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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001302-TA|BGIBMGA001302-PA|IPR000245|ATPase, V0 complex,
proteolipid subunit C,, IPR002379|ATPase, F0/V0 complex, subunit C,
IPR011555|ATPase, V0 complex, proteolipid subunit C, eukaryotic
         (165 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po...   217   5e-58
SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosacch...   188   3e-49
SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces...    94   8e-21
SPMIT.10 |atp9||F0-ATPase subunit 9; similar to S. cerevisiae Q0...    34   0.009
SPAC664.04c |rps1602|rps16-2, rps16|40S ribosomal protein S16|Sc...    34   0.012
SPBC18H10.14 |rps1601|rps16-1|40S ribosomal protein S16|Schizosa...    34   0.012
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ...    31   0.11 
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos...    29   0.46 
SPAC869.11 ||SPAC922.08c|amino acid permease, unknown 6|Schizosa...    29   0.46 
SPAC227.06 |||Rab GTPase binding |Schizosaccharomyces pombe|chr ...    27   1.1  
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic...    27   1.9  
SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizos...    26   2.5  
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa...    25   4.3  
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c...    25   4.3  
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos...    25   4.3  
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce...    25   5.7  
SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|c...    25   5.7  
SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosa...    25   7.5  
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos...    25   7.5  
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo...    24   9.9  
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual    24   9.9  

>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 161

 Score =  217 bits (531), Expect = 5e-58
 Identities = 111/160 (69%), Positives = 131/160 (81%), Gaps = 12/160 (7%)

Query: 6   PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 65
           P+Y PFFGVMG  +AI+F++ GAAYGTAK+G GI+AM V+RP+LI+K+ IPVVMAGIIAI
Sbjct: 7   PVYAPFFGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAI 66

Query: 66  YGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGD 125
           YGLVV+VLI+G L++  +             Y GFI LGAGL+VG +GLAAGFAIGIVGD
Sbjct: 67  YGLVVSVLISGNLKQILSL------------YSGFIQLGAGLSVGLAGLAAGFAIGIVGD 114

Query: 126 AGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
           AGVRGTAQQPRLFV MILILIFAEVLGLYGLIVA+ L T+
Sbjct: 115 AGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLLNTR 154


>SPAC732.01 |vma11||V-type ATPase proteolipid
           subunit|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 162

 Score =  188 bits (459), Expect = 3e-49
 Identities = 93/160 (58%), Positives = 118/160 (73%), Gaps = 10/160 (6%)

Query: 6   PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 65
           PIY  FFG  G  ++++FS LGA YGTA +G GIAA+   RPE++MKS+IPVVM+GII +
Sbjct: 7   PIYSSFFGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGV 66

Query: 66  YGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGD 125
           YGLV++VLIAG +    +Y L+           GFIHL AGLAVG +G+AAG+AIG+VGD
Sbjct: 67  YGLVMSVLIAGDMSPDNDYSLFS----------GFIHLSAGLAVGLTGVAAGYAIGVVGD 116

Query: 126 AGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
            GV+   +Q R+FV M+LILIFAEVLGLYGLIV + L TK
Sbjct: 117 RGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156


>SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 199

 Score = 94.3 bits (224), Expect = 8e-21
 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 4/151 (2%)

Query: 12  FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 71
           +G++G AS + F  +GAA+G    GT I   +V  P +  K++I ++   ++AIY L++A
Sbjct: 45  WGLLGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIA 104

Query: 72  VLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131
           ++ +  + +      Y         Y GF     G+ VG   L  G  +GI G +     
Sbjct: 105 IVFSAKINDINPAGFYTKSH----YYTGFALFWGGITVGLCNLICGVCVGITGSSAALAD 160

Query: 132 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
           AQ   LFV ++++ IF  VLGL+GLIV + +
Sbjct: 161 AQDASLFVKVLVVEIFGSVLGLFGLIVGLLI 191



 Score = 41.1 bits (92), Expect = 8e-05
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 103 LGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
           LG    V F  + A + I I G + + G  + PR+    ++ +IF EV+ +Y LI+AI  
Sbjct: 48  LGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIAIVF 107

Query: 163 YTK 165
             K
Sbjct: 108 SAK 110



 Score = 28.3 bits (60), Expect = 0.61
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 35  SGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAG 76
           +G+  A        L +K ++  +   ++ ++GL+V +LI G
Sbjct: 152 TGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVGLLIGG 193


>SPMIT.10 |atp9||F0-ATPase subunit 9; similar to S. cerevisiae
           Q0130|Schizosaccharomyces pombe|chr
           mitochondrial|||Manual
          Length = 74

 Score = 34.3 bits (75), Expect = 0.009
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 102 HLGAGLA-VGFSGLAAGFAIGIVGDAGVRGTAQ----QPRLFVGMILILIFAEVLGLYGL 156
           ++GAGLA +G SG  AG  IG++    + GT++    +P LF   IL     E  GL+ L
Sbjct: 7   YIGAGLATIGVSG--AGVGIGLIFSNLISGTSRNPSVRPHLFSMAILGFALTEATGLFCL 64

Query: 157 IVAIYL 162
           ++A  +
Sbjct: 65  MLAFLI 70


>SPAC664.04c |rps1602|rps16-2, rps16|40S ribosomal protein
          S16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 140

 Score = 33.9 bits (74), Expect = 0.012
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELI-MKSIIPVVMAGIIAIYGLVV 70
          FG  G A+A+    +G   G  K     A +S+++PE++ MK   P+++AG     G+ +
Sbjct: 7  FGKKGNATAVAHCKVGK--GLIKVNG--APLSLVQPEILRMKVYEPILVAGADKFAGVDI 62

Query: 71 AVLIAGALQEPANYPLYKLVSGSVVKY 97
           V ++G       Y + + +S ++V Y
Sbjct: 63 RVRVSGGGHVSQIYAIRQAISKAIVAY 89


>SPBC18H10.14 |rps1601|rps16-1|40S ribosomal protein
          S16|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 140

 Score = 33.9 bits (74), Expect = 0.012
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELI-MKSIIPVVMAGIIAIYGLVV 70
          FG  G A+A+    +G   G  K     A +S+++PE++ MK   P+++AG     G+ +
Sbjct: 7  FGKKGNATAVAHCKVGK--GLIKVNG--APLSLVQPEILRMKVYEPILVAGADKFAGVDI 62

Query: 71 AVLIAGALQEPANYPLYKLVSGSVVKY 97
           V ++G       Y + + +S ++V Y
Sbjct: 63 RVRVSGGGHVSQIYAIRQAISKAIVAY 89


>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1337

 Score = 30.7 bits (66), Expect = 0.11
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 7    IYGPFFG-VMGAASAIIFSA--LGAAYGTAKS-GTGIAAMSVMRPELIMKSIIPVVMAGI 62
            I+G FFG ++G       S   LG AYG A   G  I  +  +R   ++ + +P V    
Sbjct: 975  IFGTFFGAILGMVIWYTGSGHGLGNAYGLAAVWGAAIPFIQFIRVHFVILTPMPAV---- 1030

Query: 63   IAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGF 111
              I+ +  A+ +  + +      +  L  G  V YR F+ + AG+ V F
Sbjct: 1031 --IFCVTAALTVTYSWKSNHEPGVVTLGIGWDVAYRRFLTVAAGITVAF 1077


>SPAC212.04c |||S. pombe specific DUF999 family protein
           1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 288

 Score = 28.7 bits (61), Expect = 0.46
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 48  ELIMKSI--IPVVMAGI---IAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIH 102
           +LI+K++  I +V+A +   IA + +++   IAG +    +  +   ++G +    G ++
Sbjct: 167 KLIIKALPLISMVIAWVGVVIAAFSVIITATIAGVIAA-FSVIITATIAGVIAAMVGILY 225

Query: 103 LGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131
            G  L      LA GF I   GD  V  T
Sbjct: 226 FGHWLVYKILILAFGFKIVTSGDVCVSNT 254


>SPAC869.11 ||SPAC922.08c|amino acid permease, unknown
           6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 580

 Score = 28.7 bits (61), Expect = 0.46
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 62  IIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFA 119
           ++A +G ++  +I      P ++  Y  + GS++K++ F H   G    F+  A  F+
Sbjct: 223 VVATFGFIILAIIINCGGVPTDHRGY--IGGSIIKHKPFRHGFKGFCSVFTTAAFSFS 278


>SPAC227.06 |||Rab GTPase binding |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 249

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 7   IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 66
           +YGPF+       A+ FS     Y    +G G +  S+       K +I    A II  Y
Sbjct: 87  LYGPFWITTTVIQALFFSNSITEYARYATGHGTSGYSI-------KKLISA--ASIIYGY 137

Query: 67  GLVVAVLIAGAL 78
             ++AVL+ G L
Sbjct: 138 TTIIAVLLWGIL 149


>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
            subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1729

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 11   FFG-VMGAASAIIFSALGAAYGTAKSGTGIAAMSVMR-PELIMKSIIPVVMAGIIAIYGL 68
            F+G ++G    + F+ +   +  ++ G      S      LI+ S+ P+V++ IIA +  
Sbjct: 1439 FYGEILGPLGTLFFTCIPFLFINSQPGNDDETQSTNAFIRLIIMSVAPLVLSAIIAFFFF 1498

Query: 69   VVAVLIAGALQEPA-NYPLY 87
             + +++   L + +  Y +Y
Sbjct: 1499 CLGIMLRPILGDRSKTYGVY 1518


>SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown
           7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 581

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 62  IIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFA 119
           +IA  G ++  +I      P ++  Y  + GS++K + F H   G    F+  A  F+
Sbjct: 223 VIATVGFIILAIIINCGGVPTDHRGY--IGGSIIKQKPFRHGFKGFCSVFTTAAFSFS 278


>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
           family 9|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 269

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)

Query: 49  LIMKSIIPVVMAGIIAIYGLVVAVL---IAGALQEPANYPLYKLV 90
           L +  +I  V+  IIA+ G+++A L   I G L    ++ LYKLV
Sbjct: 173 LRVTGVIIAVLGMIIAVLGMIIAALGATITGLLYF-GHWALYKLV 216


>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 579

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 9/58 (15%)

Query: 107 LAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 164
           +A+G +GLA G  IG+ G     G A     FV   L  +FA  LGL  +I A YL T
Sbjct: 173 IAMGLAGLAGGALIGLTG-----GLAAP---FVAAGLGTLFAG-LGLGTMIGATYLGT 221


>SPBC1348.01 |||S. pombe specific DUF999 protein family
           5|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 269

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)

Query: 49  LIMKSIIPVVMAGIIAIYGLVVAVL---IAGALQEPANYPLYKLV 90
           L +  +I  V+  IIA+ G+++A L   I G L    ++ LYKLV
Sbjct: 173 LRVTGVIIAVLGMIIAVLGMIIAALGATITGLLYF-GHWALYKLV 216


>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1242

 Score = 25.0 bits (52), Expect = 5.7
 Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 42   MSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFI 101
            M+ +  +++M+S++  +   ++A  G+ +  L+ GA+ E     LY  +    +  RG +
Sbjct: 1036 MNKLNLKIVMRSLVMALKYLLLAFLGIFILPLLLGAIWE-----LYVAIPFRTIFNRGTL 1090

Query: 102  HLGA 105
             L A
Sbjct: 1091 ALDA 1094


>SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 453

 Score = 25.0 bits (52), Expect = 5.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 141 MILILIFAEVLGLYGLIVAIYLYT 164
           ++++ +   V GL G IVA Y+YT
Sbjct: 358 VLVLQMITMVTGLLGAIVATYIYT 381


>SPCC1795.02c ||SPCC895.01|CaCA proton/calcium
           exchanger|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 412

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 90  VSGSVVKYRGFIHLGAGLAVGFS 112
           V+  VV YRG + L  G+A+G S
Sbjct: 316 VTAIVVSYRGQMDLALGVAIGSS 338


>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 556

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 25  ALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGAL 78
           AL   +G   +   +  +    P+L+   I   V+ G+I + GL + +  +GA+
Sbjct: 354 ALVEYFGNIDATARLGVIISKEPKLLGLYIFIGVLLGLIGVIGLFICLHFSGAM 407


>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 689

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 27  GAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPL 86
           G   G A   T +   SV+  +  +    P V+ G+ A+Y L+   ++A     PA+   
Sbjct: 313 GGVLGYASPRT-LTDASVVNCKGDLTEFRPTVLIGVPAVYELIKKGILAKVSSMPAH--R 369

Query: 87  YKLVSGSV 94
            K+ SGS+
Sbjct: 370 QKVFSGSL 377


>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 973

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 478 GVVTETVVSGSVGYTTTYPAHDTVSGTV 505



 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 548 GVVTETVVSGSVGYTTTYPAHDTVSGTV 575



 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 583 GVVTETVVSGSVGYTTTYPAHDTVSGTV 610



 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 618 GVVTETVVSGSVGYTTTYPAHDTVSGTV 645



 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 653 GVVTETVVSGSVGYTTTYPAHDTVSGTV 680



 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 688 GVVTETVVSGSVGYTTTYPAHDTVSGTV 715



 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 67  GLVVAVLIAGALQEPANYPLYKLVSGSV 94
           G+V   +++G++     YP +  VSG+V
Sbjct: 723 GVVTETVVSGSVGYTTTYPAHDTVSGTV 750


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.327    0.145    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,981
Number of Sequences: 5004
Number of extensions: 21873
Number of successful extensions: 114
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 80
Number of HSP's gapped (non-prelim): 33
length of query: 165
length of database: 2,362,478
effective HSP length: 68
effective length of query: 97
effective length of database: 2,022,206
effective search space: 196153982
effective search space used: 196153982
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)

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