Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001303-TA|BGIBMGA001303-PA|IPR006844|OST3/OST6,
IPR012336|Thioredoxin-like fold
(590 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 28 0.21
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 27 0.48
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.63
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.63
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 25 1.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 1.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 1.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 1.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 1.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 1.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 1.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 1.9
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 2.6
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 24 3.4
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 23 7.8
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 7.8
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 27.9 bits (59), Expect = 0.21
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 215 ATVNAKLQSKNLVEFLSVYVKPKGAPAPSNPVRPPNTSTFNSHDDEYDGHFLSNENESHG 274
A +N + NL S Y K N + P+ +NS D+ +DG F +N HG
Sbjct: 54 AWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHG 113
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 26.6 bits (56), Expect = 0.48
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 112 DDRECLGRIGGCLRGDAKTWLDEWVTGDRTWTNFKAEFRSL---CPREVD----MATVLY 164
D + LG CL+G+AK W + R + +F+ +F R+ D +AT Y
Sbjct: 176 DSQRLLGVAMDCLKGNAKHWTGIFQKKWRGYEDFRRDFLRTYWSAKRQRDIRFQIATGRY 235
Query: 165 DIMSTNSNKFTTYAEYARKSLLRLNIVKGLSDELKTAIVIRGISDPQVKAATVNAKL-QS 223
D T + +A Y + + + LS+E+ ++R + ++++ V K+ +
Sbjct: 236 D--ETRGTMLSHFAYYVDMANM---LTTPLSEEVLLDELLRHFPE-RIQSLWVLEKICTT 289
Query: 224 KNLVEFLSVYVKPKGAPAPSNPVRPPNTSTFNSH 257
+ EFL+ P P + P H
Sbjct: 290 TDAAEFLAAQEIPGQNPGEKTNIAPRERPRATDH 323
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 26.2 bits (55), Expect = 0.63
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 244 NPVRPPNTSTFNSHDDEYDGHFLSNENESHG 274
N + P+ +NS D+ +DG F +N HG
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHG 113
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 26.2 bits (55), Expect = 0.63
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 244 NPVRPPNTSTFNSHDDEYDGHFLSNENESHG 274
N + P+ +NS D+ +DG F +N HG
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHG 113
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 25.4 bits (53), Expect = 1.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 219 AKLQSKNLVEFLSVYVKPK 237
AK+ +K L+E S Y+KPK
Sbjct: 240 AKIAAKRLIEDFSGYIKPK 258
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 25.4 bits (53), Expect = 1.1
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 215 ATVNAKLQSKNLVEFLSVYVKPKGAPAPSNPVRPPNTSTFNSHDDEYDGHFLSNENESH 273
A +N + NL S Y K N + P+ +NS D+ +DG F +N H
Sbjct: 54 AWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKH 112
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 25.4 bits (53), Expect = 1.1
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 215 ATVNAKLQSKNLVEFLSVYVKPKGAPAPSNPVRPPNTSTFNSHDDEYDGHFLSNENESH 273
A +N + NL S Y K N + P+ +NS D+ +DG F +N H
Sbjct: 54 AWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKH 112
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 183
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 184 -TNNNNSKSG 192
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 183
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 184 -TNNNNSKSG 192
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 183
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 184 -TNNNNSKSG 192
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 183
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 184 -TNNNNSKSG 192
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 81 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 139
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 140 -TNNNNSKSG 148
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 183
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 184 -TNNNNSKSG 192
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 1.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAG- 183
Query: 265 FLSNENESHG 274
+N N G
Sbjct: 184 -TNNNNSKSG 192
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 2.6
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 208 SDPQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP---VRPPNTSTFNSHDDEYDGH 264
S P + + + +S L LSV P G PA S + P +ST ++ E G
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGT 184
Query: 265 FLSNENES 272
+N S
Sbjct: 185 NNNNSKSS 192
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.8 bits (49), Expect = 3.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 414 IAKWIQDRTDVQIRVFRSPNYSAAVAFSTLFIILA 448
I + QDR ++ + V+ +Y V F ++ ILA
Sbjct: 138 IVPYFQDRREMPLIVWFPFDYKQPVVFDLVYFILA 172
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 22.6 bits (46), Expect = 7.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 233 YVKPKGAPAPSNPVRPPNTSTFNSHD 258
Y K +P PS+ + TS+ N +D
Sbjct: 43 YTKDCSSPTPSDKLNTSTTSSVNVND 68
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.6 bits (46), Expect = 7.8
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 5 EGEGRLPVTAPLTSTPLLHPSAGGRTPTSASGANEVSVADAETHGTGQA 53
+G + P+ ++ ++ + G P+S+ ANE+S + T QA
Sbjct: 136 QGFAQQPMFPSMSVNVSMNMTMHGYHPSSSYPANEISCPQVQWSATPQA 184
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.321 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,221
Number of Sequences: 317
Number of extensions: 5641
Number of successful extensions: 32
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 26
length of query: 590
length of database: 114,650
effective HSP length: 61
effective length of query: 529
effective length of database: 95,313
effective search space: 50420577
effective search space used: 50420577
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)
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