Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001302-TA|BGIBMGA001302-PA|IPR000245|ATPase, V0 complex,
proteolipid subunit C,, IPR002379|ATPase, F0/V0 complex, subunit C,
IPR011555|ATPase, V0 complex, proteolipid subunit C, eukaryotic
(165 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 206 6e-54
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 206 6e-54
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 206 6e-54
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 206 6e-54
Z29095-8|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 190 4e-49
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 190 4e-49
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 95 3e-20
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 95 3e-20
U23515-3|AAU87817.1| 345|Caenorhabditis elegans Hypothetical pr... 29 1.7
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 29 2.2
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 29 2.2
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 29 2.2
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 2.9
Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical pr... 27 6.7
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 27 8.9
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 27 8.9
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 27 8.9
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 206 bits (503), Expect = 6e-54
Identities = 109/158 (68%), Positives = 121/158 (76%), Gaps = 11/158 (6%)
Query: 8 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 67
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 68 LVVAVLIAGAL-QEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDA 126
LVVA+++ G + A Y L K GF HL AGL G GL AG+AIGIVGDA
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNK----------GFAHLAAGLTCGLCGLGAGYAIGIVGDA 122
Query: 127 GVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 164
GVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 123 GVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.1 bits (77), Expect = 0.025
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 87 YKLVSGSVVKYRGFI-HLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMIL 143
Y L + Y F ++GA A F+ G A G A VG + +P L + ++
Sbjct: 3 YDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVI 60
Query: 144 ILIFAEVLGLYGLIVAIYLYTK 165
+I A ++G+YGL+VA+ L K
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGK 82
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 206 bits (503), Expect = 6e-54
Identities = 109/158 (68%), Positives = 121/158 (76%), Gaps = 11/158 (6%)
Query: 8 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 67
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 68 LVVAVLIAGAL-QEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDA 126
LVVA+++ G + A Y L K GF HL AGL G GL AG+AIGIVGDA
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNK----------GFAHLAAGLTCGLCGLGAGYAIGIVGDA 122
Query: 127 GVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 164
GVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 123 GVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.1 bits (77), Expect = 0.025
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 87 YKLVSGSVVKYRGFI-HLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMIL 143
Y L + Y F ++GA A F+ G A G A VG + +P L + ++
Sbjct: 3 YDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVI 60
Query: 144 ILIFAEVLGLYGLIVAIYLYTK 165
+I A ++G+YGL+VA+ L K
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGK 82
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 206 bits (503), Expect = 6e-54
Identities = 109/158 (68%), Positives = 121/158 (76%), Gaps = 11/158 (6%)
Query: 8 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 67
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 68 LVVAVLIAGAL-QEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDA 126
LVVA+++ G + A Y L K GF HL AGL G GL AG+AIGIVGDA
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNK----------GFAHLAAGLTCGLCGLGAGYAIGIVGDA 122
Query: 127 GVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 164
GVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 123 GVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.1 bits (77), Expect = 0.025
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 87 YKLVSGSVVKYRGFI-HLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMIL 143
Y L + Y F ++GA A F+ G A G A VG + +P L + ++
Sbjct: 3 YDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVI 60
Query: 144 ILIFAEVLGLYGLIVAIYLYTK 165
+I A ++G+YGL+VA+ L K
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGK 82
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 206 bits (503), Expect = 6e-54
Identities = 109/158 (68%), Positives = 121/158 (76%), Gaps = 11/158 (6%)
Query: 8 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 67
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 68 LVVAVLIAGAL-QEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDA 126
LVVA+++ G + A Y L K GF HL AGL G GL AG+AIGIVGDA
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNK----------GFAHLAAGLTCGLCGLGAGYAIGIVGDA 122
Query: 127 GVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYT 164
GVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 123 GVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.1 bits (77), Expect = 0.025
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 87 YKLVSGSVVKYRGFI-HLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMIL 143
Y L + Y F ++GA A F+ G A G A VG + +P L + ++
Sbjct: 3 YDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVI 60
Query: 144 ILIFAEVLGLYGLIVAIYLYTK 165
+I A ++G+YGL+VA+ L K
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGK 82
>Z29095-8|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 190 bits (463), Expect = 4e-49
Identities = 96/157 (61%), Positives = 119/157 (75%), Gaps = 11/157 (7%)
Query: 7 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 66
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 67 GLVVAVLIAGALQEP-ANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGD 125
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI GD
Sbjct: 80 GLVVAVIVSGKVEPAGANYTI----------NNAFSQFAGGLVCGLCGLGAGYAIGIAGD 129
Query: 126 AGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
AGVR +QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 130 AGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 159
F LG A+ F+ + + G +P L + I+ ++ A ++ +YGL+VA
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 160 IYLYTK 165
+ + K
Sbjct: 85 VIVSGK 90
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 190 bits (463), Expect = 4e-49
Identities = 96/157 (61%), Positives = 119/157 (75%), Gaps = 11/157 (7%)
Query: 7 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 66
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 67 GLVVAVLIAGALQEP-ANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGD 125
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI GD
Sbjct: 80 GLVVAVIVSGKVEPAGANYTI----------NNAFSQFAGGLVCGLCGLGAGYAIGIAGD 129
Query: 126 AGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
AGVR +QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 130 AGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 159
F LG A+ F+ + + G +P L + I+ ++ A ++ +YGL+VA
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 160 IYLYTK 165
+ + K
Sbjct: 85 VIVSGK 90
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 94.7 bits (225), Expect = 3e-20
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 15 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 74
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 75 AGALQEPANYPLYKLVSGSVVKYR----GFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 130
G L E L G + R G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 131 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 160
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 40.7 bits (91), Expect = 5e-04
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 102 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 157
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 158 VAIYLYTK 165
+A K
Sbjct: 109 MAFVFVGK 116
Score = 29.9 bits (64), Expect = 0.95
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 14 VMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVL 73
+ G + S L G+G A P L +K +I + A I ++G+++ ++
Sbjct: 145 IFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGIV 204
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 94.7 bits (225), Expect = 3e-20
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 15 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 74
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 75 AGALQEPANYPLYKLVSGSVVKYR----GFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 130
G L E L G + R G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 131 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 160
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 40.7 bits (91), Expect = 5e-04
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 102 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 157
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 158 VAIYLYTK 165
+A K
Sbjct: 109 MAFVFVGK 116
Score = 29.9 bits (64), Expect = 0.95
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 14 VMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVL 73
+ G + S L G+G A P L +K +I + A I ++G+++ ++
Sbjct: 145 IFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGIV 204
>U23515-3|AAU87817.1| 345|Caenorhabditis elegans Hypothetical
protein R144.6 protein.
Length = 345
Score = 29.1 bits (62), Expect = 1.7
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 17 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAG 76
A S+++F ++ SG GI +M +++ I+ G L ++ G
Sbjct: 11 ALSSVLFGSMFVPVKKCHSGNGIFVQWIMSTAILLVGIVVYSTQGFPEFEPL---AMLGG 67
Query: 77 ALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAV-GFSGLAAGFAIGIVGDAGVRGTA-QQ 134
+ L + + V I +G G+ V G + AG+A G G G+ T +
Sbjct: 68 M--------FWALGNATAVPIMNTIGIGMGMLVWGTTNCVAGWAAGRFGLFGINSTVPEY 119
Query: 135 PRL-FVGMILIL 145
P L + G++L++
Sbjct: 120 PFLNYFGLVLVV 131
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 102 HLGAGLA-VGFSGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGL 156
++GAG A VG +G AG IG V A V G A+ P +LF IL +E +GL+ L
Sbjct: 25 YIGAGAATVGVAGSGAG--IGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCL 82
Query: 157 IVAIYL 162
+ +
Sbjct: 83 TMGFMI 88
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 102 HLGAGLA-VGFSGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGL 156
++GAG A VG +G AG IG V A V G A+ P +LF IL +E +GL+ L
Sbjct: 25 YIGAGAATVGVAGSGAG--IGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCL 82
Query: 157 IVAIYL 162
+ +
Sbjct: 83 TMGFMI 88
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 102 HLGAGLA-VGFSGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGL 156
++GAG A VG +G AG IG V A V G A+ P +LF IL +E +GL+ L
Sbjct: 49 YIGAGAATVGVAGSGAG--IGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCL 106
Query: 157 IVAIYL 162
+ +
Sbjct: 107 TMGFMI 112
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 46 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 87
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical
protein C48B4.7 protein.
Length = 159
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Query: 133 QQPRLFVGMILILI-----FAEVLGLYGLIVAIYLY 163
Q+ +FV M+L+L+ F LG YG ++AI+ Y
Sbjct: 48 QEEIVFVAMVLLLVFTISSFVAFLGEYGTMMAIHYY 83
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 26.6 bits (56), Expect = 8.9
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 22 IFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP 81
IF L A+Y T K+ A ++++ P ++ + A L+ LIA L+EP
Sbjct: 593 IFEHLPASYKTTKNTFAAAEEMSESADILVPREEPKIIKCLAAC--LLHIRLIAKNLREP 650
Query: 82 ANYPLYKLVSGSVVKY 97
+Y V GS+V +
Sbjct: 651 LTEVVYCKVIGSLVSF 666
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 68 LVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLG 104
L+V +L+ G LQE +Y +Y ++S V+ + ++ G
Sbjct: 540 LIVNLLLEGYLQEDFHYTVYSVISYVVIGSKWRVYNG 576
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 68 LVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLG 104
L+V +L+ G LQE +Y +Y ++S V+ + ++ G
Sbjct: 563 LIVNLLLEGYLQEDFHYTVYSVISYVVIGSKWRVYNG 599
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.145 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,305,161
Number of Sequences: 27539
Number of extensions: 113409
Number of successful extensions: 370
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 327
Number of HSP's gapped (non-prelim): 27
length of query: 165
length of database: 12,573,161
effective HSP length: 76
effective length of query: 89
effective length of database: 10,480,197
effective search space: 932737533
effective search space used: 932737533
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -