Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001307-TA|BGIBMGA001307-PA|IPR001424|Superoxide
dismutase, copper/zinc binding
(154 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 190 4e-49
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 190 4e-49
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 190 4e-49
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 190 4e-49
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 175 2e-44
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 162 9e-41
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 161 2e-40
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 161 2e-40
Z81110-3|CAB03260.1| 949|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 29 1.1
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 3.4
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 3.4
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 3.4
Z27079-3|CAA81590.1| 332|Caenorhabditis elegans Hypothetical pr... 27 5.9
X68384-1|CAA48455.1| 332|Caenorhabditis elegans protein ( C.ele... 27 5.9
S75262-1|AAC60520.1| 332|Caenorhabditis elegans p34cdc2 kinase ... 27 5.9
AF129109-1|AAD37119.1| 332|Caenorhabditis elegans CDK1 ortholog... 27 5.9
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 27 7.8
AL032635-5|CAB63375.1| 260|Caenorhabditis elegans Hypothetical ... 27 7.8
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 190 bits (463), Expect = 4e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 5/156 (3%)
Query: 1 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
M +AV VLRG+ V+GT++ Q+ E V+ GE++GLT G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVV 119
G HFNP + HGGP S +RHVGDLGN+EA D GV K+ + D+ ++L+GPN+++GR++VV
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 119
Query: 120 HADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 152
HA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 120 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 190 bits (463), Expect = 4e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 5/156 (3%)
Query: 1 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
M +AV VLRG+ V+GT++ Q+ E V+ GE++GLT G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVV 119
G HFNP + HGGP S +RHVGDLGN+EA D GV K+ + D+ ++L+GPN+++GR++VV
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 119
Query: 120 HADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 152
HA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 120 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 190 bits (463), Expect = 4e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 5/156 (3%)
Query: 1 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
M +AV VLRG+ V+GT++ Q+ E V+ GE++GLT G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVV 119
G HFNP + HGGP S +RHVGDLGN+EA D GV K+ + D+ ++L+GPN+++GR++VV
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 119
Query: 120 HADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 152
HA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 120 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 190 bits (463), Expect = 4e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 5/156 (3%)
Query: 1 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSA 59
M +AV VLRG+ V+GT++ Q+ E V+ GE++GLT G HGFHVH++GD+TNGC SA
Sbjct: 23 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 82
Query: 60 GAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVV 119
G HFNP + HGGP S +RHVGDLGN+EA D GV K+ + D+ ++L+GPN+++GR++VV
Sbjct: 83 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 141
Query: 120 HADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 152
HA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 142 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 177
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 175 bits (425), Expect = 2e-44
Identities = 87/153 (56%), Positives = 106/153 (69%), Gaps = 5/153 (3%)
Query: 4 KAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAH 62
+AV VLRG V GTV+ Q+ E GE++GL+ G HGFH+H++GD+T+GCTSAG H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 63 FNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHAD 122
FNP K +HGG S VRHVGDLGN+EA D GV K+ D +SL G N++IGR++VVH D
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGAD-GVAKIKFSDKVVSLFGANTVIGRSMVVHVD 142
Query: 123 PDDLGLG---GHELSKTTGNAGGRIACGVIGLA 152
DDLG G E S TGNAG R ACGVI LA
Sbjct: 143 RDDLGQGIDDKAEESLKTGNAGARAACGVIALA 175
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 162 bits (394), Expect = 9e-41
Identities = 77/142 (54%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Query: 12 DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHG 71
++ GT+ FDQ S + ++G V GL GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQSG--SFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 72 GPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGH 131
P + RH+GDLGNIE+ SG T +S+ DS SL G SIIGR++V+H DDLG G
Sbjct: 97 APDDSNRHIGDLGNIES-PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTS 155
Query: 132 ELSKTTGNAGGRIACGVIGLAK 153
+ SKTTGNAG R+ACG IG+ +
Sbjct: 156 DQSKTTGNAGSRLACGTIGIVE 177
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 161 bits (391), Expect = 2e-40
Identities = 77/139 (55%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 12 DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHG 71
++ GT+ FDQ S + ++G V GL GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQSG--SFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 72 GPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGH 131
P + RH+GDLGNIE+ SG T +S+ DS SL G SIIGR++V+H DDLG G
Sbjct: 97 APDDSNRHIGDLGNIES-PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTS 155
Query: 132 ELSKTTGNAGGRIACGVIG 150
+ SKTTGNAG R+ACG IG
Sbjct: 156 DQSKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 161 bits (391), Expect = 2e-40
Identities = 77/139 (55%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 12 DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHG 71
++ GT+ FDQ S + ++G V GL GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQSG--SFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 72 GPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGH 131
P + RH+GDLGNIE+ SG T +S+ DS SL G SIIGR++V+H DDLG G
Sbjct: 97 APDDSNRHIGDLGNIES-PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTS 155
Query: 132 ELSKTTGNAGGRIACGVIG 150
+ SKTTGNAG R+ACG IG
Sbjct: 156 DQSKTTGNAGSRLACGTIG 174
>Z81110-3|CAB03260.1| 949|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 949
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 AKAVCVLRGDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAH 62
A A+ + R F Q + + + GEV L G+H +H+FGD++ GC+ GA
Sbjct: 822 AVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAP 881
Query: 63 FN 64
F+
Sbjct: 882 FS 883
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 3 AKAVCVLRGDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAH 62
A A+ + R F Q + + + GEV L G+H +H+FGD++ GC+ GA
Sbjct: 675 AVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAP 734
Query: 63 FN 64
F+
Sbjct: 735 FS 736
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 62 HFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQ-DSQISLHGPNSIIGRTL 117
+F P ++D S+V DL E D G+T++S++ D + +H P + TL
Sbjct: 398 NFAPHREDDRQSVSSVSTASDLSEKENGTDIGITRISVKSDGRAEIHSPKRPVRVTL 454
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 58 SAGAHFNPEKQDH--GGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISL 106
+A H PEK++ GG A H DL A+ D GV ++S+ I +
Sbjct: 481 AAAYHIIPEKKNERIGGQMMASSHTYDLSKKHAVRDDGV-QISLDPESIDM 530
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 484 LITHVKPEDLDVLASELSKMGGHHNGR 510
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 494 LITHVKPEDLDVLASELSKMGGHHNGR 520
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 131 LITHVKPEDLDVLASELSKMGGHHNGR 157
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 204 LITHVKPEDLDVLASELSKMGGHHNGR 230
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 117 LVVHADPDDLGLGGHELSKTTGNAGGR 143
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>Z27079-3|CAA81590.1| 332|Caenorhabditis elegans Hypothetical
protein T05G5.3 protein.
Length = 332
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 66 EKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISL 106
E +D G PS+AVR + L ++ G+ V +Q++++ L
Sbjct: 56 ESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFL 96
>X68384-1|CAA48455.1| 332|Caenorhabditis elegans protein (
C.elegans mRNA for p34cdc2 homologue. ).
Length = 332
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 66 EKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISL 106
E +D G PS+AVR + L ++ G+ V +Q++++ L
Sbjct: 56 ESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFL 96
>S75262-1|AAC60520.1| 332|Caenorhabditis elegans p34cdc2 kinase
protein.
Length = 332
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 66 EKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISL 106
E +D G PS+AVR + L ++ G+ V +Q++++ L
Sbjct: 56 ESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFL 96
>AF129109-1|AAD37119.1| 332|Caenorhabditis elegans CDK1 ortholog
protein.
Length = 332
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 66 EKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISL 106
E +D G PS+AVR + L ++ G+ V +Q++++ L
Sbjct: 56 ESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLFL 96
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 73 PSSAVRHVGDLG-NIEAIEDSGVTKVSIQDSQISLHGPNSII 113
PS V + DLG N+++ ++ G+T + + SQ ++H +I+
Sbjct: 170 PSDCV-FLDDLGSNLKSAKEMGITTIKVVSSQQAIHDLGNIL 210
>AL032635-5|CAB63375.1| 260|Caenorhabditis elegans Hypothetical
protein Y51A2A.7 protein.
Length = 260
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 28 VVVSGEVQG--LTKGKHGFHVHEFGDNTNGCTSAGA 61
V+ G ++G L KG HG F NTN T+A A
Sbjct: 91 VINDGVLEGGVLNKGHHGTDYISFYGNTNRATAAAA 126
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,138,135
Number of Sequences: 27539
Number of extensions: 176247
Number of successful extensions: 248
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 211
Number of HSP's gapped (non-prelim): 27
length of query: 154
length of database: 12,573,161
effective HSP length: 76
effective length of query: 78
effective length of database: 10,480,197
effective search space: 817455366
effective search space used: 817455366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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