BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001302-TA|BGIBMGA001302-PA|IPR000245|ATPase, V0 complex, proteolipid subunit C,, IPR002379|ATPase, F0/V0 complex, subunit C, IPR011555|ATPase, V0 complex, proteolipid subunit C, eukaryotic (165 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 217 5e-58 SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosacch... 188 3e-49 SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces... 94 8e-21 SPMIT.10 |atp9||F0-ATPase subunit 9; similar to S. cerevisiae Q0... 34 0.009 SPAC664.04c |rps1602|rps16-2, rps16|40S ribosomal protein S16|Sc... 34 0.012 SPBC18H10.14 |rps1601|rps16-1|40S ribosomal protein S16|Schizosa... 34 0.012 SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 31 0.11 SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 29 0.46 SPAC869.11 ||SPAC922.08c|amino acid permease, unknown 6|Schizosa... 29 0.46 SPAC227.06 |||Rab GTPase binding |Schizosaccharomyces pombe|chr ... 27 1.1 SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 1.9 SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizos... 26 2.5 SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 25 4.3 SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 25 4.3 SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 25 4.3 SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 25 5.7 SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|c... 25 5.7 SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosa... 25 7.5 SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 25 7.5 SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 24 9.9 SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 24 9.9 >SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces pombe|chr 1|||Manual Length = 161 Score = 217 bits (531), Expect = 5e-58 Identities = 111/160 (69%), Positives = 131/160 (81%), Gaps = 12/160 (7%) Query: 6 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 65 P+Y PFFGVMG +AI+F++ GAAYGTAK+G GI+AM V+RP+LI+K+ IPVVMAGIIAI Sbjct: 7 PVYAPFFGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAI 66 Query: 66 YGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGD 125 YGLVV+VLI+G L++ + Y GFI LGAGL+VG +GLAAGFAIGIVGD Sbjct: 67 YGLVVSVLISGNLKQILSL------------YSGFIQLGAGLSVGLAGLAAGFAIGIVGD 114 Query: 126 AGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165 AGVRGTAQQPRLFV MILILIFAEVLGLYGLIVA+ L T+ Sbjct: 115 AGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLLNTR 154 >SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosaccharomyces pombe|chr 1|||Manual Length = 162 Score = 188 bits (459), Expect = 3e-49 Identities = 93/160 (58%), Positives = 118/160 (73%), Gaps = 10/160 (6%) Query: 6 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 65 PIY FFG G ++++FS LGA YGTA +G GIAA+ RPE++MKS+IPVVM+GII + Sbjct: 7 PIYSSFFGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGV 66 Query: 66 YGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGD 125 YGLV++VLIAG + +Y L+ GFIHL AGLAVG +G+AAG+AIG+VGD Sbjct: 67 YGLVMSVLIAGDMSPDNDYSLFS----------GFIHLSAGLAVGLTGVAAGYAIGVVGD 116 Query: 126 AGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165 GV+ +Q R+FV M+LILIFAEVLGLYGLIV + L TK Sbjct: 117 RGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156 >SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces pombe|chr 1|||Manual Length = 199 Score = 94.3 bits (224), Expect = 8e-21 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 4/151 (2%) Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 71 +G++G AS + F +GAA+G GT I +V P + K++I ++ ++AIY L++A Sbjct: 45 WGLLGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIA 104 Query: 72 VLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131 ++ + + + Y Y GF G+ VG L G +GI G + Sbjct: 105 IVFSAKINDINPAGFYTKSH----YYTGFALFWGGITVGLCNLICGVCVGITGSSAALAD 160 Query: 132 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162 AQ LFV ++++ IF VLGL+GLIV + + Sbjct: 161 AQDASLFVKVLVVEIFGSVLGLFGLIVGLLI 191 Score = 41.1 bits (92), Expect = 8e-05 Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 103 LGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162 LG V F + A + I I G + + G + PR+ ++ +IF EV+ +Y LI+AI Sbjct: 48 LGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIAIVF 107 Query: 163 YTK 165 K Sbjct: 108 SAK 110 Score = 28.3 bits (60), Expect = 0.61 Identities = 10/42 (23%), Positives = 22/42 (52%) Query: 35 SGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAG 76 +G+ A L +K ++ + ++ ++GL+V +LI G Sbjct: 152 TGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVGLLIGG 193 >SPMIT.10 |atp9||F0-ATPase subunit 9; similar to S. cerevisiae Q0130|Schizosaccharomyces pombe|chr mitochondrial|||Manual Length = 74 Score = 34.3 bits (75), Expect = 0.009 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%) Query: 102 HLGAGLA-VGFSGLAAGFAIGIVGDAGVRGTAQ----QPRLFVGMILILIFAEVLGLYGL 156 ++GAGLA +G SG AG IG++ + GT++ +P LF IL E GL+ L Sbjct: 7 YIGAGLATIGVSG--AGVGIGLIFSNLISGTSRNPSVRPHLFSMAILGFALTEATGLFCL 64 Query: 157 IVAIYL 162 ++A + Sbjct: 65 MLAFLI 70 >SPAC664.04c |rps1602|rps16-2, rps16|40S ribosomal protein S16|Schizosaccharomyces pombe|chr 1|||Manual Length = 140 Score = 33.9 bits (74), Expect = 0.012 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELI-MKSIIPVVMAGIIAIYGLVV 70 FG G A+A+ +G G K A +S+++PE++ MK P+++AG G+ + Sbjct: 7 FGKKGNATAVAHCKVGK--GLIKVNG--APLSLVQPEILRMKVYEPILVAGADKFAGVDI 62 Query: 71 AVLIAGALQEPANYPLYKLVSGSVVKY 97 V ++G Y + + +S ++V Y Sbjct: 63 RVRVSGGGHVSQIYAIRQAISKAIVAY 89 >SPBC18H10.14 |rps1601|rps16-1|40S ribosomal protein S16|Schizosaccharomyces pombe|chr 2|||Manual Length = 140 Score = 33.9 bits (74), Expect = 0.012 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELI-MKSIIPVVMAGIIAIYGLVV 70 FG G A+A+ +G G K A +S+++PE++ MK P+++AG G+ + Sbjct: 7 FGKKGNATAVAHCKVGK--GLIKVNG--APLSLVQPEILRMKVYEPILVAGADKFAGVDI 62 Query: 71 AVLIAGALQEPANYPLYKLVSGSVVKY 97 V ++G Y + + +S ++V Y Sbjct: 63 RVRVSGGGHVSQIYAIRQAISKAIVAY 89 >SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 1337 Score = 30.7 bits (66), Expect = 0.11 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 10/109 (9%) Query: 7 IYGPFFG-VMGAASAIIFSA--LGAAYGTAKS-GTGIAAMSVMRPELIMKSIIPVVMAGI 62 I+G FFG ++G S LG AYG A G I + +R ++ + +P V Sbjct: 975 IFGTFFGAILGMVIWYTGSGHGLGNAYGLAAVWGAAIPFIQFIRVHFVILTPMPAV---- 1030 Query: 63 IAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGF 111 I+ + A+ + + + + L G V YR F+ + AG+ V F Sbjct: 1031 --IFCVTAALTVTYSWKSNHEPGVVTLGIGWDVAYRRFLTVAAGITVAF 1077 >SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 288 Score = 28.7 bits (61), Expect = 0.46 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Query: 48 ELIMKSI--IPVVMAGI---IAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIH 102 +LI+K++ I +V+A + IA + +++ IAG + + + ++G + G ++ Sbjct: 167 KLIIKALPLISMVIAWVGVVIAAFSVIITATIAGVIAA-FSVIITATIAGVIAAMVGILY 225 Query: 103 LGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131 G L LA GF I GD V T Sbjct: 226 FGHWLVYKILILAFGFKIVTSGDVCVSNT 254 >SPAC869.11 ||SPAC922.08c|amino acid permease, unknown 6|Schizosaccharomyces pombe|chr 1|||Manual Length = 580 Score = 28.7 bits (61), Expect = 0.46 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 62 IIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFA 119 ++A +G ++ +I P ++ Y + GS++K++ F H G F+ A F+ Sbjct: 223 VVATFGFIILAIIINCGGVPTDHRGY--IGGSIIKHKPFRHGFKGFCSVFTTAAFSFS 278 >SPAC227.06 |||Rab GTPase binding |Schizosaccharomyces pombe|chr 1|||Manual Length = 249 Score = 27.5 bits (58), Expect = 1.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 9/72 (12%) Query: 7 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 66 +YGPF+ A+ FS Y +G G + S+ K +I A II Y Sbjct: 87 LYGPFWITTTVIQALFFSNSITEYARYATGHGTSGYSI-------KKLISA--ASIIYGY 137 Query: 67 GLVVAVLIAGAL 78 ++AVL+ G L Sbjct: 138 TTIIAVLLWGIL 149 >SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1729 Score = 26.6 bits (56), Expect = 1.9 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 11 FFG-VMGAASAIIFSALGAAYGTAKSGTGIAAMSVMR-PELIMKSIIPVVMAGIIAIYGL 68 F+G ++G + F+ + + ++ G S LI+ S+ P+V++ IIA + Sbjct: 1439 FYGEILGPLGTLFFTCIPFLFINSQPGNDDETQSTNAFIRLIIMSVAPLVLSAIIAFFFF 1498 Query: 69 VVAVLIAGALQEPA-NYPLY 87 + +++ L + + Y +Y Sbjct: 1499 CLGIMLRPILGDRSKTYGVY 1518 >SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizosaccharomyces pombe|chr 2|||Manual Length = 581 Score = 26.2 bits (55), Expect = 2.5 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 62 IIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFA 119 +IA G ++ +I P ++ Y + GS++K + F H G F+ A F+ Sbjct: 223 VIATVGFIILAIIINCGGVPTDHRGY--IGGSIIKQKPFRHGFKGFCSVFTTAAFSFS 278 >SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein family 9|Schizosaccharomyces pombe|chr 2|||Manual Length = 269 Score = 25.4 bits (53), Expect = 4.3 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%) Query: 49 LIMKSIIPVVMAGIIAIYGLVVAVL---IAGALQEPANYPLYKLV 90 L + +I V+ IIA+ G+++A L I G L ++ LYKLV Sbjct: 173 LRVTGVIIAVLGMIIAVLGMIIAALGATITGLLYF-GHWALYKLV 216 >SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 579 Score = 25.4 bits (53), Expect = 4.3 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 9/58 (15%) Query: 107 LAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 164 +A+G +GLA G IG+ G G A FV L +FA LGL +I A YL T Sbjct: 173 IAMGLAGLAGGALIGLTG-----GLAAP---FVAAGLGTLFAG-LGLGTMIGATYLGT 221 >SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizosaccharomyces pombe|chr 2|||Manual Length = 269 Score = 25.4 bits (53), Expect = 4.3 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%) Query: 49 LIMKSIIPVVMAGIIAIYGLVVAVL---IAGALQEPANYPLYKLV 90 L + +I V+ IIA+ G+++A L I G L ++ LYKLV Sbjct: 173 LRVTGVIIAVLGMIIAVLGMIIAALGATITGLLYF-GHWALYKLV 216 >SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1242 Score = 25.0 bits (52), Expect = 5.7 Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Query: 42 MSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFI 101 M+ + +++M+S++ + ++A G+ + L+ GA+ E LY + + RG + Sbjct: 1036 MNKLNLKIVMRSLVMALKYLLLAFLGIFILPLLLGAIWE-----LYVAIPFRTIFNRGTL 1090 Query: 102 HLGA 105 L A Sbjct: 1091 ALDA 1094 >SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 453 Score = 25.0 bits (52), Expect = 5.7 Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 141 MILILIFAEVLGLYGLIVAIYLYT 164 ++++ + V GL G IVA Y+YT Sbjct: 358 VLVLQMITMVTGLLGAIVATYIYT 381 >SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosaccharomyces pombe|chr 3|||Manual Length = 412 Score = 24.6 bits (51), Expect = 7.5 Identities = 11/23 (47%), Positives = 15/23 (65%) Query: 90 VSGSVVKYRGFIHLGAGLAVGFS 112 V+ VV YRG + L G+A+G S Sbjct: 316 VTAIVVSYRGQMDLALGVAIGSS 338 >SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 556 Score = 24.6 bits (51), Expect = 7.5 Identities = 13/54 (24%), Positives = 26/54 (48%) Query: 25 ALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGAL 78 AL +G + + + P+L+ I V+ G+I + GL + + +GA+ Sbjct: 354 ALVEYFGNIDATARLGVIISKEPKLLGLYIFIGVLLGLIGVIGLFICLHFSGAM 407 >SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 689 Score = 24.2 bits (50), Expect = 9.9 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 27 GAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPL 86 G G A T + SV+ + + P V+ G+ A+Y L+ ++A PA+ Sbjct: 313 GGVLGYASPRT-LTDASVVNCKGDLTEFRPTVLIGVPAVYELIKKGILAKVSSMPAH--R 369 Query: 87 YKLVSGSV 94 K+ SGS+ Sbjct: 370 QKVFSGSL 377 >SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual Length = 973 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 478 GVVTETVVSGSVGYTTTYPAHDTVSGTV 505 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 548 GVVTETVVSGSVGYTTTYPAHDTVSGTV 575 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 583 GVVTETVVSGSVGYTTTYPAHDTVSGTV 610 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 618 GVVTETVVSGSVGYTTTYPAHDTVSGTV 645 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 653 GVVTETVVSGSVGYTTTYPAHDTVSGTV 680 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 688 GVVTETVVSGSVGYTTTYPAHDTVSGTV 715 Score = 24.2 bits (50), Expect = 9.9 Identities = 9/28 (32%), Positives = 17/28 (60%) Query: 67 GLVVAVLIAGALQEPANYPLYKLVSGSV 94 G+V +++G++ YP + VSG+V Sbjct: 723 GVVTETVVSGSVGYTTTYPAHDTVSGTV 750 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.327 0.145 0.414 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 629,981 Number of Sequences: 5004 Number of extensions: 21873 Number of successful extensions: 114 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 80 Number of HSP's gapped (non-prelim): 33 length of query: 165 length of database: 2,362,478 effective HSP length: 68 effective length of query: 97 effective length of database: 2,022,206 effective search space: 196153982 effective search space used: 196153982 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 50 (24.2 bits)
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