Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001304-TA|BGIBMGA001304-PA|undefined
         (114 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042600-1|AAH42600.1|  507|Homo sapiens solute carrier family 7...    28   7.7  
BC039692-1|AAH39692.1|  507|Homo sapiens solute carrier family 7...    28   7.7  
AF104032-1|AAD20464.1|  507|Homo sapiens L-type amino acid trans...    28   7.7  
AF077866-1|AAC61479.1|  507|Homo sapiens amino acid transporter ...    28   7.7  
AB023721-1|BAB70708.1|  507|Homo sapiens sodium-independent neut...    28   7.7  
AB018542-1|BAA33851.1|  507|Homo sapiens CD98 light chain protein.     28   7.7  
AB018009-1|BAA84648.1|  507|Homo sapiens L-type amino acid trans...    28   7.7  
AB017908-1|BAA75746.1|  507|Homo sapiens 4F2 light chain protein.      28   7.7  

>BC042600-1|AAH42600.1|  507|Homo sapiens solute carrier family 7
           (cationic amino acid transporter, y+ system), member 5
           protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>BC039692-1|AAH39692.1|  507|Homo sapiens solute carrier family 7
           (cationic amino acid transporter, y+ system), member 5
           protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>AF104032-1|AAD20464.1|  507|Homo sapiens L-type amino acid
           transporter subunit LAT1 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>AF077866-1|AAC61479.1|  507|Homo sapiens amino acid transporter E16
           protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>AB023721-1|BAB70708.1|  507|Homo sapiens sodium-independent neutral
           amino acid transporter LAT1 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>AB018542-1|BAA33851.1|  507|Homo sapiens CD98 light chain protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>AB018009-1|BAA84648.1|  507|Homo sapiens L-type amino acid
           transporter 1 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


>AB017908-1|BAA75746.1|  507|Homo sapiens 4F2 light chain protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F G  L++ + V     G F    WN+  FVT+  +N
Sbjct: 233 FEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMIN 269


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,615,315
Number of Sequences: 224733
Number of extensions: 598218
Number of successful extensions: 849
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 841
Number of HSP's gapped (non-prelim): 8
length of query: 114
length of database: 73,234,838
effective HSP length: 80
effective length of query: 34
effective length of database: 55,256,198
effective search space: 1878710732
effective search space used: 1878710732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)