GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001305-TA|BGIBMGA001305-PA|undefined
         (95 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   2.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   3.9  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   3.9  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   3.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    19   6.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   8.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    19   8.9  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 12  EHPPKKSRSDLAIYAMVTATAVLSY-----VNSLHGDFVHDDIPAVVTNGDVV 59
           E+P  K+  +  +  +  A A   Y     VNS+ G+    DIPA+    D++
Sbjct: 145 EYPQDKATFNRLLQGLKDAFAPKGYLLTVAVNSIPGEVGGYDIPAMSNVLDII 197


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 36  YVNSLHGDFVHDDIPAVVTNGD 57
           Y   + G+F+ D+  A++ +GD
Sbjct: 274 YAPVVDGEFLTDEPIAIIKSGD 295


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 36  YVNSLHGDFVHDDIPAVVTNGD 57
           Y   + G+F+ D+  A++ +GD
Sbjct: 274 YAPVVDGEFLTDEPIAIIKSGD 295


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 36  YVNSLHGDFVHDDIPAVVTNGD 57
           Y   + G+F+ D+  A++ +GD
Sbjct: 276 YAPVVDGEFLTDEPIAIIKSGD 297


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 59  VGTNSLKQLFLDDFWGSPMADVNSHKSYRPLTTLS 93
           V T S+   F+ + W      VN  +SY  + T S
Sbjct: 109 VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 143


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory
          receptor candidate 16 protein.
          Length = 452

 Score = 19.0 bits (37), Expect = 8.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 77 MADVNSHKSYRPLTTLS 93
          M  V  HK Y P+  LS
Sbjct: 1  MPQVKLHKHYVPIILLS 17


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.0 bits (37), Expect = 8.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 36  YVNSLHGDFVHDDIPAVVTNGD 57
           Y   + G+F+ D+  A + +GD
Sbjct: 276 YAPVVDGEFLTDEPIATIKSGD 297


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.132    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,402
Number of Sequences: 317
Number of extensions: 839
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 95
length of database: 114,650
effective HSP length: 48
effective length of query: 47
effective length of database: 99,434
effective search space:  4673398
effective search space used:  4673398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
S2: 37 (19.0 bits)