Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001302-TA|BGIBMGA001302-PA|IPR000245|ATPase, V0 complex,
proteolipid subunit C,, IPR002379|ATPase, F0/V0 complex, subunit C,
IPR011555|ATPase, V0 complex, proteolipid subunit C, eukaryotic
(165 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 196 6e-51
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 196 6e-51
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 196 6e-51
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 196 6e-51
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 196 6e-51
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 95 3e-20
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 95 3e-20
At5g19600.1 68418.m02333 sulfate transporter, putative similar t... 31 0.51
At5g60660.1 68418.m07613 major intrinsic family protein / MIP fa... 30 0.90
At2g41190.1 68415.m05087 amino acid transporter family protein l... 29 1.6
At3g53780.2 68416.m05942 rhomboid family protein contains PFAM d... 29 2.1
At3g53780.1 68416.m05941 rhomboid family protein contains PFAM d... 29 2.1
At1g61790.1 68414.m06968 OST3/OST6 family protein weak similarit... 29 2.1
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 28 2.7
At3g61050.1 68416.m06832 calcium-dependent lipid-binding protein... 28 3.6
At5g38030.1 68418.m04581 MATE efflux family protein similar to r... 27 4.8
At4g09640.1 68417.m01584 expressed protein several hypothetical ... 27 4.8
At3g26590.1 68416.m03319 MATE efflux family protein similar to r... 27 6.3
At1g34470.1 68414.m04283 permease-related low similarity to puri... 27 8.4
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 196 bits (478), Expect = 6e-51
Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + A S + G+ HL +GLA G +GL+AG AIGIVGDAGVR
Sbjct: 71 IAVIISTGINPKAK---------SYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 196 bits (478), Expect = 6e-51
Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + A S + G+ HL +GLA G +GL+AG AIGIVGDAGVR
Sbjct: 71 IAVIISTGINPKAK---------SYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 196 bits (478), Expect = 6e-51
Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + A S + G+ HL +GLA G +GL+AG AIGIVGDAGVR
Sbjct: 71 IAVIISTGINPKAK---------SYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 196 bits (478), Expect = 6e-51
Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + A S + G+ HL +GLA G +GL+AG AIGIVGDAGVR
Sbjct: 73 IAVIISTGINPKAK---------SYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 124 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 159
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 196 bits (478), Expect = 6e-51
Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 9/156 (5%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 69
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 70 VAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 129
+AV+I+ + A S + G+ HL +GLA G +GL+AG AIGIVGDAGVR
Sbjct: 72 IAVIISTGINPKAK---------SYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122
Query: 130 GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 165
AQQP+LFVGMILILIFAE L LYGLIV I L ++
Sbjct: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 158
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 94.7 bits (225), Expect = 3e-20
Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 71
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 25 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 84
Query: 72 VLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131
+++ L+ + P K+ ++ G+ +G+ VGF+ L G +GI+G +
Sbjct: 85 IILQTKLE---SVPSSKMYDAESLR-AGYAIFASGIIVGFANLVCGLCVGIIGSSCALSD 140
Query: 132 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 141 AQNSTLFVKILVIEIFGSALGLFGVIVGIIM 171
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 159
F +G +++G S L A + I I G + + + PR+ ++ +IF E + +YG+IVA
Sbjct: 25 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 84
Query: 160 IYLYTK 165
I L TK
Sbjct: 85 IILQTK 90
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 94.7 bits (225), Expect = 3e-20
Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Query: 12 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 71
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 23 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 82
Query: 72 VLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGT 131
+++ L+ + P K+ ++ G+ +G+ VGF+ L G +GI+G +
Sbjct: 83 IILQTKLE---SVPSSKMYDAESLR-AGYAIFASGIIVGFANLVCGLCVGIIGSSCALSD 138
Query: 132 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 162
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 139 AQNSTLFVKILVIEIFGSALGLFGVIVGIIM 169
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 159
F +G +++G S L A + I I G + + + PR+ ++ +IF E + +YG+IVA
Sbjct: 23 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 82
Query: 160 IYLYTK 165
I L TK
Sbjct: 83 IILQTK 88
>At5g19600.1 68418.m02333 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain; supporting cDNA
gi|14141683|dbj|AB061739.1|
Length = 634
Score = 30.7 bits (66), Expect = 0.51
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 57 VVMAGIIAIY---GLVVAVLIAGALQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSG 113
VV+ G + Y G + G L++ N P +L++ KY G + AG+ G
Sbjct: 277 VVVVGCVVAYLVKGTAHGIATVGPLKKGLNPPSIQLLNFDS-KYLGMV-FKAGIVTGLIA 334
Query: 114 LAAGFAIG 121
LA G AIG
Sbjct: 335 LAEGIAIG 342
>At5g60660.1 68418.m07613 major intrinsic family protein / MIP
family protein similar to mipC protein GI:1657948 from
[Mesembryanthemum crystallinum]
Length = 291
Score = 29.9 bits (64), Expect = 0.90
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 78 LQEPANYPLYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGI-VGDAGVRGTAQQPR 136
++E +PLY+ V V F+++ +G+ A G+ G G+ G A
Sbjct: 29 MEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAW--- 85
Query: 137 LFVGMILILIF 147
F GMI +L++
Sbjct: 86 AFGGMIFVLVY 96
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 10 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPV--VMAGIIAIYG 67
PFFG+M A + S L A A I R ++I+ SII V++G + Y
Sbjct: 467 PFFGLMMALIGSLLSILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYS 526
Query: 68 LVVAVL 73
V ++
Sbjct: 527 SVAKII 532
>At3g53780.2 68416.m05942 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 394
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 86 LYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILIL 145
L L+SG + L + ++VG SG G G++ + + T ++ + L+L
Sbjct: 180 LLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVL 239
Query: 146 IFAEVLGL 153
I A LGL
Sbjct: 240 IVAVNLGL 247
>At3g53780.1 68416.m05941 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 270
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 86 LYKLVSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILIL 145
L L+SG + L + ++VG SG G G++ + + T ++ + L+L
Sbjct: 56 LLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVL 115
Query: 146 IFAEVLGL 153
I A LGL
Sbjct: 116 IVAVNLGL 123
>At1g61790.1 68414.m06968 OST3/OST6 family protein weak similarity
to SP|Q13454 N33 protein {Homo sapiens}; contains Pfam
profile PF04756: OST3 / OST6 family
Length = 346
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 100 FIHLGAGLAVGFSGLAAGFAIGIVG--DAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 157
F + G+G+ +G G A GF +VG A V + + LI++ A + + +
Sbjct: 264 FFYQGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNITAQRLIMLLALFISFWAVK 323
Query: 158 VAIYL 162
+YL
Sbjct: 324 KVVYL 328
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 124 GDAGV-RGTAQQPRLFVGMILILIF 147
G GV +G A QPRL V ++L++IF
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIF 291
>At3g61050.1 68416.m06832 calcium-dependent lipid-binding protein,
putative strong similarity to CLB1 [Lycopersicon
esculentum] GI:2789434; contains Pfam profile PF00168:
C2 domain
Length = 510
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 90 VSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVG 124
V GS + G + G G VG G G +G+VG
Sbjct: 418 VIGSTMDAVGMVGSGLGAGVGMVGTGIGTGVGLVG 452
>At5g38030.1 68418.m04581 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family; putative
multidrug efflux protein NorM - Vibrio parahaemolyticus,
EMBL:AB010463
Length = 498
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 3 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 58
EN+ I G FGVM + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVIAGFSFGVMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTAVILSLLYIF 147
Query: 59 MAGIIAIYGLVVAV 72
A I+A G A+
Sbjct: 148 AAPILAFIGQTPAI 161
>At4g09640.1 68417.m01584 expressed protein several hypothetical
proteins - Arabidopsis thaliana
Length = 386
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 90 VSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILI 146
V G V+ I +GA V GL A G+ +G +P ++GMI +++
Sbjct: 20 VKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITMIV 76
>At3g26590.1 68416.m03319 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 500
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 3 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 58
EN+ + G FG+M + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVVAGFSFGIMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTALILSLLYIF 147
Query: 59 MAGIIAIYGLVVAVLIAGAL 78
A I+A G A+ A +
Sbjct: 148 AAPILASIGQTAAISSAAGI 167
>At1g34470.1 68414.m04283 permease-related low similarity to purine
permease [Arabidopsis thaliana] GI:7620007
Length = 368
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 90 VSGSVVKYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILI 146
+ G V+ + +GA V GL A G+ +G +P +VGMI +++
Sbjct: 20 IKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIV 76
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.327 0.145 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,368,745
Number of Sequences: 28952
Number of extensions: 125529
Number of successful extensions: 448
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 412
Number of HSP's gapped (non-prelim): 22
length of query: 165
length of database: 12,070,560
effective HSP length: 76
effective length of query: 89
effective length of database: 9,870,208
effective search space: 878448512
effective search space used: 878448512
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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