Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001301-TA|BGIBMGA001301-PA|IPR002159|CD36 antigen
(412 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38947| Best HMM Match : CD36 (HMM E-Value=1.4e-15) 97 2e-20
SB_47539| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 4e-20
SB_27136| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 6e-06
SB_50699| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7098| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_8108| Best HMM Match : GST_N (HMM E-Value=3.9e-14) 29 5.2
SB_5694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.1
SB_5571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.1
>SB_38947| Best HMM Match : CD36 (HMM E-Value=1.4e-15)
Length = 314
Score = 97.1 bits (231), Expect = 2e-20
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 29/261 (11%)
Query: 2 YDKWVKLPMPLDFKIYVFNVTNRDAINQGEKPNLKEIGPYVYKQYREKIILGYGDNDT-I 60
Y +W+ +P+ ++YVF+V N D + G P ++E+GPY Y++Y K + + ++T +
Sbjct: 52 YKQWIFPTVPIHIELYVFHVVNPDEVRSGATPVIRELGPYTYREYLLKENITFNQDETLV 111
Query: 61 KYNLKKTFVFDP--VASGDLREDDELTVINFSYMAAIISVQEMMPAAVGMINRALEQFFT 118
YN KK +VF P SG E D +T +N +Y A + V + V + AL ++
Sbjct: 112 SYNQKKWYVFTPELSCSGCDPEADSVTTVNIAY-AIMTEVAKSYSRIVRVGIDALLKY-- 168
Query: 119 NLTDPFQTVKVKDLFF---DGLFLNCEGDNTALGLICGKIRAEKPPTMRISKSANGFYFS 175
F T V+++ + D LF L K E P + +
Sbjct: 169 EKEHLFMTRTVREVLWGYDDPLFAEFSKLKDMFNL---KFLPEISPLITM---------- 215
Query: 176 MFSHMNRTVSGPYEMVRGTENLSDLGHVISYQGKRIMSAWDDQYCGQLNGTDSTIFPPLE 235
N T G + GT+N+ I+++G+ M W+ Y +NG+D T FPP
Sbjct: 216 ---EYNETYDGISTVNTGTKNMDRTLDWIAWKGQSSMGLWNSSYANMINGSDGTQFPP-- 270
Query: 236 DGNIP-EKLYTFEPDICRSLF 255
G+ P + LY F ++CRS++
Sbjct: 271 -GSGPGDTLYFFSTNLCRSIY 290
>SB_47539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 96.3 bits (229), Expect = 4e-20
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 2 YDKWVKLPMPLDFKIYVFNVTNRDAINQGEKPNLKEIGPYVYKQYREKIILGYGD-NDTI 60
+ +W + P+P+ + ++FNV N G + + GPY Y++YR K + + N T+
Sbjct: 59 FKQWKEPPIPIYLQFFIFNVVNEMEAKNGSPLVVAQQGPYSYREYRRKENITWCKMNSTV 118
Query: 61 KYNLKKTFVFDPVASGDLREDDELTVINFSYMAAIISVQEMMPAAVGMINRALEQFFTNL 120
YN K+ FVFDP S + + Y + +V + G++ NL
Sbjct: 119 TYNEKQWFVFDPATSCNTCDP---------YKDVVTTVNVPLVTLAGVLK--------NL 161
Query: 121 TDPFQTVKVKDLFFDGLFLNCEGDNTALGLICGKIRAEKPPTMRISKSANGFYFS----- 175
D F ++ L FD T ++ G M+ ++ + F+ S
Sbjct: 162 KDTFHWKELVTLLFDEFSETLFEKRTVHEMLWGY---NDTMLMKYNEYRDKFHLSGILPA 218
Query: 176 ----MFSHMNRTVSGPYEMVRGTENLSDLGHVISYQGKRIMSAWDDQYCGQLNGTDSTIF 231
+ N T G + G ++++ + ++GK + W+ Y +NGTD T F
Sbjct: 219 INPTIALQKNNTYQGLTSVSTGVKDINSIVEWQEWKGKHSLGVWNSSYANMINGTDGTQF 278
Query: 232 PPLEDGNIPEKLYTFEPDICRSLFASLVGKDTLFNISTYYYEISDMTLGSKSANPDNKCF 291
P + + L+ F +CRSLF + T+ I TY + + S N +N F
Sbjct: 279 SP--GISTDDTLFVFVTQLCRSLFLTYDKSTTIHGIDTYQFTTPSSLYLNASLNGNNAAF 336
Query: 292 C--KRYITGVV 300
C K Y TG++
Sbjct: 337 CTKKCYPTGIL 347
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 298 GVVIKGVKRLQFNIELRNVPSVPQLKEVPSGLFPLLWIEEGAEI 341
G+ + KRLQ NI + V + Q + + S P+L+I E A I
Sbjct: 400 GIPLSSGKRLQINIFIEPVEDIKQTQGLGSLFLPILYINETATI 443
>SB_27136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 49.2 bits (112), Expect = 6e-06
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 36 KEIGPYVYKQYREKIILGYGDNDTIKYN--LKKTFVFDPVASG--DLREDDELTVINFSY 91
+E GPYVYK EKI + + DN + Y ++TF D A +E D++TV+N Y
Sbjct: 671 EERGPYVYKTTTEKIDVSFDDNGHVTYKKYSQQTFDADATAQACPQCKESDQMTVLNLGY 730
Query: 92 MAAIISVQEMMPAAVGMI 109
+ A+ M A+ M+
Sbjct: 731 LGAVAQAGGDMGIALAMV 748
>SB_50699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 17 YVFNVTN-RDAINQGEKPNLKEIGPYVYKQYREKIILGY-GDNDTIKYNLKKTFVFDPVA 74
+VF++ N + +N E P + E GPY YK+ R IL Y D + + +TF+FDP
Sbjct: 4 FVFDLQNPAEVMNGSELPYVIERGPYSYKETRSVDILNYSADKSIVTFMPNRTFIFDPET 63
Query: 75 S 75
S
Sbjct: 64 S 64
>SB_7098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 33.5 bits (73), Expect = 0.32
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 297 TGVVIKGVKRLQFNIELRNVPSVPQLKEVPSGLFPLLWIEEGAEIPE 343
TG+ ++ + RLQ N+ +++VP + + +P P++ A + +
Sbjct: 77 TGIPLQALIRLQINVFIQSVPGISETTGIPQAFVPVMHFSNNASVDD 123
>SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 178 SHMNRTVSGPYEMVRGTENLSDLGHVISY 206
SH+ + +SG +V+G +L DL HV+ Y
Sbjct: 303 SHLIKLISGELPVVQGQPDLLDLAHVVLY 331
>SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 44 KQYREKIILGYGDNDTIKYNLKKTFVFDPVASGDLREDDE 83
K Y +ILG +N T K K+ ++PV GD + +E
Sbjct: 29 KGYTIDMILGNRENSTAKREEKRPVEYNPVGQGDTSDTEE 68
>SB_8108| Best HMM Match : GST_N (HMM E-Value=3.9e-14)
Length = 238
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 302 KGVKRLQFNIELRNVPSVPQLKEVPSGLFPLLWIEEGAEIPEWL 345
KGV NI L+N P + P GL P++ + +G +PE L
Sbjct: 40 KGVDYECININLKNKPDWYLAEPNPRGLVPMIEMPDGRLLPESL 83
>SB_5694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1113
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 155 IRAEKPPTMRISKSANGFYFSMFSHMNRTVSGPYEMV 191
+R +KP RI SH +T SGPY+++
Sbjct: 35 VRLQKPGETRIPTVNESDVMRFLSHQKQTASGPYQLL 71
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 180 MNRTVSGPYEMVRGTENLSDLGHVISYQGKRIMSA 214
MN T GP E + GT NL+ G + +G ++ A
Sbjct: 1 MNFTTLGPSEFLNGTSNLTTNGSALGPEGMAMLLA 35
>SB_5571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 79 REDDELTVINFSYMAAIISVQEMMPAAVGMINRALEQFFTNLTDPFQTVKVKDLFFDGLF 138
RE T+ + +A + +V + VG INRA + T DP T K+ + F
Sbjct: 354 REHQITTIASLPPIATLPAVHHTAESIVGTINRAESKILTAKLDPL-TGKIALMSKGVAF 412
Query: 139 LNCE 142
LN E
Sbjct: 413 LNAE 416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.138 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,399,028
Number of Sequences: 59808
Number of extensions: 551062
Number of successful extensions: 959
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 940
Number of HSP's gapped (non-prelim): 14
length of query: 412
length of database: 16,821,457
effective HSP length: 84
effective length of query: 328
effective length of database: 11,797,585
effective search space: 3869607880
effective search space used: 3869607880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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