Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001305-TA|BGIBMGA001305-PA|undefined
         (95 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538169-1|CAD98046.1|  914|Homo sapiens hypothetical protein pr...    75   3e-14
BC117177-1|AAI17178.1|  914|Homo sapiens transmembrane and tetra...    75   3e-14
BC117175-1|AAI17176.1|  914|Homo sapiens transmembrane and tetra...    75   3e-14
AJ697717-1|CAG26973.1|  914|Homo sapiens SMILE protein protein.        75   3e-14
AL359085-5|CAI11007.1|  760|Homo sapiens transmembrane and tetra...    70   1e-12
AL359085-3|CAI11005.1|  225|Homo sapiens transmembrane and tetra...    70   1e-12
BC093854-1|AAH93854.1|  836|Homo sapiens transmembrane and tetra...    67   7e-12
BC093852-1|AAH93852.1|  836|Homo sapiens transmembrane and tetra...    67   7e-12
AL359085-2|CAI11004.1|  684|Homo sapiens transmembrane and tetra...    45   3e-05
AK074973-1|BAC11325.1|  815|Homo sapiens BUNIT (EC 2.4.1.-).  pr...    33   0.19 
AL359085-4|CAI11006.1|   54|Homo sapiens transmembrane and tetra...    29   1.8  

>BX538169-1|CAD98046.1|  914|Homo sapiens hypothetical protein
          protein.
          Length = 914

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 33/69 (47%), Positives = 45/69 (65%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSY 86
          ++       Y NSL   FV DD+ A++ N D+  +  LK LF +DFWG+PM++  SHKSY
Sbjct: 11 LIVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSY 70

Query: 87 RPLTTLSFR 95
          RPLT L+FR
Sbjct: 71 RPLTVLTFR 79


>BC117177-1|AAI17178.1|  914|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 3 protein.
          Length = 914

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 33/69 (47%), Positives = 45/69 (65%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSY 86
          ++       Y NSL   FV DD+ A++ N D+  +  LK LF +DFWG+PM++  SHKSY
Sbjct: 11 LIVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSY 70

Query: 87 RPLTTLSFR 95
          RPLT L+FR
Sbjct: 71 RPLTVLTFR 79


>BC117175-1|AAI17176.1|  914|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 3 protein.
          Length = 914

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 33/69 (47%), Positives = 45/69 (65%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSY 86
          ++       Y NSL   FV DD+ A++ N D+  +  LK LF +DFWG+PM++  SHKSY
Sbjct: 11 LIVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSY 70

Query: 87 RPLTTLSFR 95
          RPLT L+FR
Sbjct: 71 RPLTVLTFR 79


>AJ697717-1|CAG26973.1|  914|Homo sapiens SMILE protein protein.
          Length = 914

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 33/69 (47%), Positives = 45/69 (65%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSY 86
          ++       Y NSL   FV DD+ A++ N D+  +  LK LF +DFWG+PM++  SHKSY
Sbjct: 11 LIVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSY 70

Query: 87 RPLTTLSFR 95
          RPLT L+FR
Sbjct: 71 RPLTVLTFR 79


>AL359085-5|CAI11007.1|  760|Homo sapiens transmembrane and
           tetratricopeptide repeat containing 4 protein.
          Length = 760

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query: 27  MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSY 86
           +V + A++ +  S  GDFV DD  A+V N D+     L  L+  DFWGS ++   SHKSY
Sbjct: 44  VVGSVAIVCFARSYDGDFVFDDSEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSY 103

Query: 87  RPLTTLSFR 95
           RPLT L+FR
Sbjct: 104 RPLTVLTFR 112


>AL359085-3|CAI11005.1|  225|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 4 protein.
          Length = 225

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSY 86
          +V + A++ +  S  GDFV DD  A+V N D+     L  L+  DFWGS ++   SHKSY
Sbjct: 25 VVGSVAIVCFARSYDGDFVFDDSEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSY 84

Query: 87 RPLTTLSFR 95
          RPLT L+FR
Sbjct: 85 RPLTVLTFR 93


>BC093854-1|AAH93854.1|  836|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 2 protein.
          Length = 836

 Score = 67.3 bits (157), Expect = 7e-12
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query: 29 TATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSYRP 88
          +A  +  Y+N+L  DF +DD  A+ TN D++       +F +DFWG+ +    SHKSYRP
Sbjct: 8  SALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRP 67

Query: 89 LTTLSFR 95
          L TLSFR
Sbjct: 68 LCTLSFR 74


>BC093852-1|AAH93852.1|  836|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 2 protein.
          Length = 836

 Score = 67.3 bits (157), Expect = 7e-12
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query: 29 TATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNSHKSYRP 88
          +A  +  Y+N+L  DF +DD  A+ TN D++       +F +DFWG+ +    SHKSYRP
Sbjct: 8  SALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRP 67

Query: 89 LTTLSFR 95
          L TLSFR
Sbjct: 68 LCTLSFR 74


>AL359085-2|CAI11004.1|  684|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 4 protein.
          Length = 684

 Score = 45.2 bits (102), Expect = 3e-05
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTNGDVVGTNSLKQLFLDDFWGSPMADVNS 82
          +V + A++ +  S  GDFV DD  A+V N D+     L  L+  DFWGS ++   S
Sbjct: 25 VVGSVAIVCFARSYDGDFVFDDSEAIVNNKDLQAETPLGDLWHHDFWGSRLSRYTS 80


>AK074973-1|BAC11325.1|  815|Homo sapiens BUNIT (EC 2.4.1.-).
          protein.
          Length = 815

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 13/19 (68%), Positives = 16/19 (84%)

Query: 77 MADVNSHKSYRPLTTLSFR 95
          M++  SHKSYRPLT L+FR
Sbjct: 1  MSEERSHKSYRPLTVLTFR 19


>AL359085-4|CAI11006.1|   54|Homo sapiens transmembrane and
          tetratricopeptide repeat containing 4 protein.
          Length = 54

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 27 MVTATAVLSYVNSLHGDFVHDDIPAVVTN 55
          +V + A++ +  S  GDFV DD  A+V N
Sbjct: 25 VVGSVAIVCFARSYDGDFVFDDSEAIVNN 53


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.132    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,128,821
Number of Sequences: 224733
Number of extensions: 441859
Number of successful extensions: 790
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 779
Number of HSP's gapped (non-prelim): 11
length of query: 95
length of database: 73,234,838
effective HSP length: 72
effective length of query: 23
effective length of database: 57,054,062
effective search space: 1312243426
effective search space used: 1312243426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)