Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001304-TA|BGIBMGA001304-PA|undefined
         (114 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   2.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   2.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   2.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   2.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   2.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   9.3  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4   NGLFDKHLLIDYRESYLGNVNTSPDTFCNLTNG 36
           NGL D+ L + + + Y+ +   +PD+     +G
Sbjct: 167 NGLKDQILALKFIKKYIQHFGGTPDSITLFGDG 199


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4   NGLFDKHLLIDYRESYLGNVNTSPDTFCNLTNG 36
           NGL D+ L + + + Y+ +   +PD+     +G
Sbjct: 167 NGLKDQILALKFIKKYIQHFGGTPDSITLFGDG 199


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4   NGLFDKHLLIDYRESYLGNVNTSPDTFCNLTNG 36
           NGL D+ L + + + Y+ +   +PD+     +G
Sbjct: 167 NGLKDQILALKFIKKYIQHFGGTPDSITLFGDG 199


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4   NGLFDKHLLIDYRESYLGNVNTSPDTFCNLTNG 36
           NGL D+ L + + + Y+ +   +PD+     +G
Sbjct: 167 NGLKDQILALKFIKKYIQHFGGTPDSITLFGDG 199


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4   NGLFDKHLLIDYRESYLGNVNTSPDTFCNLTNG 36
           NGL D+ L + + + Y+ +   +PD+     +G
Sbjct: 167 NGLKDQILALKFIKKYIQHFGGTPDSITLFGDG 199


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 9.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query: 26  SPDTFCNLTN 35
           SPD FCN  N
Sbjct: 548 SPDQFCNGDN 557


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,594
Number of Sequences: 317
Number of extensions: 1055
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 114
length of database: 114,650
effective HSP length: 49
effective length of query: 65
effective length of database: 99,117
effective search space:  6442605
effective search space used:  6442605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)