GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001304-TA|BGIBMGA001304-PA|undefined
         (114 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LQT4 Cluster: Predicted protein; n=1; Pichia stipitis...    32   2.0  
UniRef50_Q0VNE5 Cluster: Putative uncharacterized protein; n=1; ...    31   3.6  
UniRef50_UPI0000F2B9B9 Cluster: PREDICTED: similar to tMDC III; ...    31   4.7  
UniRef50_Q8II70 Cluster: Putative uncharacterized protein; n=1; ...    31   6.2  
UniRef50_Q559C0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.2  
UniRef50_Q83516 Cluster: Fusion glycoprotein F0; n=3; Paramyxovi...    30   8.3  
UniRef50_Q54RW9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.3  
UniRef50_Q6CC37 Cluster: Yarrowia lipolytica chromosome C of str...    30   8.3  

>UniRef50_A3LQT4 Cluster: Predicted protein; n=1; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 343

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 52  LRSKYAVKFTGL-CLEIIDAVQVKLGGYFTK 81
           L  K+++KFTGL C  I+D  Q   G +FTK
Sbjct: 140 LHGKFSIKFTGLICPTIVDIAQSDNGQFFTK 170


>UniRef50_Q0VNE5 Cluster: Putative uncharacterized protein; n=1;
           Alcanivorax borkumensis SK2|Rep: Putative
           uncharacterized protein - Alcanivorax borkumensis
           (strain SK2 / ATCC 700651 / DSM 11573)
          Length = 686

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 60  FTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVN 96
           F  L L+++D V V LGGY+ ++  +   F    GVN
Sbjct: 408 FGNLALDVLDPVTVNLGGYWERDQISDDHFSPRAGVN 444


>UniRef50_UPI0000F2B9B9 Cluster: PREDICTED: similar to tMDC III;
           n=1; Monodelphis domestica|Rep: PREDICTED: similar to
           tMDC III - Monodelphis domestica
          Length = 660

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 30  FCNLTNGRACADEILRNDQSCYLRSKYAVKFTGLCLEIIDAVQVKLG 76
           FCN T+     D  +RN + C+  + + V   G+C +I D  +   G
Sbjct: 513 FCNGTSHECVPDTFVRNGEKCHKNTAFCV--NGICADINDQCKAIFG 557


>UniRef50_Q8II70 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1846

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 79  FTKNNWN--HTGFVTDGGVNNTSESKGVRNTVTTNKVS 114
           FT NN N  HT F  +   NN  + K VRN  T N  S
Sbjct: 380 FTDNNTNADHTNFEINENTNNIKDVKNVRNINTCNNNS 417


>UniRef50_Q559C0 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1513

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 9    KHLLIDYRESYLGNVNTSPDTFCNLTNGRACADEILRNDQSCYLRSKYAVKFT 61
            K +L DY    + N N + D    ++N  +C  E  +ND   YL SK+  + T
Sbjct: 1339 KIILEDYNSDEINNQNDNDDLLSKISN-YSCIFETCQNDIIIYLFSKFRQQLT 1390


>UniRef50_Q83516 Cluster: Fusion glycoprotein F0; n=3;
           Paramyxovirinae|Rep: Fusion glycoprotein F0 - Murayama
           virus
          Length = 534

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 8/66 (12%)

Query: 54  SKYAVKFTGLCLEII-DAVQVKLGG-----YFTKNNWNHTGFVTDGGVNNTSESKGVRNT 107
           S   V  + +C E++ D VQ++L G     YFT    N +   T G ++ +SE   + NT
Sbjct: 394 SSLTVIDSAVCKEVVLDNVQLRLEGKLSSQYFTNVTINLSQITTSGSLDISSEIGNINNT 453

Query: 108 VTTNKV 113
           V  NKV
Sbjct: 454 V--NKV 457


>UniRef50_Q54RW9 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 213

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 30  FCNLTNGRACADEILRNDQSCYLRSKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGF 89
           FC  TN     ++   N Q   + S+Y  K   +    I+   + L      NN N+   
Sbjct: 123 FCP-TNSYCTLNQQNNNSQFFTVPSQYVTKSVSIPSHFINNTPISLSN--NNNNNNNNNI 179

Query: 90  VTDG-GVNNTSESKGVRNTVTTNKV 113
           + +    NN + SKG +N +   K+
Sbjct: 180 INNNINKNNNNNSKGFKNILILRKI 204


>UniRef50_Q6CC37 Cluster: Yarrowia lipolytica chromosome C of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome C of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 178

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 69  DAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSESKGVRN 106
           DA Q+KLG  F    + H GF T     +TSE++ + N
Sbjct: 25  DAAQLKLGPEFDVTQYTHDGFETALTALSTSEARSLIN 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,259,903
Number of Sequences: 1657284
Number of extensions: 5189967
Number of successful extensions: 10488
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10485
Number of HSP's gapped (non-prelim): 8
length of query: 114
length of database: 575,637,011
effective HSP length: 89
effective length of query: 25
effective length of database: 428,138,735
effective search space: 10703468375
effective search space used: 10703468375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)