Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001303-TA|BGIBMGA001303-PA|IPR006844|OST3/OST6,
IPR012336|Thioredoxin-like fold
(590 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L17337-3|AAA28222.1| 331|Caenorhabditis elegans Hypothetical pr... 242 6e-64
AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical ... 33 0.43
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 31 2.3
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 31 2.3
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 30 5.3
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 30 5.3
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 7.0
U40946-2|AAO91682.1| 780|Caenorhabditis elegans Hypothetical pr... 29 9.2
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 29 9.2
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 29 9.2
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 29 9.2
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 29 9.2
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 9.2
>L17337-3|AAA28222.1| 331|Caenorhabditis elegans Hypothetical
protein ZK686.3 protein.
Length = 331
Score = 242 bits (592), Expect = 6e-64
Identities = 120/312 (38%), Positives = 187/312 (59%), Gaps = 16/312 (5%)
Query: 292 LTDITAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHVNDEYLLVANS 351
L D+T+++S++ N++K+K V+ PR+YS +VMFTA++P +C IC+ DE+++VANS
Sbjct: 21 LVDLTSRQSIVKFNMDKWKTLVRMQPRNYSMIVMFTALSPGVQCPICKPAYDEFMIVANS 80
Query: 352 FRFSAAYNN--KLFFGIVDFDEGSDIFQMLRLNTAPVIMHF-PAKGKPKPADTMDFERAG 408
R++++ + K+FFGIVD+++ IFQ + LNTAP++ HF P G K + MDF+R G
Sbjct: 81 HRYTSSEGDRRKVFFGIVDYEDAPQIFQQMNLNTAPILYHFGPKLGAKKRPEQMDFQRQG 140
Query: 409 IHAEAIAKWIQDRTDVQIRVFRSPNYSAAVAFSTLFIILAGFLYIRRNNLEFLYNKQLWA 468
A+AI +++ D+T+V +RV R PNY+A V + +L G LY++RN+L+FL+N+ +W
Sbjct: 141 FDADAIGRFVADQTEVHVRVIRPPNYTAPVVIALFVALLLGMLYMKRNSLDFLFNRTVWG 200
Query: 469 VCAVFFCFAMVSGQMWNQIRGPPFF--HRTKTGPVYINGGSHGQFVLESYIVAILNGAVV 526
+ F +SGQMWN IRGPPF + P +I+G + Q + E+YIV +L +
Sbjct: 201 FVCLAITFIFMSGQMWNHIRGPPFMITNPNTKEPSFIHGSTQFQLIAETYIVGLLYALIA 260
Query: 527 VGMILMIEAAGGVKNHDPTRTLAEGKRRRFQ---------SVVGXXXXXXXXXXXXXXXR 577
+G I + EAA + D R A K ++ G R
Sbjct: 261 IGFICVNEAADQSNSKD--RKNAGKKLNPLSLLNIPTNTLAIAGLVCICVFFSFLLSVFR 318
Query: 578 AKTQGYPYSFLF 589
+K +GYPYSFLF
Sbjct: 319 SKYRGYPYSFLF 330
>AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical
protein W10G11.19 protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.43
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 155 REVDMATVLYDIMSTNSNKFTTYAEYARKSLLRLNIVKGLSDELKT-----AIVIRGISD 209
R + T+L+ I + S + YA++AR++ R ++ +S+E+K A + D
Sbjct: 270 RARETVTILF-IDTKKSQIWRNYAKFARENHGRFHLTALVSEEVKKWSIYPAFITMKPYD 328
Query: 210 PQVKAATVNAKLQSKNLVEFLSVYVKPKGAPAPSNP 245
P VKA T++ L +V++L V P G S+P
Sbjct: 329 PFVKAFTLHKDLNWNRMVDYLEDGVHP-GCHQLSSP 363
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 31.1 bits (67), Expect = 2.3
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 294 DITAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHVNDEYLLVANSFR 353
D + SV+ ++ +F+E V + + +++V F AP C CQ + E A
Sbjct: 74 DNSLNPSVMEMSPEQFEELVMNRKDEETWLVDF--FAPW--CGPCQQLAPELQKAARQI- 128
Query: 354 FSAAYNNKLFFGIVDFDEGSDIFQMLRLNTAPVIMHFPAK--GKPKPADTMDF-ERAGIH 410
AA++ +D + + ++N+ P + +PAK +P+ + D+ +
Sbjct: 129 --AAFDENAHVASIDCQKYAQFCTNTQINSYPTVRMYPAKKTKQPRRSPFYDYPNHMWRN 186
Query: 411 AEAIAKWI 418
+++I +W+
Sbjct: 187 SDSIQRWV 194
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 31.1 bits (67), Expect = 2.3
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 294 DITAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHVNDEYLLVANSFR 353
D + SV+ ++ +F+E V + + +++V F AP C CQ + E A
Sbjct: 544 DNSLNPSVMEMSPEQFEELVMNRKDEETWLVDF--FAPW--CGPCQQLAPELQKAARQI- 598
Query: 354 FSAAYNNKLFFGIVDFDEGSDIFQMLRLNTAPVIMHFPAK--GKPKPADTMDF-ERAGIH 410
AA++ +D + + ++N+ P + +PAK +P+ + D+ +
Sbjct: 599 --AAFDENAHVASIDCQKYAQFCTNTQINSYPTVRMYPAKKTKQPRRSPFYDYPNHMWRN 656
Query: 411 AEAIAKWI 418
+++I +W+
Sbjct: 657 SDSIQRWV 664
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 29.9 bits (64), Expect = 5.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 32 TSASGA-NEVSVADAETHGTGQASKALRDASVGTAD-RIVGALSSLLQVRSKHYYISNFD 89
+S SG+ N + DAET+ T + +A D ++ +S + V K+ +I NF+
Sbjct: 607 SSYSGSVNLLRALDAETNSTVTIQISTSEAQTLEVDPKLAHFVSITINVADKNDWIPNFE 666
Query: 90 PSVHEFD 96
+ +EFD
Sbjct: 667 SASYEFD 673
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 29.9 bits (64), Expect = 5.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 32 TSASGA-NEVSVADAETHGTGQASKALRDASVGTAD-RIVGALSSLLQVRSKHYYISNFD 89
+S SG+ N + DAET+ T + +A D ++ +S + V K+ +I NF+
Sbjct: 751 SSYSGSVNLLRALDAETNSTVTIQISTSEAQTLEVDPKLAHFVSITINVADKNDWIPNFE 810
Query: 90 PSVHEFD 96
+ +EFD
Sbjct: 811 SASYEFD 817
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 5 EGEGRLPVTAPLTS-TPLLHPSAGGRTPTSASGANEVSVADAETHGTGQASKALRDASVG 63
+G G P AP+ TP P+A + +N V + GT A+ A+ + +V
Sbjct: 204 QGAGDAPEPAPVVEETPAPTPAAEETPAPATEASNAVGTPEGYVDGTANAASAVAEPAVE 263
Query: 64 T 64
T
Sbjct: 264 T 264
>U40946-2|AAO91682.1| 780|Caenorhabditis elegans Hypothetical
protein W05H9.4 protein.
Length = 780
Score = 29.1 bits (62), Expect = 9.2
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 213 KAATVNAKLQSKNLVEFLSVYVKPK--GAPAPSNPV---RPPNTSTFNSHDDEYDGHFLS 267
K +T AK ++EF Y+K + P P+ + PN + ++ D+EYD
Sbjct: 638 KGSTATAKKMISEIMEFYMDYIKKRTNHFDLPEPPLARRQDPNCNPYS--DEEYDTELED 695
Query: 268 NENESHGDR 276
++E GD+
Sbjct: 696 EDDEVDGDQ 704
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 296 TAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHV 341
T+ SV+P ++ +PPR + M + + R+C +C+H+
Sbjct: 60 TSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSKFRQCDVCEHI 105
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 296 TAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHV 341
T+ SV+P ++ +PPR + M + + R+C +C+H+
Sbjct: 64 TSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSKFRQCDVCEHI 109
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 296 TAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHV 341
T+ SV+P ++ +PPR + M + + R+C +C+H+
Sbjct: 60 TSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSKFRQCDVCEHI 105
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 296 TAKKSVIPLNINKFKEYVKSPPRDYSFVVMFTAMAPARRCAICQHV 341
T+ SV+P ++ +PPR + M + + R+C +C+H+
Sbjct: 64 TSSSSVLPSTSSEPPPPASAPPRISIYHKMVPSKSKFRQCDVCEHI 109
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 249 PNTSTFNSHDDEYDGHFLSNENESHGDRVXXXXXXXXXXXXXXLTDITAKKSVIPLNINK 308
P +S+ +S DEY F E+ DRV TD T S+ PL+I +
Sbjct: 1342 PTSSSSSSDSDEYVHKFQVVPPETLDDRVGSPGAGSDEGSAGYATDDTVMSSLSPLDIKR 1401
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,320,564
Number of Sequences: 27539
Number of extensions: 605003
Number of successful extensions: 1633
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1622
Number of HSP's gapped (non-prelim): 15
length of query: 590
length of database: 12,573,161
effective HSP length: 85
effective length of query: 505
effective length of database: 10,232,346
effective search space: 5167334730
effective search space used: 5167334730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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