKYQDLPEFKLLNSHITLDEFKFIYSMEWGHRLVGRAIGM 199
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGL-EDRFHGPSDVPRVS 121
A LP YFW G L K L+ QG +GW+MV+SGL E++ P VS
Sbjct: 200 AFILPGLYFWGTGRLNTRTKRLCFGLTLLLGLQGAIGWWMVQSGLDEEQLTERRSKPTVS 259
Query: 122 QYRLAAHLSXXXX-------XXXXXXXXXXXXXRPFPAAATLQKI------KELKSITGL 168
QYRL HL + A +QK+ + + +
Sbjct: 260 QYRLTTHLGAAFLLYLGVLWLAFEIINENKWLKQATKAPEKVQKVFAQLLSARIAPVRTV 319
Query: 169 AHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTI----------- 217
A+ +TFITA+SG VAGLDAGL+YN+FP MGD++LP SP
Sbjct: 320 GTALLGLTFITALSGGMVAGLDAGLIYNTFPHMGDDYLPSSGELMSPVYARKEDLSDLWW 379
Query: 218 KNFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXX 275
+N ENPTTVQ HR+
Sbjct: 380 RNLLENPTTVQLVHRIFATTTFFSILAAHMFVIKRKQYIPKPAQRALHGMMGLVLLQVSL 439
Query: 276 GVATLLCYVPTALAASHQAGSLVLLS 301
G+ TL+ VP LAA+HQAG+L LL+
Sbjct: 440 GITTLIYLVPIPLAAAHQAGALALLT 465
>UniRef50_A4AD07 Cluster: Cytochrome oxidase assembly protein; n=2;
unclassified Gammaproteobacteria|Rep: Cytochrome oxidase
assembly protein - Congregibacter litoralis KT71
Length = 356
Score = 173 bits (421), Expect = 5e-42
Identities = 101/312 (32%), Positives = 148/312 (47%), Gaps = 14/312 (4%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
MV WR ++G P E WQ+ F KYQ++PE++ NQ + +FK I+ E+ HR GR
Sbjct: 44 MVEWRPIMGIWPPIGEAAWQEVFAKYQRFPEYQKINQGMGLDEFKVIFMYEYLHRVLGRL 103
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
IG +P +F RG++ P + R+ V L QGL+GWYMVKSGL DR P
Sbjct: 104 IGLLFIIPLVFFALRGVIRPGLMPRLLVLLVLGGCQGLLGWYMVKSGLVDR-------PS 156
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAH---AVKAMT 176
VSQYRL AHL +P A K S+ G+A + +
Sbjct: 157 VSQYRLTAHLGLAVALYAAILWQFLNL---WPKAGRRSKSSSTASLAGVARWSPLLVVLV 213
Query: 177 FITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGX 236
++ +SG VAG DAG Y ++PKMG ++P + A +P+ E+ TT+QF+HR+
Sbjct: 214 YLMILSGGLVAGTDAGYAYPTWPKMGPGFVPPGLYAATPSWLAAFEDVTTIQFNHRLFAY 273
Query: 237 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGS 296
G+ TLL + +AA HQAG+
Sbjct: 274 LLFFLVGGFGLFLALKASGTALRLAGGAVMAALLLQITLGIGTLLTRMAIPVAAGHQAGA 333
Query: 297 LVLLSLAVWLTH 308
++LL++ ++ H
Sbjct: 334 ILLLTVLLFTVH 345
>UniRef50_UPI00006CA44C Cluster: Cytochrome oxidase assembly
protein; n=1; Tetrahymena thermophila SB210|Rep:
Cytochrome oxidase assembly protein - Tetrahymena
thermophila SB210
Length = 447
Score = 171 bits (415), Expect = 3e-41
Identities = 95/312 (30%), Positives = 145/312 (46%), Gaps = 2/312 (0%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
M W+ + K+P+ +EEW+KEF+ Y++YPE++ N+N+ + FK I+++E+AHR WG ++
Sbjct: 117 MTKWKPIDHKLPSTQEEWEKEFDNYKKYPEYQLVNKNMDLNGFKKIFFVEWAHRLWGSSL 176
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRV 120
G +P F G L M R+ GL QGL+GW+MVKSG E + PRV
Sbjct: 177 GILFGVPLLGFAALGWLKKPMFFRLTAMLGLGGLQGLIGWWMVKSGFEQK-PDYQTKPRV 235
Query: 121 SQYRLAAHLSXXXXXXXXXXXXXXXXXR-PFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
S YRL HL+ R P A L + K++ GL + +
Sbjct: 236 SVYRLFTHLNMAIVLYGALLWNGLTLIRKPQQQALQLSHLAGTKTMRGLGIGLLHFVALN 295
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
+SGA VAG+DAG +N++P M +PD ++ P NF EN VQF+HR
Sbjct: 296 IMSGAIVAGIDAGKGFNTWPDMNGQMIPDGLMKRDPWYLNFFENRVLVQFNHRNCAYLTA 355
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ LL P ++ HQA +L+
Sbjct: 356 SWTGYMLYKSLSLNLAKHQRFQIGLLSFFILYQIASGITVLLHGAPPKESSGHQATALMT 415
Query: 300 LSLAVWLTHEVK 311
+++A+ H +
Sbjct: 416 VTVALLTCHSFR 427
>UniRef50_A5Y0M4 Cluster: Putative cytochrome c oxidase assembly
protein; n=1; Starmerella bombicola|Rep: Putative
cytochrome c oxidase assembly protein - Starmerella
bombicola
Length = 485
Score = 167 bits (405), Expect = 4e-40
Identities = 111/336 (33%), Positives = 158/336 (47%), Gaps = 27/336 (8%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ L G P +EE+W ++F Y++ PEFK N +++ ++K+I+YME+AHR WGRAIG
Sbjct: 135 WKPLTGALPPISEEDWIEQFNLYKESPEFKELNAHMSLEEYKFIYYMEWAHRLWGRAIGL 194
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDR-FHGPSD-VPRV 120
+ LP AYF +R P R+ L+ QG +GW+MV SGL+ + +D PRV
Sbjct: 195 LVLLPGAYFVWRRRTSPQTNRRLLGISLLLGLQGAIGWWMVHSGLDRKNLDARADSQPRV 254
Query: 121 SQYRLAAHLSXXXXXXXXXXXXXXXXXR-------PFPAAATLQKIKELKSI--TGLAHA 171
S YRLA HL R P A +TL + + + A
Sbjct: 255 SHYRLATHLGAAFLLYMAMTMTGLGILRQHRFMKDPVKAMSTLTVLSSPLATWPRRFSIA 314
Query: 172 VKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAF--------SPT-----IK 218
+ + F+T++SG+FVAGLDAGL+YNSFP MG P F +P+ K
Sbjct: 315 LLCLGFLTSMSGSFVAGLDAGLLYNSFPMMGLGLTPSSSELFDKRYTGEQNPSAWTLFYK 374
Query: 219 NFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXG 276
N +NP TVQ HR+L G
Sbjct: 375 NVLDNPVTVQLTHRILAVSTWTATLAFLLYATKRKSLLPIKVYKGAHGVFGFATLQAALG 434
Query: 277 VATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKL 312
+ TL+ VP AA HQAG+L L+ + L + ++L
Sbjct: 435 ITTLVYVVPIETAALHQAGALAFLTSILILVNRLRL 470
>UniRef50_Q4Q7Z4 Cluster: Cytochrome oxidase assembly protein-like
protein; n=5; Trypanosomatidae|Rep: Cytochrome oxidase
assembly protein-like protein - Leishmania major
Length = 415
Score = 161 bits (390), Expect = 3e-38
Identities = 105/312 (33%), Positives = 148/312 (47%), Gaps = 14/312 (4%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W+ + G + P +EEW KEF YQ++PEFK K N+T +F++I++ E+AHR R
Sbjct: 96 LVEWKPISGVRPPLTDEEWDKEFRHYQEFPEFKQK-PNMTLREFQFIFFWEWAHRVLARG 154
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVY--CGLVAAQGLMGWYMVKSGLEDRFHGPSDV 117
+G P Y+ RG + K + GL AAQG MGWYMV SGL+++
Sbjct: 155 LGLVFGGPLLYYAGRGYFKGNGKFLAGLVGILGLGAAQGFMGWYMVTSGLDNKLLEERKK 214
Query: 118 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTF 177
VS YRLAAHL P A ++ +++ ++ AM F
Sbjct: 215 ATVSAYRLAAHL--ILAFTIYSFMLRMGYGLKLPVMAPFPRMAKVQLWLRMSF---AMMF 269
Query: 178 ITAVSGAFVAGLDAGLVYN-SFPKMGDNWLP--DDILAFSPTIKNFTENPTTVQFDHRVL 234
+TA+SGAFVAGLDAGL+YN FP M P D + A PT +NF EN + VQ HRV+
Sbjct: 270 VTAISGAFVAGLDAGLLYNDDFPWMAGGVFPPADHLFALEPTWRNFFENHSMVQTTHRVM 329
Query: 235 GXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASH 292
G+ T++ V +A SH
Sbjct: 330 AGATFLTITGLNVAASRRRGFIPPPVFRNLMFVNTALLFQVSLGMWTVMSTVYVPVAVSH 389
Query: 293 QAGSLVLLSLAV 304
Q G+L+LL+ +
Sbjct: 390 QMGALILLTTLI 401
>UniRef50_Q82X64 Cluster: Cytochrome oxidase assembly; n=4;
Proteobacteria|Rep: Cytochrome oxidase assembly -
Nitrosomonas europaea
Length = 359
Score = 160 bits (388), Expect = 5e-38
Identities = 93/311 (29%), Positives = 143/311 (45%), Gaps = 10/311 (3%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W+ ++G P ++ +W+ EKY+Q P+++ N+ +T +FK I++ E+ HR GR
Sbjct: 57 IVEWKPIVGTIPPISQGDWEILLEKYRQIPQYEQINKGMTLDEFKGIFWWEYFHRLLGRL 116
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
IG F+P YF R + + ++ L QGLMGWYMV SGL D +
Sbjct: 117 IGLVYFVPFVYFMVRKRVDRVLGTKLLGIFVLGGLQGLMGWYMVMSGLADNVY------- 169
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VSQYRL AHL P + ++ + A + + F
Sbjct: 170 VSQYRLTAHLGLAFIIYAAMFWVATGLLSPVNTHSA--DPASVRKLGRFARILTGLIFFM 227
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
+SG VAG+ AG YN+FP M ++P + P +NF +N TTVQFDHR++
Sbjct: 228 VLSGGLVAGIHAGKAYNTFPLMDGFFIPPALFVLEPWYRNFFDNITTVQFDHRMIAWLLM 287
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ TLL VP AA+HQAG+++L
Sbjct: 288 FTIPLFWFKARQLSLSWSGRLACHLLLIMLCTQVALGITTLLLSVPLTFAAAHQAGAVLL 347
Query: 300 LSLAVWLTHEV 310
+ A+W+ ++
Sbjct: 348 FTAALWVCRKL 358
>UniRef50_Q10361 Cluster: Electron transfer protein 1, mitochondrial
precursor; n=22; cellular organisms|Rep: Electron
transfer protein 1, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 631
Score = 157 bits (381), Expect = 4e-37
Identities = 102/334 (30%), Positives = 151/334 (45%), Gaps = 27/334 (8%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P +E+W +EFE Y++ PEF+ N ++T +FK I++ E+ HR GR IG
Sbjct: 131 WKPITGVIPPLTDEQWNQEFELYKKSPEFEKLNSHMTVDEFKNIFFWEWFHRVLGRGIGL 190
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
+ LP+ Y P + R+ GLV QG++GW+MVKSGL + PRVS
Sbjct: 191 TILLPSIYMIVTKRASPWLSKRLIGLTGLVGLQGVIGWWMVKSGLSEELFSDGSHPRVSH 250
Query: 123 YRLAAHLSXXXXX------XXXXXXXXXXXXRPFPAAATLQ------KIKELKSITGLAH 170
YRLA HL+ + + +T Q ++++K +
Sbjct: 251 YRLATHLAAAVALYIGLVWTGHGILQRHAFLKSMKSGSTSQLTSMVSSVQKMKGFRTSVN 310
Query: 171 AVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWL-PDDILAFSPTI-----------K 218
+ + IT +SGAFVAGLDAG++Y +FP+MG+ L P F +
Sbjct: 311 SFVGLVLITLLSGAFVAGLDAGMIYCTFPEMGEGRLAPSKSELFDQRFCRKDDKSDLIWR 370
Query: 219 NFTENPTTVQFDHRVLGXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 276
N +NP+ VQ +HR+L G
Sbjct: 371 NMIDNPSLVQLEHRILAITTFVAACGLFIFSRAKRNILPKKIKTSINVVTGVVTAQATLG 430
Query: 277 VATLLCYVPTALAASHQAGSLVLLSLAVWLTHEV 310
+ TL+ VP LAA HQAGSLV L+ A+ L +
Sbjct: 431 IMTLIYVVPVPLAALHQAGSLVTLTAALSLAQRL 464
>UniRef50_Q8G1D1 Cluster: Cytochrome c oxidase assembly protein,
putative; n=20; Alphaproteobacteria|Rep: Cytochrome c
oxidase assembly protein, putative - Brucella suis
Length = 358
Score = 149 bits (361), Expect = 9e-35
Identities = 91/293 (31%), Positives = 132/293 (45%), Gaps = 14/293 (4%)
Query: 12 PTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGAAMFLPAAYF 71
P N EW +EFEKYQQ P+++ N+ ++ ++F++I++ E+AHR R +G + +P +F
Sbjct: 68 PLNHAEWVEEFEKYQQIPQYQQINKGMSLAEFQYIFWWEWAHRLLARFVGFLVAVPLGFF 127
Query: 72 WYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQYRLAAHLSX 131
W G L +K R+ L QG +GW+MV SGL S++ VSQYRLA HL+
Sbjct: 128 WLTGRLKGGLKYRMLGLLALGGLQGAIGWWMVASGL-------SELTSVSQYRLAIHLTT 180
Query: 132 XXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVSGAFVAGLDA 191
T + +SI A + + G VAGL A
Sbjct: 181 ACVIITAVFYIAR-------GLVTYSERPAERSIQRFAGWIVFAVLVQIYLGGLVAGLHA 233
Query: 192 GLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXX 251
GL YN++P M +P D+ +P +N ENP TVQF HR+
Sbjct: 234 GLTYNTWPLMDGAIIPSDLFTQAPWWRNLFENPKTVQFVHRMFAYTVLLLAILHAVQVWK 293
Query: 252 XXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSLAV 304
G+ATLL P L +HQ +LV+L+ AV
Sbjct: 294 NAPGTTHARRTIVLVGLVFIQAMIGIATLLMSAPLHLGLTHQFFALVVLAFAV 346
>UniRef50_A0CRQ7 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 413
Score = 149 bits (360), Expect = 1e-34
Identities = 93/312 (29%), Positives = 135/312 (43%), Gaps = 3/312 (0%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
M W+ + P N+ +W+KEF+ Y+Q+PE Y++ I FK I+ +E+ HR G +
Sbjct: 90 MTKWKPIEYAYPRNQADWEKEFDYYKQFPE--YQHTPIDLEKFKKIFIVEYLHRVSGSTL 147
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRV 120
GA LP A F + P R+ GL QGL+GW+MVKSGL+ PRV
Sbjct: 148 GALYVLPLAAFTAMKWIKPQYAKRLGTIGGLGLLQGLIGWWMVKSGLDRPKPEYQQKPRV 207
Query: 121 SQYRLAAHLSXXXXXXXXXX-XXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
S YRL HLS +P T + K GL + + I
Sbjct: 208 STYRLTVHLSMALSLYSLLIWNAATLFKKPQHLQITPENYKTHLKFRGLGIGLIHLVAIN 267
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
++GA +AG+DAG V+N++P M +P ++ SP KNF EN VQF+HR
Sbjct: 268 LLTGAAMAGIDAGKVFNTWPTMNGQIVPANLFKASPFYKNFFENVVMVQFNHRNAAYLTY 327
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ LL V + HQ +L +
Sbjct: 328 TFGSYITYLAYKSNLPKQARYMCYALYGVLNYQLLTGIVALLNQVQVHSGSIHQFNALNV 387
Query: 300 LSLAVWLTHEVK 311
L+ ++ L H V+
Sbjct: 388 LTASLLLCHSVR 399
>UniRef50_Q2W552 Cluster: Uncharacterized protein required for
cytochrome oxidase assembly; n=2; Magnetospirillum|Rep:
Uncharacterized protein required for cytochrome oxidase
assembly - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 354
Score = 147 bits (357), Expect = 3e-34
Identities = 96/311 (30%), Positives = 141/311 (45%), Gaps = 12/311 (3%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
MV W + G P N+ +WQ FEKY+Q PE+ N ++ ++FK I+++E+ HR WGR
Sbjct: 51 MVEWEPIRGIIPPLNDTDWQLFFEKYKQTPEYIKVNAGMSLAEFKGIFWLEYIHRVWGRL 110
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
IG LP + G + M R+A L AAQG MGW+MVKSGL D P
Sbjct: 111 IGVVFGLPFLWLALSGRIGRAMVPRLAGVFLLGAAQGGMGWFMVKSGLVDN-------PA 163
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VS YRL AHL+ + + ++ ++ + + +T
Sbjct: 164 VSHYRLTAHLALAFLIHGWMFWLALDILADH-RSTRRRAHGDVGAVRSWMLGLTGLVIVT 222
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
+ G VAGL AGL+YN++P M +P D+ F + E+ TVQF HR L
Sbjct: 223 LLFGGLVAGLKAGLIYNTWPLMDGAIVPKDL--FPEGFHSLFEDIKTVQFGHRTL-AEIT 279
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ TL+ VP LA++HQ G++ L
Sbjct: 280 IVVALVGWFRTRARLGTQTPAAIHAVGLMALLQVGLGIGTLVMVVPVWLASAHQMGAMAL 339
Query: 300 LSLAVWLTHEV 310
L+L +W H++
Sbjct: 340 LTLCLWALHDL 350
>UniRef50_Q4UKQ2 Cluster: Cytochrome c oxidase assembly protein;
n=8; Rickettsia|Rep: Cytochrome c oxidase assembly
protein - Rickettsia felis (Rickettsia azadi)
Length = 337
Score = 145 bits (351), Expect = 2e-33
Identities = 97/312 (31%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V WR + G P + E WQ EF KY+ +PE+ N +T S FK+I+ +EF HR GR
Sbjct: 36 IVEWRPVTGILPPFSFESWQAEFAKYKAFPEYNSINYGMTLSQFKFIYLLEFVHRLLGRI 95
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
+P YF+++ ++ + + L QG MGWYMVKSGL + P
Sbjct: 96 TALIYIVPLIYFYFKDVIKNRDILPYIIALLLFCVQGFMGWYMVKSGL-------LNSPS 148
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VS +RLA HL + +K +G+A V ++
Sbjct: 149 VSHFRLAFHLIIAVIIYHILFYQLIKNRCDILLIPSQTDLKLPLIFSGIAITV---IYVQ 205
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
GA VAGLDAGL+YNSFP MGDN++P +I + N +P +QF HR LG
Sbjct: 206 IFLGAMVAGLDAGLIYNSFPLMGDNFIPMEIKDNFFNLANL-HDPVFIQFIHR-LGGYSV 263
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ TLL VP +A+ HQ +++L
Sbjct: 264 FLVVVVLVICLLKIEHPKLNKIAYFLMIALLMQISTGIITLLYSVPIIIASIHQLFAIIL 323
Query: 300 LSLAVWLTHEVK 311
LS+ +W +K
Sbjct: 324 LSIIIWCYFIIK 335
>UniRef50_Q6N660 Cluster: Possible cytochrome c oxidase assembly
protein precursor; n=10; Rhizobiales|Rep: Possible
cytochrome c oxidase assembly protein precursor -
Rhodopseudomonas palustris
Length = 368
Score = 143 bits (346), Expect = 6e-33
Identities = 97/307 (31%), Positives = 141/307 (45%), Gaps = 20/307 (6%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W+ + G P + +W F+ Y+Q P+++ N +T FK I++ E++HR GR
Sbjct: 45 IVEWKPVTGSLPPLTDTQWHAAFDGYKQIPQYRELNAGMTLDQFKTIFWWEWSHRLLGRV 104
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
IG LP +F +RG + P+ K + + L A QG +GW+MV SGL R
Sbjct: 105 IGIVYLLPFLWFLWRGAIGPEWKRALWIIFALGALQGAVGWWMVASGLSQR-------TE 157
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VSQ RLA HLS AA ++ +T L A+ +TF+
Sbjct: 158 VSQVRLATHLSLALIIYAAIVWTLRRMADGARVAAPVR-----LRVTAL--ALLGLTFVQ 210
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAF--SPTIKNFTENPTTVQFDHRVLGXX 237
+GA VAGL AG +YN++P++ +PD + SP KN +N TVQFDHR+L
Sbjct: 211 LYAGALVAGLRAGRLYNTWPEIDGALIPDAARLWFESPWWKNLFDNHLTVQFDHRML--- 267
Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSL 297
G+ T+L P LA HQA +L
Sbjct: 268 AYALWTLAALHMIDALRTRAAARGAVQLFLALTAQATLGIFTVLYAAPIDLALVHQAMAL 327
Query: 298 VLLSLAV 304
V+L+LAV
Sbjct: 328 VVLTLAV 334
>UniRef50_Q5UF25 Cluster: Cytochrome c oxidase assembly protein,
putative; n=1; uncultured alpha proteobacterium
EBAC2C11|Rep: Cytochrome c oxidase assembly protein,
putative - uncultured alpha proteobacterium EBAC2C11
Length = 354
Score = 140 bits (340), Expect = 3e-32
Identities = 100/309 (32%), Positives = 138/309 (44%), Gaps = 25/309 (8%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
MV WR L+G P EWQ+ ++ YQ PE++ N ++ S+FK I++ E+ HR WGR
Sbjct: 52 MVEWRPLMGTLPPMTTLEWQRVYQLYQASPEYQQLNYGMSLSNFKTIFFWEYFHRLWGRL 111
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
+G LP G + R+ + L QG++GW+MVKSGL ++
Sbjct: 112 LGLTFGLPLIALALTGRVPNGFGRRLFLLLLLGGFQGVVGWWMVKSGL-------TETAS 164
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VSQYRLA HLS F + TG A + IT
Sbjct: 165 VSQYRLATHLSLALIIFSLLVWTG------FDLRDGCDRYP-----TGQGLATLILLGIT 213
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
V+GA VAG+DAGL+YN +P MGD+ LP + + + F ENP + QF HR LG
Sbjct: 214 IVAGALVAGMDAGLLYNEYPLMGDSLLPIE-YGEAGWLDPF-ENPASAQFHHRWLG---- 267
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ TLL VP +L HQAG+++L
Sbjct: 268 ALTFAAVIVLGLKERSASSAFRSNLVVAAVSLQFTLGIVTLLHGVPVSLGGMHQAGAVIL 327
Query: 300 LSLAVWLTH 308
L + L H
Sbjct: 328 LGCLLALLH 336
>UniRef50_Q89KD9 Cluster: Cytochrome oxidase assembly factor; n=3;
Rhizobiales|Rep: Cytochrome oxidase assembly factor -
Bradyrhizobium japonicum
Length = 360
Score = 140 bits (339), Expect = 4e-32
Identities = 96/313 (30%), Positives = 147/313 (46%), Gaps = 18/313 (5%)
Query: 1 MVTWRLL-GEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W+L+ G P + +W + FE Y++ P+++ N ++ S+FK I++ E++HR GR
Sbjct: 44 IVEWKLVTGSLPPLSAAQWTEAFEAYKKIPQYRELNAGMSLSEFKEIFWWEWSHRLLGRF 103
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
IG A LP +F +RG L ++K R+ + L QG +GW+MV SGL +R
Sbjct: 104 IGVAYLLPFLFFLWRGGLSRELKRRLWLLFALGGLQGAVGWWMVASGLSERV-------E 156
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VSQYRLA HL R A + L+ + L + +TF+
Sbjct: 157 VSQYRLATHL----VLALLIFAGIVWTVRRLKERAQIAAPARLRFTSAL---LLVVTFVQ 209
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPD-DILAF-SPTIKNFTENPTTVQFDHRVLGXX 237
GA VAGL AG YN++P++ +P + L F +P +N +N TVQF+HR +
Sbjct: 210 IYLGALVAGLRAGRAYNTWPEIDGALIPSAERLWFETPWWRNMFDNVLTVQFEHR-MTAY 268
Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSL 297
G+ TLL VP LA +HQA ++
Sbjct: 269 ALFVLAALHAFDAVRSRAGLAASGALWLFAAVSLQAVLGILTLLNQVPIGLALAHQAVAI 328
Query: 298 VLLSLAVWLTHEV 310
+L+LAV T +
Sbjct: 329 AVLTLAVMQTERL 341
>UniRef50_A5CF77 Cluster: Cytochrome c oxidase assembly protein;
n=1; Orientia tsutsugamushi Boryong|Rep: Cytochrome c
oxidase assembly protein - Orientia tsutsugamushi
(strain Boryong) (Rickettsia tsutsugamushi)
Length = 359
Score = 140 bits (338), Expect = 6e-32
Identities = 99/323 (30%), Positives = 141/323 (43%), Gaps = 22/323 (6%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+V W + G P + E+W EF KY PEFK N IT S+FK+I+++E+ HR GR
Sbjct: 39 IVEWNPVSGIIPPISSEDWNNEFNKYTASPEFKLINNQITISEFKYIFFIEYIHRLLGRI 98
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
G + +P F Y L R+ + LV QG MGWYMVKSGL+ + P
Sbjct: 99 TGIIIIIPFLIFCYLKSLTKLQYYRLLLITCLVVIQGFMGWYMVKSGLK-------ETPY 151
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPA---AATLQKIKELKSITGLAHAVKAMT 176
++ RLA HL +PF A + SI + +K +
Sbjct: 152 INHCRLAGHLLLAVIIYHQLIAELLIIIQPFKCYTLATSKANNSNSTSINVINLKIKLII 211
Query: 177 F---------ITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTV 227
F + GA VAGLDAGL+YN FP MGD+ +P +IL S F +N +
Sbjct: 212 FNKIIIFLLYTQIMFGALVAGLDAGLIYNEFPNMGDSLIPIEILNQSIDFTMF-DNQVLM 270
Query: 228 QFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTA 287
QF HR G G+ TLL +VP
Sbjct: 271 QFIHRWFG-ILISGLIICYAIWLIILNKHALRGMGMVAACLVLVQVTTGIITLLYHVPIL 329
Query: 288 LAASHQAGSLVLLSLAVWLTHEV 310
A +HQ G++++L+ +++ + V
Sbjct: 330 AALTHQVGAILILTTFLFIQNIV 352
>UniRef50_Q7RLI6 Cluster: Cytochrome c oxidase assembly protein;
n=6; Plasmodium|Rep: Cytochrome c oxidase assembly
protein - Plasmodium yoelii yoelii
Length = 433
Score = 140 bits (338), Expect = 6e-32
Identities = 98/328 (29%), Positives = 147/328 (44%), Gaps = 26/328 (7%)
Query: 4 WRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGAA 63
W++ G K P N+EEW EFEKY+ PE+K + N++ ++K I++ E+ HRT GR IG
Sbjct: 99 WKVNGVKYPQNDEEWINEFEKYKLTPEYKEVHYNMSLEEYKKIFFNEWLHRTVGRGIGLY 158
Query: 64 MFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQY 123
YF + L +M +++ GL A QG +GW+MVKSG + + + PRVS Y
Sbjct: 159 FISGVTYFLCKNSLKKNMLKKLSFIFGLGAFQGFVGWWMVKSGFK-KPETENKTPRVSPY 217
Query: 124 RLAAHLSXXXXXXXXXXXXX------XXXXRPFPAAAT-------LQKIK----ELKSIT 166
RL HL + F +++ L ++K E K IT
Sbjct: 218 RLVFHLFCATATYSYLFLNSLKLIEMGKLRKAFLNSSSKNWNEFLLNELKKEFYEKKHIT 277
Query: 167 -GLAHAVKAMTFI---TAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPT----IK 218
G+ + + F+ + G FVAG DAG YN++PKM D ++PD++ F K
Sbjct: 278 KGMKIGLLSFAFLVLSNIMYGGFVAGNDAGYAYNTWPKMIDKYIPDEVKKFYTNNITQYK 337
Query: 219 NFTENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVA 278
EN VQF+HR+L G++
Sbjct: 338 QLFENTAIVQFNHRMLSYLIVLNSFLLYFYSKTMALTKKTKKHFMVLPFITTTQMITGIS 397
Query: 279 TLLCYVPTALAASHQAGSLVLLSLAVWL 306
L+ +VP LA HQ G +L+ + L
Sbjct: 398 VLVHHVPIPLALVHQFGGFAVLTTILHL 425
>UniRef50_Q5FG54 Cluster: Cytochrome C oxidase assembly protein;
n=6; canis group|Rep: Cytochrome C oxidase assembly
protein - Ehrlichia ruminantium (strain Gardel)
Length = 359
Score = 139 bits (336), Expect = 1e-31
Identities = 97/314 (30%), Positives = 140/314 (44%), Gaps = 23/314 (7%)
Query: 6 LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGAAMF 65
++G P E+ W E KY PE+KY NIT ++FK ++ +E+ HR GR +G
Sbjct: 62 VIGIFPPVTEKMWIAEKIKYMATPEYKYITSNITLTEFKKLYLIEYFHRLLGRIVGLVFL 121
Query: 66 LPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQYRL 125
+P YF Y+ L ++ R + L+ QG+MGWYMVKSGL DR P VS YRL
Sbjct: 122 IPFLYFMYKQKLSKNLIHRFILIAFLILVQGVMGWYMVKSGLIDR-------PHVSHYRL 174
Query: 126 AAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELK-SITGLAHAVKAMTFITAVSGA 184
A HL + F + Q +K + T + + + ++ I GA
Sbjct: 175 AMHL-------LLALAIFYLLWKHFLLSVVHQIKCNIKVTNTSVFYIIISLITIQITCGA 227
Query: 185 FVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXXXX 244
VAGL+AGL+ P + D +D+L P N NP TVQF H V+
Sbjct: 228 LVAGLNAGLLSKDIPFLSDKVGLNDLLFIKPWWHNIYNNPITVQFIHEVI------ALLI 281
Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSLAV 304
G+ T + VP LA+ HQ + +L + ++
Sbjct: 282 LIIAVITLLVLKVRIFPMYLLLALLLIQLTLGILTFIYNVPIILASLHQVTAFILFASSI 341
Query: 305 WLTHEVKLL--KYI 316
+L H VKLL KY+
Sbjct: 342 YLLHYVKLLQIKYV 355
>UniRef50_A7AML1 Cluster: Cytochrome c oxidase assembly protein,
putative; n=1; Babesia bovis|Rep: Cytochrome c oxidase
assembly protein, putative - Babesia bovis
Length = 443
Score = 135 bits (327), Expect = 1e-30
Identities = 90/306 (29%), Positives = 130/306 (42%), Gaps = 5/306 (1%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
M+ W LLG+ +P +EEEW +EF KY+ PE++ + I D+K I+ E+ HR GR
Sbjct: 138 MLDWHLLGKYLPKDEEEWMEEFNKYKTTPEYQQVHFGIDLDDYKNIFINEWLHRMMGRTS 197
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRV 120
G A Y R L P V L Q +G +MV SG ++ + PRV
Sbjct: 198 GLFFGAGALYLALRRQLGPGGYFITLVVSALGLGQAFVGKWMVDSGFKE-LQTENRTPRV 256
Query: 121 SQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITA 180
S YRL H S + P A + +++ +A + F T
Sbjct: 257 SPYRLCIHFSNALAMYSICFWNGFKIIKSQPLLAPAPALLKVRR---MAMITLSSMFCTM 313
Query: 181 VSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXX 240
V G VAG DAGL YN++PKM D ++P+D + + K+ E +QF+HR LG
Sbjct: 314 VYGTLVAGNDAGLAYNTWPKMMDTFIPNDYAEVN-SAKHLFEKTGVIQFNHRCLGYITFL 372
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLL 300
GV T+L VP A +H ++VL
Sbjct: 373 MSLATYYKARSPGVPRAVRSLAMGVTHAAVLQIVIGVITVLKTVPLHGAMAHHTNAMVLW 432
Query: 301 SLAVWL 306
S+ + L
Sbjct: 433 SMLLML 438
>UniRef50_Q4ECP5 Cluster: Cytochrome c oxidase assembly protein;
n=5; Wolbachia|Rep: Cytochrome c oxidase assembly
protein - Wolbachia endosymbiont of Drosophila ananassae
Length = 350
Score = 134 bits (323), Expect = 4e-30
Identities = 91/303 (30%), Positives = 130/303 (42%), Gaps = 19/303 (6%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P +E++W +E KY+ PE+K N I+ +F+ I+ +E+ HR R G
Sbjct: 47 WKPITGTLPPLSEQDWLQEKLKYEATPEYKALNYGISMEEFRAIYLIEYIHRLVARLTGL 106
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
LP YF R + + I++ V A Q GWYMVKSGL + P VS
Sbjct: 107 VFVLPFIYFILRRKISKKVVIKLFVALLFGALQAFAGWYMVKSGLVAK-------PHVSH 159
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRLA HL + K+K + A + + I +
Sbjct: 160 YRLALHLLLALVIFALLSYQFF----DYQIRPQQTKLKVSGNTIYYARMILVLIVIQIIF 215
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXX 242
GAFVAGL+AGL+YN+FP M +P+D+ P N EN TVQF HR L
Sbjct: 216 GAFVAGLNAGLIYNTFPLMDGQIVPEDLFFLQPIWLNIFENRATVQFIHRAL-------A 268
Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSL 302
GV TLL ++P A+A +HQ S +L
Sbjct: 269 LLILTLVVILTVKNASIKPVYIMLLSVVIQIILGVITLLLHIPIAIAIAHQVFSFILFGS 328
Query: 303 AVW 305
+++
Sbjct: 329 SLY 331
>UniRef50_Q5PBP7 Cluster: Cytochrome C oxidase assembly protein;
n=2; Anaplasma|Rep: Cytochrome C oxidase assembly
protein - Anaplasma marginale (strain St. Maries)
Length = 341
Score = 132 bits (318), Expect = 2e-29
Identities = 82/232 (35%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ ++G P +E W +E EKY Q PE++++ +I+ DFK I+ +E+ HR +GRA+GA
Sbjct: 40 WQPIVGVVPPIGDEAWLREKEKYAQTPEYRHRAADISLDDFKRIYIIEYIHRLFGRALGA 99
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
LP YF + M ++ + L QG MGW+MVKSGL D PRVS
Sbjct: 100 VFCLPIPYFAITKRIDRAMVAKLLIVALLGGMQGAMGWFMVKSGL-------VDTPRVSH 152
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRLA HL A + A AV +T + V
Sbjct: 153 YRLAGHLFLTILLFSILWHSF------LRCAGVRSTTTTTNARFFTAAAVVGLTVLQMVL 206
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVL 234
GA VAGLDAGL YN+FP M +P + + F + T VQF HR++
Sbjct: 207 GALVAGLDAGLTYNTFPLMDGAIIPQSLFSAKLWHGGFLHDVTAVQFLHRLV 258
>UniRef50_Q5BVH5 Cluster: SJCHGC06865 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06865 protein - Schistosoma
japonicum (Blood fluke)
Length = 205
Score = 130 bits (315), Expect = 3e-29
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKY---KNQNITFSDFKWIWYMEFAHRTWG 57
MV W E P EE WQ EFEKY+++PE +Y ++ ++F+ FK+IWYMEF HR WG
Sbjct: 83 MVDWHPFKEVPPFKEEYWQAEFEKYKKFPEHEYYVKEHGEMSFNRFKFIWYMEFIHRMWG 142
Query: 58 RAIGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLED 109
R IGAA PA YF+Y+G MK RV +Y GL+ QG++GW MV+SGL++
Sbjct: 143 RTIGAAFVFPAVYFFYKGYFSSKMKYRVFIYGGLIGLQGVLGWLMVRSGLKE 194
>UniRef50_A7DDH6 Cluster: Cytochrome oxidase assembly; n=2;
Methylobacterium extorquens PA1|Rep: Cytochrome oxidase
assembly - Methylobacterium extorquens PA1
Length = 382
Score = 130 bits (314), Expect = 5e-29
Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 19/317 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P + +W EF+KY+ P+++ NQ I FK +++ E+ HR GR +G
Sbjct: 60 WRPVTGVVPPLDAADWAVEFDKYRDTPQYRILNQGIGLDGFKTLYWWEWGHRLLGRIVGL 119
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
FLP A+FW RGML + + + L QG +GW MV SGL+ + V+
Sbjct: 120 VFFLPFAWFWARGMLGRRLLLGLLGLGLLGGLQGAIGWIMVASGLQ------PGMTAVAP 173
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
+LA HL+ RP A + + + + GL + A+ +
Sbjct: 174 LKLALHLT-TASLILAGLVWLAAGTRPRALAPAPEPV---RVVAGL---LPALVLVQIWL 226
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFS--PTIKNFTENPTTVQFDHRVLGXXXXX 240
G VAG AGL+YN++P M +P + F P I+NF +N VQF+HR+
Sbjct: 227 GGLVAGSKAGLLYNTWPDMDGVLVPPARVLFDKVPFIENFIDNLALVQFNHRLFAYLVVV 286
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLL 300
G+ATLL +VP +HQ ++ +L
Sbjct: 287 VAIAHAIQAARTASGSAAAGRAMGLAALATAQMGLGIATLLLHVPLWAGLAHQVFAMAVL 346
Query: 301 SLAVWLTHEVKLLKYIP 317
+A T +L + +P
Sbjct: 347 IMA---TVHARLARGVP 360
>UniRef50_A5FA69 Cluster: Cytochrome oxidase assembly precursor;
n=5; Bacteroidetes|Rep: Cytochrome oxidase assembly
precursor - Flavobacterium johnsoniae UW101
Length = 341
Score = 130 bits (314), Expect = 5e-29
Identities = 93/315 (29%), Positives = 137/315 (43%), Gaps = 18/315 (5%)
Query: 1 MVTWRLLGEKMPT-NEEEWQKEFEKYQQYPEFKYKNQNITF--SDFKWIWYMEFAHRTWG 57
M W L+ + P + +WQ F++Y+++PE++ N + F SD+K+I++ E+ HR G
Sbjct: 38 MTDWHLVTDTFPPLTDAKWQAAFDEYKKFPEYQKINIHNDFQLSDYKFIYFWEWFHRFIG 97
Query: 58 RAIGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDV 117
R IG F+P YF + L + V + A QG +GW+MV+SGL D
Sbjct: 98 RIIGLVFFVPFVYFLAKKKLDTSTIKKCIVLLAMGAFQGFLGWFMVRSGLIDN------- 150
Query: 118 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTF 177
P VS +RL+ HL+ P + KI L++I A A
Sbjct: 151 PDVSHFRLSLHLTFAFITFAYTLWVALDLIYP---ERNINKILPLRNI---ARYALAALL 204
Query: 178 ITAVSGAFVAGLDAGLVYNSFPKMGD-NWLPDDI-LAFSPTIKNFTENPTTVQFDHRVLG 235
I + G FVAGL+AGL++N +P M D ++ + + + S IKN E + VQF HR
Sbjct: 205 IQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFIEQSSLIKNLIEGKSGVQFVHRTFA 264
Query: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAG 295
GV TLL VP AL HQ
Sbjct: 265 YAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFIQFLLGVFTLLYSVPLALGLIHQIM 324
Query: 296 SLVLLSLAVWLTHEV 310
+ LLS + H +
Sbjct: 325 AFFLLSAMTYTLHRL 339
>UniRef50_A5NUF6 Cluster: Cytochrome oxidase assembly; n=2;
Alphaproteobacteria|Rep: Cytochrome oxidase assembly -
Methylobacterium sp. 4-46
Length = 360
Score = 130 bits (313), Expect = 6e-29
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 16/304 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P + E W +EF KY+ P++ N+ ++ ++F+ I+ E+ HR GR IG
Sbjct: 59 WKPVTGAVPPLSAEAWAEEFAKYRATPQYDILNRGMSLAEFQVIYAWEWGHRFLGRLIGL 118
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
FLP +FW+ G L + + + L QG +GW MV SGL+ P V V+
Sbjct: 119 CFFLPLGWFWWTGRLDRRLGLGLVGLGVLGGLQGAVGWIMVASGLQ-----PGMV-AVAP 172
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
+LAAHL+ RP AAA + L+ +T L + T +
Sbjct: 173 IKLAAHLTLASAIFAGLVWLAAGLDRPAEAAAP----RRLR-LTAL--LLPVATLLQIAL 225
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLP--DDILAFSPTIKNFTENPTTVQFDHRVLGXXXXX 240
G VAG AGL YN++P M ++P + A +P I+NF +N VQ +HR++
Sbjct: 226 GGLVAGSKAGLTYNTWPLMDGAFIPPVSGLFAATPWIENFVDNVALVQLNHRLVAYALLA 285
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLL 300
G+ TLL VP +HQ ++++L
Sbjct: 286 LALLHALDARRARPGSGAARRAAALAGLVAAQAMLGITTLLLAVPLWAGLAHQVTAMLVL 345
Query: 301 SLAV 304
+AV
Sbjct: 346 GMAV 349
>UniRef50_Q1GWK6 Cluster: Cytochrome oxidase assembly precursor;
n=3; Sphingomonadales|Rep: Cytochrome oxidase assembly
precursor - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 355
Score = 128 bits (308), Expect = 2e-28
Identities = 83/230 (36%), Positives = 119/230 (51%), Gaps = 13/230 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P NE +W +EFEKY+Q PE+K N +T + FK I++ E+ HR GR +G
Sbjct: 54 WRPVSGVLPPLNEADWVREFEKYKQIPEYKEINLGMTLAGFKAIFFWEWLHRILGRVVGM 113
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
A+ +P ++ +R + R+ LV QG +GW+MV SGLE R +D VS
Sbjct: 114 ALVVPFVWYAWRRAIPAGYGWRLFALTALVGLQGAIGWWMVASGLEYR----TD---VSH 166
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRLAAHL R A A + +TG A V A+ F+ +
Sbjct: 167 YRLAAHL----LTALFLLAGLVWTARDLGALARDPGAPPAR-LTGAAIGVIAILFVQLLL 221
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHR 232
GA+VAGL+AG V +S+P M D+++P+ I T +P + F HR
Sbjct: 222 GAWVAGLNAGYVSSSWPLMNDHFVPEGIDWSGGAWLALTNDPFLIHFLHR 271
>UniRef50_A3UCD7 Cluster: Cytochrome oxidase assembly; n=2;
Hyphomonadaceae|Rep: Cytochrome oxidase assembly -
Oceanicaulis alexandrii HTCC2633
Length = 361
Score = 127 bits (307), Expect = 3e-28
Identities = 89/297 (29%), Positives = 131/297 (44%), Gaps = 15/297 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P E W+ E EKY+Q PE++ +N+ ++ ++F++I++ E+ HR GR +G
Sbjct: 52 WRPVTGAIPPLTEAGWEVELEKYRQTPEYQEQNRGMSMAEFQFIYWWEWGHRQLGRTLGL 111
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
F P +F + + R+ V GL QG +GW+MV SGL DR VSQ
Sbjct: 112 VYFAPFMFFLFTRQAPKRLLPRLWVLFGLGGLQGAIGWWMVSSGLVDRLD-------VSQ 164
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRLA HLS A T ++ +I A+ F A+
Sbjct: 165 YRLATHLSMAFLILGLTLWTALELRYGQAQALTRSRLFRPAAIFW-----GAVLFQIAL- 218
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXX 242
GAFVAGLDAG ++N++P +PDD L+ P + E+ VQF HR
Sbjct: 219 GAFVAGLDAGRIFNTWPGFYGQLIPDDYLSGMPFWQAIFESRPAVQFQHRWF-AYILFVG 277
Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
G+ TL+ P +L+ HQAG ++L
Sbjct: 278 GLWLGWRMIRSPAVELKRMGVVVSAALLVQVALGIITLIHVAPLSLSLMHQAGGIIL 334
>UniRef50_Q9A8H9 Cluster: Cytochrome c oxidase assembly protein,
putative; n=2; Caulobacter|Rep: Cytochrome c oxidase
assembly protein, putative - Caulobacter crescentus
(Caulobacter vibrioides)
Length = 343
Score = 126 bits (304), Expect = 8e-28
Identities = 88/310 (28%), Positives = 129/310 (41%), Gaps = 16/310 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ ++G P +E+ W++ FE Y+Q P+F+ N ++T +K I++ E+AHR GR +GA
Sbjct: 46 WQPIMGALPPMSEQAWRESFELYKQIPQFQLVNPDMTLEGYKEIFWWEWAHRLLGRTVGA 105
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
+P F R + + R A GL QGL+GW+MV SGL +R V+
Sbjct: 106 VYAIPLIVFLIRRDIPRRLIWRCAAMLGLGGLQGLVGWWMVSSGLSERV-------SVAP 158
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
RL HL P +++E G A A F ++
Sbjct: 159 ERLMTHLGLALALFVLLIWTALDAWNGSP------RVEERSPWRGWALAFLGAVFFQSLL 212
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLG-XXXXXX 241
GA VAG DAG VYN +P M + P D + + VQF+HR+
Sbjct: 213 GALVAGNDAGFVYNDWPLMNGRFFPGD-YGGAGLWGTLAHSQAAVQFNHRIFAYALLLAA 271
Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLS 301
GV TL+ VP +L HQAG+ VLL+
Sbjct: 272 VVLVVLARRDRLLVGQGKSLATAVAAVVFLQAALGVWTLMAAVPISLGVLHQAGAAVLLA 331
Query: 302 LAVWLTHEVK 311
+A V+
Sbjct: 332 VATAFAWRVR 341
>UniRef50_Q0BQ20 Cluster: Heme O monooxygenase; n=1; Granulibacter
bethesdensis CGDNIH1|Rep: Heme O monooxygenase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 374
Score = 126 bits (303), Expect = 1e-27
Identities = 83/306 (27%), Positives = 128/306 (41%), Gaps = 16/306 (5%)
Query: 6 LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGAAMF 65
L+G PT++ EW++ + YQ+ P++ N FK I+++E+ HR WGR IG +
Sbjct: 70 LMGTLPPTSQTEWERLYALYQKIPQYALVNHGFGLDGFKHIFWLEWTHRLWGRLIGLVLL 129
Query: 66 LPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQYRL 125
LP + + + R+ + L QG +GW+MV SG D VS YRL
Sbjct: 130 LPLIFLAVTRRIERSLIPRLILIFVLGGLQGAVGWFMVASGFF------PDSTAVSPYRL 183
Query: 126 AAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVSGAF 185
HLS P P + + + ++ + IT ++G F
Sbjct: 184 VVHLSFALLLYSALLWTALSVLNPEP-----RPLPGTVGLRRMSAVTLGLVCITIIAGGF 238
Query: 186 VAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXXXXX 245
VAG+ AGL YN+FP M +P+ + + EN TVQFDHR+L
Sbjct: 239 VAGIHAGLDYNTFPLMDGRLVPE---GYGEGHRAMFENIPTVQFDHRLL--ATLTALTAL 293
Query: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSLAVW 305
G+ATLL V +A HQ +++LL+ A+
Sbjct: 294 LTGLIGFRRGGNARRAVLPLMVAVILQYALGIATLLSVVAVPVAVVHQGMAVLLLTAAIV 353
Query: 306 LTHEVK 311
H ++
Sbjct: 354 TLHSLR 359
>UniRef50_A5FXV4 Cluster: Cytochrome oxidase assembly; n=1;
Acidiphilium cryptum JF-5|Rep: Cytochrome oxidase
assembly - Acidiphilium cryptum (strain JF-5)
Length = 367
Score = 125 bits (301), Expect = 2e-27
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 8/312 (2%)
Query: 1 MVTWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
++ W+ + G P W++ F Y+ P++K N+ + + FK I++ E+ HR WGR
Sbjct: 59 IMAWQPVSGVIPPLTHAAWERMFALYKTIPQYKELNRGMDLAGFKAIFWPEWIHRMWGRL 118
Query: 60 IGAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPR 119
+G +P +F + G + ++ + L QGL+GW+MV SG + +
Sbjct: 119 LGFDFGVPLVWFLWTGRIERRLRPWLVTLFVLGGVQGLIGWWMVASGFQ------PGLTE 172
Query: 120 VSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFIT 179
VS +RL+ H +P ++ +A + I
Sbjct: 173 VSVFRLSVHYCFATLLAIAVFATALTVLKPAETRLPPEEAARYAGARRMAMGSIVLISIA 232
Query: 180 AVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXX 239
V+G F++G A + N+FP M W+P D A P KNF N QFDHR+LG
Sbjct: 233 IVAGTFLSGTHAYTIDNTFPLMQGRWVPPDYAALHPFWKNFFLNKAATQFDHRLLGTVAA 292
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVL 299
GV TL+ + + HQ +++L
Sbjct: 293 VGVLAAVVAAIRADLPARARDAFLVMGALLIVQYILGVTTLVSKI-LDIGIVHQLNAVLL 351
Query: 300 LSLAVWLTHEVK 311
L+ AVW E++
Sbjct: 352 LAAAVWAWFELR 363
>UniRef50_Q2GCS4 Cluster: Putative cytochrome oxidase assembly
protein; n=1; Neorickettsia sennetsu str. Miyayama|Rep:
Putative cytochrome oxidase assembly protein -
Neorickettsia sennetsu (strain Miyayama)
Length = 325
Score = 122 bits (295), Expect = 9e-27
Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 21/302 (6%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P ++ WQKEF+KY+ PE+K ++ +I++++F++I+ +E+ HR GR +G
Sbjct: 36 WKPVTGVIPPLSKNAWQKEFDKYKNTPEYKVRHFSISYAEFQFIYLVEYFHRLVGRILGL 95
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
F+ YF+ G L + ++R+ L QG +GWYMVKSGL DVP VS
Sbjct: 96 VFFIGLVYFFVVGNLARESRLRLCFALVLGVIQGFVGWYMVKSGL-------LDVPAVSH 148
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRLA HL F + ++ + G ++ + + +
Sbjct: 149 YRLALHL-------FCASLLFMVLVYEFLSPTVIKGSVFKWHLVGC--SLMFLLSMQIIL 199
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXX 242
G VAGL AGL+ ++FP M + P +I F N +P VQF HR+
Sbjct: 200 GGLVAGLKAGLICSTFPLMNGEFFPAEI--FHELSLNCFNDPVAVQFLHRM--SAFLLTF 255
Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSL 302
GV TLL ++P +A HQ + +LL +
Sbjct: 256 ICLVCLVISFFYDRAFRARVFLVASMMLLQMFFGVLTLLFHIPIDIALLHQIMAFILLGI 315
Query: 303 AV 304
V
Sbjct: 316 CV 317
>UniRef50_A3VUY2 Cluster: Cytochrome oxidase assembly factor; n=1;
Parvularcula bermudensis HTCC2503|Rep: Cytochrome
oxidase assembly factor - Parvularcula bermudensis
HTCC2503
Length = 315
Score = 119 bits (287), Expect = 9e-26
Identities = 86/304 (28%), Positives = 126/304 (41%), Gaps = 15/304 (4%)
Query: 7 LGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGAAMFL 66
+G P +E WQ FEKY+Q PE+ N +T + F+ I++ E+ HR GR IG + L
Sbjct: 1 MGALPPLSEAGWQDLFEKYKQIPEYTLVNAGMTLAQFEEIFWWEWGHRNLGRFIGLYVAL 60
Query: 67 PAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQYRLA 126
P ++ RG + ++ R+ LV QG +GW+MV SGL DR VS +RLA
Sbjct: 61 PLLWWSLRGTVSGPLRWRLWGLFALVGLQGAIGWFMVASGLSDRVD-------VSHFRLA 113
Query: 127 AHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVSGAFV 186
HL+ A + ++ GL+ + F+ + GAFV
Sbjct: 114 LHLATAFLLFGLTLLQALSLWGALQPIAAPRPVR-----VGLS-VLMGGVFLQIIFGAFV 167
Query: 187 AGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXXXXXX 246
AGL AG YN++P M P SP + + VQF+HR+L
Sbjct: 168 AGLRAGKTYNTWPLMDGEVFPRGYFVGSPDFGDTVNSIAAVQFNHRLL--AYVLTGVAIW 225
Query: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSLAVWL 306
G+ T++ VP AL HQ +L L L +
Sbjct: 226 LLVAVWREHSSLRRWSALILAGIVLQMGLGIWTVVMAVPMALGLLHQLAALCLFGLVLTA 285
Query: 307 THEV 310
+ V
Sbjct: 286 WYRV 289
>UniRef50_Q4MZC9 Cluster: Cytochrome c oxidase assembly protein,
putative; n=2; Theileria|Rep: Cytochrome c oxidase
assembly protein, putative - Theileria parva
Length = 435
Score = 118 bits (283), Expect = 3e-25
Identities = 85/320 (26%), Positives = 134/320 (41%), Gaps = 12/320 (3%)
Query: 1 MVTWRLLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAI 60
M+ W G +P N+ +W EF+KY++ PE+K + I+ ++K I+ E+ HR GR
Sbjct: 119 MIDWSFFGLPLPQNDSDWDLEFQKYKKTPEYKGVHYGISLEEYKNIFLKEWLHRMIGRGS 178
Query: 61 GAAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSG-LEDRFHGPSD--- 116
GA L YF ++ L P + + + Q +G +MV+SG E + +
Sbjct: 179 GAFFALGCLYFSFKRCLKPRGYLLLTAIGTIGVYQAFVGKWMVESGFFEPKTENKTPRYR 238
Query: 117 -----VPRVSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHA 171
+ RVS YRL H F ++ K+L + L+ A
Sbjct: 239 VIHLLLFRVSPYRLCFHFFNALAIYSLCFYNSINLL--FGNLRSITPSKDLLRMKWLSGA 296
Query: 172 VKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDH 231
+T +T G FVAG D+GL YN++P M + PD +L+ + + F EN +QF+H
Sbjct: 297 TAFLTLLTMAYGTFVAGNDSGLSYNTWPLMDGKFAPDQVLSIK-SPRQFFENDAVLQFNH 355
Query: 232 RVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAAS 291
R L GV T+L VP A +
Sbjct: 356 RNLAYLTVLSSLVTLVLSKKLNVPRSVSKLSMGVLHASLLQGLIGVLTVLNQVPLHGALA 415
Query: 292 HQAGSLVLLSLAVWLTHEVK 311
H ++VL S+ + L +K
Sbjct: 416 HHFNAVVLWSVILALLRVLK 435
>UniRef50_Q1NBL9 Cluster: Cytochrome oxidase assembly; n=4;
Sphingomonadales|Rep: Cytochrome oxidase assembly -
Sphingomonas sp. SKA58
Length = 374
Score = 113 bits (273), Expect = 4e-24
Identities = 84/306 (27%), Positives = 125/306 (40%), Gaps = 17/306 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P +W + F YQQ PE++ N+ +T S F++I++ E+ HR GR IG
Sbjct: 78 WKPITGAIPPLTHNQWMEAFRLYQQIPEYQEINRGMTLSQFQFIFFWEWVHRLLGRLIGV 137
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
A LP +F ++ M+ R+ L QG +GW+MVKSGL R +D VS
Sbjct: 138 AFALPLLWFAWKRMIPTGYGWRLVALLALGGLQGAIGWWMVKSGLSVR----TD---VSH 190
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRLA HL R + + + A AV + +
Sbjct: 191 YRLAVHL-LTALFIMGGLIWTALDLRVLARRPAARPAR----LRPFALAVLVTLGVQLMF 245
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLGXXXXXXX 242
GAF AGLDAG V +++P M D+ +P I + +P V F HR
Sbjct: 246 GAFTAGLDAGYVSSTWPLMNDHLVPQGINWSGSFWATLSSDPYLVHFIHR----WWAWIA 301
Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSL 302
G+AT++ + LA HQA ++++
Sbjct: 302 AVMLMLLARRAKLARQRGASMALNAAVGTQILLGIATVMTGIALPLAVLHQAVGALVVAA 361
Query: 303 AVWLTH 308
A W H
Sbjct: 362 AAWAAH 367
>UniRef50_Q4FLV1 Cluster: Cytochrome c oxidase assembly protein;
n=2; Candidatus Pelagibacter ubique|Rep: Cytochrome c
oxidase assembly protein - Pelagibacter ubique
Length = 336
Score = 105 bits (252), Expect = 2e-21
Identities = 86/306 (28%), Positives = 131/306 (42%), Gaps = 27/306 (8%)
Query: 1 MVTWRLL-GEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRA 59
+ W L G P N EW F +Y++ PE+K N ++ +FK I+Y E+AHR R
Sbjct: 42 ITAWELFTGILPPMNINEWNFYFTEYKKIPEYKNINYGMSLDEFKVIFYWEYAHRLLARF 101
Query: 60 IGAAMFLPAAYF--WYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDV 117
+G +P +F +++ L K + LV QG +GWYMV SGL + +D
Sbjct: 102 VGLFTLVPLLFFTLYFKKTLHYSNKYYWIFF--LVCLQGFIGWYMVSSGLIEN----ND- 154
Query: 118 PRVSQYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKS-ITGL-AHAVKAM 175
VS +RL+ HLS F + KIK+ ++ I L + +
Sbjct: 155 --VSHFRLSIHLSLALFILCLI----------FWYILDIHKIKKFENKIPNLFLLFILKL 202
Query: 176 TFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLG 235
+ V GAF++GLD GL+YNS+P M ++ P+D+ NP+ +QF HR
Sbjct: 203 IVLQIVLGAFLSGLDGGLIYNSWPDMNGSFFPNDVSYGDLITTQLFNNPSIIQFLHR--- 259
Query: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAG 295
G+ TL+ V A+ HQ G
Sbjct: 260 STAYLLLFFIIILNFIYFKKQYDFKYVLFFDVAILFQIFLGIITLISGVEITYASLHQLG 319
Query: 296 SLVLLS 301
S+++LS
Sbjct: 320 SILVLS 325
>UniRef50_A6EFM9 Cluster: Cytochrome c oxidase assembly protein;
n=1; Pedobacter sp. BAL39|Rep: Cytochrome c oxidase
assembly protein - Pedobacter sp. BAL39
Length = 344
Score = 105 bits (252), Expect = 2e-21
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 13/232 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ LLG P NE EWQ F++Y+Q +F N + T D+K I++ E+ HR W R +G
Sbjct: 42 WKPLLGSIPPLNESEWQASFDRYKQIAQFHLVNSHFTLEDYKSIFFWEWFHRNWARLLGV 101
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
LP YF + + + + L QG++GW MV+SGL D +D+ RV+
Sbjct: 102 IFVLPLTYFLITKQISRTLVFPLIILLSLGLLQGVIGWIMVRSGLND-----TDI-RVNH 155
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
RL+ H F ++K L V I V
Sbjct: 156 IRLSIHFFTALILLCYTLWIAFSLS--FRDIHMRHRVK----YPMLNIIVLGFLCIQMVY 209
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVL 234
GAF+AG +A L ++P M +++P + + + + T + ++QF HR L
Sbjct: 210 GAFMAGTNAALAAITWPDMNGSFIPKAVRSRPVNLTSMTSDLLSIQFIHRNL 261
>UniRef50_Q0BZT0 Cluster: Cytochrome c oxidase assembly protein;
n=1; Hyphomonas neptunium ATCC 15444|Rep: Cytochrome c
oxidase assembly protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 351
Score = 103 bits (248), Expect = 5e-21
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P +E W EFEKY+ +++ N + S+F++I++ E+ HR GR IG
Sbjct: 47 WRPVSGALPPMSEAAWLVEFEKYRATTQYQLTNAGMALSEFQFIYWWEWGHRQIGRLIGL 106
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
A+F +R L + ++ L QG +GW+MV SG+ G ++ V+
Sbjct: 107 VAVAGFAFFAWRRWLGQGLGWKLVGLIALGGLQGAIGWWMVSSGI-----GETERVSVAP 161
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
YRL H + R A A ++ A A+ + F+ +
Sbjct: 162 YRLMTHFTLALLILAVIAWLWLDLGRQQRAGAP-------RAAQRAAMALMGLIFVQMAA 214
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVL 234
GA VAGLDAG Y +P M P + +++F E QF+HR+L
Sbjct: 215 GALVAGLDAGRTYTDWPLMAGEVFPAHYIHAELGVRSFFEGREATQFNHRLL 266
>UniRef50_Q66LN8 Cluster: Heme A synthase; n=26;
Alphaproteobacteria|Rep: Heme A synthase - Rhodobacter
sphaeroides (Rhodopseudomonas sphaeroides)
Length = 391
Score = 99 bits (238), Expect = 7e-20
Identities = 81/316 (25%), Positives = 127/316 (40%), Gaps = 20/316 (6%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
WR + G P NE +W EF+KY+ P+++ N +T ++F+ I++ E+ HR GR IG
Sbjct: 70 WRPVTGAVPPLNETQWAAEFDKYRDSPQYRLMNAGMTLAEFQRIYWWEWGHRQLGRVIGL 129
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVSQ 122
+ F + R+ L QG +GW+MV SGLE D V
Sbjct: 130 VWAVGFLGFLAARRIPRGWWPRLLALGALGGLQGGIGWWMVASGLE------GDKVTVES 183
Query: 123 YRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVS 182
RLA HL R ++ K+ + +T L + + F+ V
Sbjct: 184 TRLATHLGLAFIILGLIAWQALLLGRSESDLLQARRQKDGRLVT-LTTVLIGVAFLQIVL 242
Query: 183 GAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIK----------NFTENPTTVQFDHR 232
GA VAG+DAG + ++P M +LP ++ + P ++ +NP VQF HR
Sbjct: 243 GALVAGIDAGRGFPTWPDMNGTFLPAEMF-YVPGVETDWRNPAWWLGLLQNPGFVQFLHR 301
Query: 233 VLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASH 292
+ G GV T+L +A +H
Sbjct: 302 MAG-YTLAALGLIFWIFGRRSRHRATRGAFDLLAMALLAQILLGVGTVLSAAEWQVAIAH 360
Query: 293 QAGSLVLLSLAVWLTH 308
Q G++V+ L + H
Sbjct: 361 QVGAVVIWVLILHARH 376
>UniRef50_A5FXV3 Cluster: Cytochrome oxidase assembly; n=1;
Acidiphilium cryptum JF-5|Rep: Cytochrome oxidase
assembly - Acidiphilium cryptum (strain JF-5)
Length = 358
Score = 96.3 bits (229), Expect = 9e-19
Identities = 66/232 (28%), Positives = 92/232 (39%), Gaps = 12/232 (5%)
Query: 3 TWR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIG 61
TW+ G P W++ F Y+ +++ +T + F+ ++ F R WGR +
Sbjct: 44 TWQPFTGIVPPLTHAAWERAFGLYKATAQYQAMQPKMTLAQFQSLYLPMFLDRDWGRLMA 103
Query: 62 AAMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVS 121
+P A F RG + + + GL A + MGWYM G+ R PS +
Sbjct: 104 VVFLVPLAVFRLRGRISNRLTAWLLFLFGLGAGEATMGWYMTYEGMTSRILQPSPL---- 159
Query: 122 QYRLAAHLSXXXXXXXXXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAV 181
L H P PA + L + GL + T
Sbjct: 160 --YLGPHFVLAMLIFTAMLWTALTLRNPEPAI-----LPGLARLRGLLSVSIGLIIATIG 212
Query: 182 SGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRV 233
GA VA A VYN+FP M + LP LA P NF N TVQF+HRV
Sbjct: 213 LGALVAASGALKVYNTFPLMDGHALPPHALAMHPLWLNFLANKATVQFEHRV 264
>UniRef50_Q4P0H1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 653
Score = 94.7 bits (225), Expect = 3e-18
Identities = 44/114 (38%), Positives = 65/114 (57%)
Query: 8 GEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGAAMFLP 67
G ++P EWQ E++KY+Q PEF N ++ DFK I+ E+ HR GR IG A LP
Sbjct: 200 GMRLPMTTPEWQAEWDKYKQTPEFLLLNSKMSLDDFKSIYMWEWGHRVLGRVIGVAFVLP 259
Query: 68 AAYFWYRGMLLPDMKIRVAVYCGLVAAQGLMGWYMVKSGLEDRFHGPSDVPRVS 121
AA+F R + + ++ + QG +GW+MV+SGL G SD P+++
Sbjct: 260 AAFFVTRRWVAAGTRWKLLAIAAGIGFQGFLGWFMVESGLTAPQAGNSDKPKMA 313
Score = 62.9 bits (146), Expect = 1e-08
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Query: 162 LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGD-------NWLPDDILA-- 212
L+S + L V + F TA+SGA VAGLDAGLVYN FP MGD + L DD A
Sbjct: 430 LRSHSRLTKLVAGLVFTTAMSGALVAGLDAGLVYNEFPTMGDGRIAPPMHELIDDRFAQR 489
Query: 213 ---FSPTIKNFTENPTTVQFDHRVL 234
+N T+NP TVQ HR L
Sbjct: 490 ADRSDKVWRNLTQNPVTVQLIHRTL 514
Score = 37.1 bits (82), Expect = 0.60
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 276 GVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKLLKYIP 317
G+ TL+ VP LA++HQAGSL LLS+ L + L+ IP
Sbjct: 580 GITTLIYLVPIPLASAHQAGSLALLSV---LLASISALRPIP 618
>UniRef50_A3K259 Cluster: Cytochrome oxidase assembly; n=1;
Sagittula stellata E-37|Rep: Cytochrome oxidase assembly
- Sagittula stellata E-37
Length = 438
Score = 79.4 bits (187), Expect = 1e-13
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 79 PDMKIRVAVYCGLVAA-QGLMGWYMVKSGLEDRFHGPSDVPRVSQYRLAAHLSXXXXXXX 137
PD R+ ++ GL+ A QG +GW+MV SGL + V+ YRLA HL
Sbjct: 203 PDWIPRL-LFIGLLGALQGAVGWWMVHSGLS------GERLDVASYRLATHLGVAFVILG 255
Query: 138 XXXXXXXXXXRPFPAAATLQKIKELKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNS 197
RP +++ E K + G+ + F+ + GA VAG+DAG + S
Sbjct: 256 YIAWYTYALARPERDLIQARRLGEAK-LFGMTTGLLHFAFLQILLGALVAGIDAGRNFPS 314
Query: 198 FPKMGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVLG 235
+P M P D+ +P +NF ENP VQF HR+ G
Sbjct: 315 WPLMEGGLWPSDMFVETPVWRNFFENPGLVQFMHRMAG 352
Score = 59.7 bits (138), Expect = 1e-07
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 4 WR-LLGEKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFAHRTWGRAIGA 62
W+ + G P +E W EF+KY+Q PE++ +N+ ++ S+FK I++ E+ HR GR IG
Sbjct: 69 WKPVTGALPPMSETAWTAEFDKYRQIPEYQLQNKGMSMSEFKAIYWWEWGHRQLGRVIGL 128
Query: 63 AMFLPAAYFWYRGMLLPDMKIRVAVYCGLVAAQGL 97
L F G +P + G +AA G+
Sbjct: 129 VWALGFFGFLLAGR-MPRGTSGIGPLYGGIAALGI 162
>UniRef50_Q5DHU8 Cluster: SJCHGC09297 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09297 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 70.5 bits (165), Expect = 5e-11
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 201 MGDNWLPDDILA--FSPTIKNFTENPTTVQFDHRVLGXXXXXXXX---XXXXXXXXXXXX 255
M D W+PDD++ + T+KNF +NPT VQF HR+L
Sbjct: 1 MADRWIPDDLIVSRYGSTVKNFLDNPTAVQFTHRMLAYTTVLTTGLLWIKVMRLGVTCTG 60
Query: 256 XXXXXXXXXXXXXXXXXXXXGVATLLCYVPTALAASHQAGSLVLLSLAVWLTH 308
G+ TLL YVP +L + HQ G ++LLS +W TH
Sbjct: 61 PRIRNAAHLVLGAAFGQSLLGITTLLYYVPVSLGSLHQCGGVILLSSLLWFTH 113
>UniRef50_UPI0000E2263C Cluster: PREDICTED: similar to Cox15
protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
Cox15 protein - Pan troglodytes
Length = 168
Score = 56.4 bits (130), Expect = 9e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 201 MGDNWLPDDILAFSPTIKNFTENPTTVQFDHRVL 234
MG++W+P+D+ FSP ++N ENPT VQFDHR+L
Sbjct: 1 MGESWIPEDLFTFSPILRNVFENPTMVQFDHRIL 34
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Query: 276 GVATLLCYVPTALAASHQAGSLVLLSLAVWLTHEVKLLKYIPK 318
G++TLL YVPT LAA+HQ+GSL LL+ A+WL +E L+ +PK
Sbjct: 129 GISTLLMYVPTPLAATHQSGSLALLTGALWLMNE---LRRVPK 168
>UniRef50_P00692 Cluster: Alpha-amylase precursor; n=52;
Bacteria|Rep: Alpha-amylase precursor - Bacillus
amyloliquefaciens
Length = 514
Score = 35.5 bits (78), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 9 EKMPTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWY 48
E P N + E + + + +F++ + T+SDFKW WY
Sbjct: 148 EVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWY 187
>UniRef50_A3JBB5 Cluster: Cytochrome oxidase assembly protein; n=19;
Gammaproteobacteria|Rep: Cytochrome oxidase assembly
protein - Marinobacter sp. ELB17
Length = 378
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 276 GVATLLCYVPTALAASHQA-GSLVLLSLAVWLTHEVKLLKYIP 317
G+A ++ Y+P A+A +H A G+L+LLS+ + H+ +L + +P
Sbjct: 315 GLANVILYIPLAVAVAHNATGALLLLSVIQLIWHQRQLSQGLP 357
>UniRef50_Q7QTD5 Cluster: GLP_9_6596_9676; n=1; Giardia lamblia ATCC
50803|Rep: GLP_9_6596_9676 - Giardia lamblia ATCC 50803
Length = 1026
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 163 KSITGLAHAVKAMTFITAVSGA----FVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIK 218
KS+T L ++A+ + T G V D+ L Y P +G N + I A SP
Sbjct: 274 KSLTTLGRVIEALAYNTTAEGRRKPQHVPYRDSQLTYLLQPALGGNSMTCMIAAISPAST 333
Query: 219 NFTENPTTVQFDHR 232
N+ E+ +T+++ R
Sbjct: 334 NYDESLSTLRYADR 347
>UniRef50_A5GCT2 Cluster: Cytochrome oxidase assembly precursor;
n=1; Geobacter uraniumreducens Rf4|Rep: Cytochrome
oxidase assembly precursor - Geobacter uraniumreducens
Rf4
Length = 286
Score = 33.9 bits (74), Expect = 5.6
Identities = 33/145 (22%), Positives = 46/145 (31%), Gaps = 11/145 (7%)
Query: 162 LKSITGLAHAVKAMTFITAVSGAFVAGLDAGLVYNSFPKMGDNWLPDDILAFSPTIKNFT 221
LK L + A+ F A GA+V AGL FP +WLP P +
Sbjct: 141 LKGYALLFFGLGALIFSQAALGAYVRHAQAGLACPDFPTCLGHWLP-------PLL---- 189
Query: 222 ENPTTVQFDHRVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVATLL 281
+ P + F HR+L G +
Sbjct: 190 DGPMRIHFSHRLLAYLILITTAILYIAALMDERLRRQRKPALFLVITGILQIGVGAGVVQ 249
Query: 282 CYVPTALAASHQAGSLVLLSLAVWL 306
+ A A H A +L +LS VW+
Sbjct: 250 SGLNFAATALHLAVALAMLSALVWM 274
>UniRef50_Q8DT08 Cluster: Intracellular alpha-amylase; n=14;
Streptococcus|Rep: Intracellular alpha-amylase -
Streptococcus mutans
Length = 486
Score = 33.5 bits (73), Expect = 7.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 12 PTNEEEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWY 48
P+N +E E + + + +F + + +SDFKW WY
Sbjct: 121 PSNRQEKISEPYEIEGWTQFNFPGRQDNYSDFKWHWY 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.324 0.136 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,496,639
Number of Sequences: 1657284
Number of extensions: 10544641
Number of successful extensions: 34185
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 33949
Number of HSP's gapped (non-prelim): 112
length of query: 318
length of database: 575,637,011
effective HSP length: 101
effective length of query: 217
effective length of database: 408,251,327
effective search space: 88590537959
effective search space used: 88590537959
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 72 (33.1 bits)
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