Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001304-TA|BGIBMGA001304-PA|undefined
(114 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g51470.1 68418.m06383 auxin-responsive GH3 family protein sim... 27 2.3
At1g55325.1 68414.m06320 expressed protein 27 3.0
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 27 4.0
At3g14840.2 68416.m01875 leucine-rich repeat family protein / pr... 27 4.0
At3g14840.1 68416.m01874 leucine-rich repeat family protein / pr... 27 4.0
At5g39940.1 68418.m04843 expressed protein 26 5.3
At5g52560.1 68418.m06527 UDP-N-acetylglucosamine pyrophosphoryla... 26 7.0
At3g55800.1 68416.m06200 sedoheptulose-1,7-bisphosphatase, chlor... 26 7.0
At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase... 26 7.0
At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase... 26 7.0
At3g18000.1 68416.m02288 phosphoethanolamine N-methyltransferase... 25 9.2
At1g73600.2 68414.m08520 phosphoethanolamine N-methyltransferase... 25 9.2
At1g73600.1 68414.m08521 phosphoethanolamine N-methyltransferase... 25 9.2
>At5g51470.1 68418.m06383 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 581
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 66 EIIDAVQVKLGGYFTKNNWNHTG 88
EI+D V VKLG Y+ NH+G
Sbjct: 369 EIVDLVDVKLGCYYEPLVTNHSG 391
>At1g55325.1 68414.m06320 expressed protein
Length = 1921
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 54 SKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSES 101
+K+++K G + + A + K G++ KN +N +G + +++TS +
Sbjct: 376 AKFSLKRAG-DFDCLGASENKSDGFYEKNGYNSSGSSRNSSISSTSSA 422
>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile PF01301
: Glycosyl hydrolases family 35
Length = 988
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 24 NTSPDTFCNLTNGRACADEI---LRNDQSCYLRSKYAVKFTGL----CLEIIDAVQVKLG 76
N +P N NGR C D R+D+ + +F ++ + +
Sbjct: 165 NDAPGNLINACNGRHCGDTFPGPNRHDKPSLWTENWTTQFRVFGDPPTQRTVEDIAFSVA 224
Query: 77 GYFTKNNWNHTGFVTDGGVN 96
YF+KN + ++ GG N
Sbjct: 225 RYFSKNGSHVNYYMYHGGTN 244
>At3g14840.2 68416.m01875 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain; contains 2 predicted transmembrane domains
Length = 988
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 66 EIIDAVQVKLGGYFTKNNWNHT-----GFVTDGGVNNTSESKGVRNTVTTN 111
E +DA+Q + K+NWN + +++GG N + +KG + VT N
Sbjct: 32 EEVDALQ-SVATALKKSNWNFSVDPCDETLSEGGWRNPNAAKGFEDAVTCN 81
>At3g14840.1 68416.m01874 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain; contains 2 predicted transmembrane domains
Length = 112
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 66 EIIDAVQVKLGGYFTKNNWNHT-----GFVTDGGVNNTSESKGVRNTVTTN 111
E +DA+Q + K+NWN + +++GG N + +KG + VT N
Sbjct: 32 EEVDALQ-SVATALKKSNWNFSVDPCDETLSEGGWRNPNAAKGFEDAVTCN 81
>At5g39940.1 68418.m04843 expressed protein
Length = 480
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 8 DKHLLIDYRESYLGNVNTSPDTFCNLTNGRACADEI 43
D +L+ + S+L V S CN+TNG C D I
Sbjct: 69 DLRVLVIEKGSFLSKVKISGGGRCNVTNGH-CNDTI 103
>At5g52560.1 68418.m06527 UDP-N-acetylglucosamine
pyrophosphorylase-related contains weak similarity to
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
(Swiss-Prot:O74933) [Candida albicans]
Length = 614
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 63 LCLEIIDAVQVKLGGYFTKNNW 84
L ++ ID +VKLGG N W
Sbjct: 550 LIVDSIDDAEVKLGGLIKNNGW 571
>At3g55800.1 68416.m06200 sedoheptulose-1,7-bisphosphatase,
chloroplast / sedoheptulose-bisphosphatase identical to
SP|P46283 Sedoheptulose-1,7-bisphosphatase, chloroplast
precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase)
(SBPASE) (SED(1,7)P2ASE) {Arabidopsis thaliana}
Length = 393
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 51 YLRSKYAVKFTGLCLEIIDAVQVKLGGYFT 80
Y++ KY +++TG + ++ + VK G FT
Sbjct: 282 YVKEKYTLRYTGGMVPDVNQIIVKEKGIFT 311
>At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 491
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 47 DQSCYLRSKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSE 100
+Q C++ K +V+ +D VQ K G G+V+ GG T E
Sbjct: 220 NQICWIWQKVSVENDKDFQRFLDNVQYKSSGILRYERVFGEGYVSTGGFETTKE 273
>At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 475
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 47 DQSCYLRSKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSE 100
+Q C++ K +V+ +D VQ K G G+V+ GG T E
Sbjct: 204 NQICWIWQKVSVENDKDFQRFLDNVQYKSSGILRYERVFGEGYVSTGGFETTKE 257
>At3g18000.1 68416.m02288 phosphoethanolamine N-methyltransferase 1
/ PEAMT 1 (NMT1) identical to Phosphoethanolamine
N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1)
(SP:Q9FR44){Arabidopsis thaliana}; strong similarity to
phosphoethanolamine N-methyltransferase from [Spinacia
oleracea] GI:7407189, [Triticum aestivum] GI:17887465;
contains Pfam profile PF01209: methlytransferase,
UbiE/COQ5 family
Length = 491
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 47 DQSCYLRSKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSE 100
+Q C++ K + + +D VQ K G GFV+ GG+ T E
Sbjct: 220 NQICWIWQKVSSENDRGFQRFLDNVQYKSSGILRYERVFGQGFVSTGGLETTKE 273
>At1g73600.2 68414.m08520 phosphoethanolamine N-methyltransferase 3,
putative (NMT3) strong similarity to SP|Q9FR44
Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)
(PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to
SP|Q9C6B9 Putative phosphoethanolamine
N-methyltransferase 3 {Arabidopsis thaliana}
Length = 376
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 47 DQSCYLRSKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSE 100
+Q C+L K + +D VQ K G GFV+ GG+ T E
Sbjct: 233 NQICWLWQKVSSDNDRGFQRFLDNVQYKSSGILRYERVFGEGFVSTGGLETTKE 286
>At1g73600.1 68414.m08521 phosphoethanolamine N-methyltransferase 3,
putative (NMT3) strong similarity to SP|Q9FR44
Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)
(PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to
SP|Q9C6B9 Putative phosphoethanolamine
N-methyltransferase 3 {Arabidopsis thaliana}
Length = 555
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 47 DQSCYLRSKYAVKFTGLCLEIIDAVQVKLGGYFTKNNWNHTGFVTDGGVNNTSE 100
+Q C+L K + +D VQ K G GFV+ GG+ T E
Sbjct: 284 NQICWLWQKVSSDNDRGFQRFLDNVQYKSSGILRYERVFGEGFVSTGGLETTKE 337
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,895,888
Number of Sequences: 28952
Number of extensions: 113469
Number of successful extensions: 263
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 257
Number of HSP's gapped (non-prelim): 13
length of query: 114
length of database: 12,070,560
effective HSP length: 72
effective length of query: 42
effective length of database: 9,986,016
effective search space: 419412672
effective search space used: 419412672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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