GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001307-TA|BGIBMGA001307-PA|IPR001424|Superoxide
dismutase, copper/zinc binding
         (154 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   175   5e-46
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.          108   9e-26
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.          100   4e-23
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   2.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   5.7  
DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.        22   7.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   7.6  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  175 bits (426), Expect = 5e-46
 Identities = 82/152 (53%), Positives = 103/152 (67%), Gaps = 3/152 (1%)

Query: 2   PAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
           P KA+  L+G   VSG V   Q     PV +   V GLT GKHGFH+HE GD T+GC S 
Sbjct: 20  PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79

Query: 60  GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVV 119
           G H+NP+K  HG P+  VRHVGDLGNI A +++G+ K S  D+ +SL+G  S+IGR +V+
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNI-AADENGIAKTSYSDTVVSLYGARSVIGRAIVI 138

Query: 120 HADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151
           HA+ DDLG   H  S  TGNAGGR+ACGVIG+
Sbjct: 139 HAEVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score =  108 bits (259), Expect = 9e-26
 Identities = 49/76 (64%), Positives = 63/76 (82%), Gaps = 1/76 (1%)

Query: 79  HVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTG 138
           H GD+GNI A +++G  KV +  +QI+L G  +++GR+LVVHADPDDLG+GGHELSKTTG
Sbjct: 1   HAGDMGNIVA-DENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTG 59

Query: 139 NAGGRIACGVIGLAKI 154
           +AG R+ACGVIGL KI
Sbjct: 60  DAGARLACGVIGLCKI 75


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 99.5 bits (237), Expect = 4e-23
 Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 63  FNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHAD 122
           +NP+  DHG P  A  HVGDLGNI A   +G+ K+ I + +++L G  SIIGRTL +   
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYS-TGLAKIQIANKKLTLVGDRSIIGRTLSISEY 59

Query: 123 PDDLGLGGHELSKTTGNAGGRIACGVIGLAK 153
            DDLG G H+ SKTTGN+G  IAC +IG+A+
Sbjct: 60  EDDLGRGKHDYSKTTGNSGNCIACAIIGVAR 90


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 88  AIEDSGVTK-VSIQDSQISLHGPNSIIGRTLVVHADPD 124
           AI +  VTK   I D+ ++LH    I+     +H DPD
Sbjct: 382 AILERIVTKPYRIPDTSVTLHPGMKIMIPAYAIHHDPD 419


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)

Query: 50  GDNTNGCTSAG 60
           G  TNGCT AG
Sbjct: 190 GGGTNGCTKAG 200


>DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.
          Length = 93

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 20 DQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGA 61
          D++  + P+V   ++  + +G     + E  ++ N   +AG+
Sbjct: 34 DEEHYRKPMVFLDQLLHMQRGGRDLEIQEIENHLNNIIAAGS 75


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 69  DHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNS 111
           + G P+ A    GD  +I+ +ED  V + S   SQ +L  P +
Sbjct: 15  EEGAPTGAGPGTGDRASIQRLEDEMVQERSF--SQRALPVPRT 55


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,925
Number of Sequences: 2123
Number of extensions: 7438
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 7
length of query: 154
length of database: 516,269
effective HSP length: 59
effective length of query: 95
effective length of database: 391,012
effective search space: 37146140
effective search space used: 37146140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)