Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001301-TA|BGIBMGA001301-PA|IPR002159|CD36 antigen
         (412 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   9.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   9.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   9.2  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 13/53 (24%), Positives = 24/53 (45%)

Query: 106 VGMINRALEQFFTNLTDPFQTVKVKDLFFDGLFLNCEGDNTALGLICGKIRAE 158
           V +++ AL   FT +TD  Q++       +  + N   D   L  +C ++  E
Sbjct: 234 VMLLSTALAYRFTQVTDRTQSMSESKNKSESAWKNLREDYNRLCRLCKRVDEE 286


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 13/53 (24%), Positives = 24/53 (45%)

Query: 106 VGMINRALEQFFTNLTDPFQTVKVKDLFFDGLFLNCEGDNTALGLICGKIRAE 158
           V +++ AL   FT +TD  Q++       +  + N   D   L  +C ++  E
Sbjct: 234 VMLLSTALAYRFTQVTDRTQSMSESKNKSESAWKNLREDYNRLCRLCKRVDEE 286


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 13/53 (24%), Positives = 24/53 (45%)

Query: 106 VGMINRALEQFFTNLTDPFQTVKVKDLFFDGLFLNCEGDNTALGLICGKIRAE 158
           V +++ AL   FT +TD  Q++       +  + N   D   L  +C ++  E
Sbjct: 234 VMLLSTALAYRFTQVTDRTQSMSESKNKSESAWKNLREDYNRLCRLCKRVDEE 286


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.138    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,641
Number of Sequences: 317
Number of extensions: 4241
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 412
length of database: 114,650
effective HSP length: 58
effective length of query: 354
effective length of database: 96,264
effective search space: 34077456
effective search space used: 34077456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)