Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001302-TA|BGIBMGA001302-PA|IPR000245|ATPase, V0 complex,
proteolipid subunit C,, IPR002379|ATPase, F0/V0 complex, subunit C,
IPR011555|ATPase, V0 complex, proteolipid subunit C, eukaryotic
(165 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 200 6e-52
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 199 8e-52
05_01_0043 - 295041-295173,296252-296537,296616-296697 198 2e-51
01_07_0267 + 42410174-42410252,42410679-42411097 194 2e-50
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 146 6e-36
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 92 2e-19
03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826 30 1.1
10_08_0401 + 17629912-17630376 29 1.9
05_04_0242 + 19336663-19336789,19337071-19337290,19337392-193374... 29 1.9
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 29 2.5
03_02_0024 + 5079690-5081351 29 2.5
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823... 28 3.3
08_01_0724 - 6426263-6426514,6428511-6428742,6429081-6429400,643... 28 3.3
06_03_0363 + 19904002-19905792 28 4.3
04_04_0819 - 28312667-28313219,28315157-28316430 27 5.7
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 27 5.7
03_05_0041 - 20169308-20169317,20169485-20170491 27 5.7
04_04_1661 + 35146662-35147288 27 7.5
04_03_0831 - 20133298-20133401,20133500-20133586,20133984-201340... 27 7.5
10_08_0876 - 21223097-21223645 27 10.0
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 200 bits (487), Expect = 6e-52
Identities = 100/156 (64%), Positives = 121/156 (77%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + P P Y + G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 72 IAVIISTGI-NPKAKPYY--------LFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 122
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 158
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 199 bits (486), Expect = 8e-52
Identities = 99/156 (63%), Positives = 121/156 (77%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + P P Y + G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 72 IAVIISTGI-NPKAKPYY--------LFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 122
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 158
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 198 bits (482), Expect = 2e-51
Identities = 98/156 (62%), Positives = 121/156 (77%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + P P + + G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 73 IAVIISTGI-NPKAKPYF--------LFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 123
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 124 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 159
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 194 bits (474), Expect = 2e-50
Identities = 97/162 (59%), Positives = 118/162 (72%), Gaps = 9/162 (5%)
Query: 4 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 63
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 64 AIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIV 123
IYGL++AV+I + P P Y + G +HL AGLA G LAAG AIG+V
Sbjct: 66 GIYGLIIAVIITTGI-NPTAMPYY--------HFDGSVHLAAGLATGLCALAAGLAIGVV 116
Query: 124 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
GDAGVR AQQP+LFVGMILILIFAE LGLYGLIV I L ++
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALGLYGLIVGIILSSR 158
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 146 bits (355), Expect = 6e-36
Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 9/120 (7%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + P P + + G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 74 IAVIISTGI-NPKAKPYF--------LFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 159
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 16 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 75
Query: 160 IYLYT 164
+ + T
Sbjct: 76 VIIST 80
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/33 (27%), Positives = 23/33 (69%)
Query: 43 SVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 75
+ +P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 158 NAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 91.9 bits (218), Expect = 2e-19
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 71
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 72 VLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131
+++ L+ LV G+ +GL VGF+ L G +GI+G +
Sbjct: 80 IILQTKLESVPT----ALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSD 135
Query: 132 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 136 AQNSSLFVKILVIEIFGSALGLFGVIVGIIM 166
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 159
F +G +++G S L A + I I G + + + PR+ ++ +IF E + +YG+IVA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 160 IYLYTK 165
I L TK
Sbjct: 80 IILQTK 85
>03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826
Length = 196
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 95 VKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 135
++ R +HL G+AVG GL G + GD R A+ P
Sbjct: 154 LRVRAGVHLDVGVAVGDQGLEVGLL--VAGDEAERAQARAP 192
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 14 VMGAASAIIFSALGAAYGTAKSGTGIAA 41
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>05_04_0242 +
19336663-19336789,19337071-19337290,19337392-19337437,
19337559-19337675
Length = 169
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 6 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 65
PIY P G + +IF+ L G + S TG+ +S P +M + ++ + +
Sbjct: 54 PIYFPI-GNLATGFFVIFALLAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTL 112
Query: 66 YGLVVAVL-IAGALQEPANYPLYK---LVSGSVVKYRGFIHLGAGLAV 109
+ +A I+ + P+ L +++G+ + G +H GA +A+
Sbjct: 113 LAMGLACKEISIGWRPPSLRALETFTIILAGTQLLCAGSLHAGAHVAI 160
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 98 RGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILI 144
RG + LG + V +GL +V A VRG GM+L+
Sbjct: 341 RGSVGLGMAVRVAMAGLGTNRVAAVVSAAAVRGHNAGGGALEGMVLV 387
>03_02_0024 + 5079690-5081351
Length = 553
Score = 28.7 bits (61), Expect = 2.5
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 41 AMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGF 100
A M+ +L + V+AGII IY L V L AG + Y +V SV+ + G
Sbjct: 81 AQKFMKKDLNISDAKVEVLAGIINIYSL-VGSLAAGRTSDWIG-RRYTMVLASVIFFAGA 138
Query: 101 IHLG--------------AGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ-PRLFVGMILIL 145
+ +G AG+ VG++ + A V RG P +F+ ++L
Sbjct: 139 LIMGLAPSYAIVMLGRFVAGVGVGYALMIAPVYTAEVAPTSARGLLTSFPEVFINAGVLL 198
Query: 146 IFAEVLGLYGL 156
+ Y L
Sbjct: 199 GYVSNFAFYRL 209
>12_02_0917 +
24281029-24281137,24281998-24282095,24282196-24282372,
24282490-24282590,24282684-24282759,24282843-24282902,
24282999-24283195,24283296-24283392,24283478-24283564,
24283925-24283983,24284535-24284626,24284706-24284783,
24284891-24285051,24285303-24285530
Length = 539
Score = 28.3 bits (60), Expect = 3.3
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 6 PIY--GPFFGVMGAASAIIFSALGAAYGTAK-SGTGIAAMSVMRPELIMKSIIPVVMAGI 62
PI+ G FG+MGA F + GA + TA+ +G SV+ + ++ I + + GI
Sbjct: 285 PIFTAGHSFGMMGAVLVSAFESTGAHFATARLAGATPPPASVLSRSVGLQG-IGMFLEGI 343
Query: 63 I-AIYGLVVAVLIAG--ALQEPANYPLYKLVSGSVVKYRGFIHLGAGLA-VGFSGLAAGF 118
A G V+V G L + + + ++ +G ++ + F GA A + AA F
Sbjct: 344 FGAPAGSSVSVENIGLLGLTKVGSRRVIQISTGFMIFFSIFGKFGAFFASIPLPIFAAIF 403
Query: 119 AI--GIVGDAGV 128
I GIV GV
Sbjct: 404 CILFGIVAAVGV 415
>08_01_0724 -
6426263-6426514,6428511-6428742,6429081-6429400,
6433071-6433163,6433188-6433354,6433432-6433846
Length = 492
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 117 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGL 153
G +G+ G+ G++ A++P L + L+ A +LG+
Sbjct: 234 GIDLGLTGERGIKDGARRPELEKNSSISLLEARILGI 270
>06_03_0363 + 19904002-19905792
Length = 596
Score = 27.9 bits (59), Expect = 4.3
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 6 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMK-SIIPVVMAGIIA 64
PIY +GAA +FS+L + T V L+ + + G +
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459
Query: 65 IYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAA 116
+ +A+++ ++ A Y S ++ G+ G G A G +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYN-----SRYARRWPGYAAFGCGWAAGAAGLAA 506
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 27.5 bits (58), Expect = 5.7
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 68 LVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFI-----HLGA-GLAVGFSGLAAGFAIG 121
L+V V+ A+ P LV SV GF+ HL G VG+ GLA A+
Sbjct: 342 LLVMVVGLMAMLVPNFADFLSLVGSSVCVLLGFVLPAAFHLKVFGAEVGWPGLAGDVAVI 401
Query: 122 IVGDA-GVRGT 131
+VG A V GT
Sbjct: 402 VVGTALAVSGT 412
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 106 GLAVGFSGLAAGFAIGIVGDAGVR 129
G A+ F G AG A+G+VG++G R
Sbjct: 26 GGALIFGGRFAGVAVGVVGESGSR 49
>03_05_0041 - 20169308-20169317,20169485-20170491
Length = 338
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 57 VVMAGIIAIYGLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAA 116
V MAG + IY V+ + G ++ P++ + S F + G+G+ +G G A
Sbjct: 215 VWMAGALFIYFFSVSGGMYGIIRHT---PMF-ITDRSDPNKLVFFYQGSGMQLGAEGFAV 270
Query: 117 GFAIGIVG 124
GF +VG
Sbjct: 271 GFLYTLVG 278
>04_04_1661 + 35146662-35147288
Length = 208
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 53 SIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKLVSG--SVVKYRGFIHLGAGLAVG 110
+++P++ AG I Y L +AV++A A A + V G +V + + LG A+G
Sbjct: 135 AVVPLLAAGFIVNYRLRIAVVVAVASVALAAFGCVGAVLGRAAVARSSARVVLGGWAAMG 194
Query: 111 FS 112
+
Sbjct: 195 IT 196
>04_03_0831 -
20133298-20133401,20133500-20133586,20133984-20134092,
20134272-20134442,20136059-20136208,20136765-20136872,
20137725-20137780,20138061-20138124,20138198-20138209
Length = 286
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 59
P FGV + ++I +G+ Y +SG + A + L + PV++
Sbjct: 9 PTFGVGHSLGSVIHLLIGSRYAVQRSGNILMAFNNKEASLAVPLFSPVIV 58
>10_08_0876 - 21223097-21223645
Length = 182
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 15 MGAASAII--FSALGAAYGTAKSGTGIAAMSVMR 46
+GAA A + F+ GAA+ +A +G G AM V R
Sbjct: 99 LGAADAAVRTFAGSGAAHASAGAGPGRRAMLVCR 132
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.327 0.145 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,329,629
Number of Sequences: 37544
Number of extensions: 173410
Number of successful extensions: 687
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 653
Number of HSP's gapped (non-prelim): 27
length of query: 165
length of database: 14,793,348
effective HSP length: 77
effective length of query: 88
effective length of database: 11,902,460
effective search space: 1047416480
effective search space used: 1047416480
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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