Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001300-TA|BGIBMGA001300-PA|IPR000276|Rhodopsin-like GPCR
superfamily, IPR009126|Cholecystokinin receptor
(280 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 87 2e-19
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 86 3e-19
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 86 3e-19
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 84 2e-18
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 83 2e-18
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 81 1e-17
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 79 6e-17
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 77 2e-16
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 73 2e-15
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 69 4e-14
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 67 2e-13
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 66 3e-13
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 66 4e-13
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 56 4e-10
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 56 4e-10
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 52 4e-09
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 29 0.035
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.7
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 86.6 bits (205), Expect = 2e-19
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRF 108
Y VIF+ + GN +A N+ M T TN YL +LA+SD LL + LP + I+ F
Sbjct: 60 YAVIFVTGLVGNVSTCVVIARNKSMHTATNYYLFSLAVSDLLLLISGLPPEIY-YIWSHF 118
Query: 109 --LFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMV 166
+FG C + F S + V T+ A ++ERY AIC P S A K I ++
Sbjct: 119 PYVFGEAFCIIQSFAAETSANATVLTITAFTVERYIAICHPFISHTMSKLSRAVKFIIVI 178
Query: 167 WILSLILNSP 176
W+L+L L P
Sbjct: 179 WLLALCLAVP 188
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 86.2 bits (204), Expect = 3e-19
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLP--FTLVGQIYR 106
Y +IF+ I GN + N M+T TN YL +LAISD +L V LP +L Q Y
Sbjct: 47 YMIIFVTGIFGNITTCTVIIKNPAMQTATNYYLFSLAISDLILLVLGLPNELSLFWQQY- 105
Query: 107 RFLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMV 166
++ G LCK+ ++ +S V V T+VA S+ERY AIC PL+ + I
Sbjct: 106 PWVLGVSLCKIRAYVSEMSSYVSVLTIVAFSMERYLAICHPLRVYTISGLKRPIRFILAA 165
Query: 167 WILSLILNSPIML 179
W+++LI P +
Sbjct: 166 WLIALISAIPFAI 178
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 86.2 bits (204), Expect = 3e-19
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 31 ASVAKPNNAYEWRFILPPYFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFL 90
A V + +A W ++ ++ L++ GN LVI + R ++TVTN ++++LA++D L
Sbjct: 177 ADVDEKTDANSWWALI--LVIVPCLTLFGNVLVILAVVRERALQTVTNYFIVSLAVADLL 234
Query: 91 LGVFCLPFTLVGQIYRRFLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKS 150
+ V +PF + + + +C + + ++ LVAIS++RY A+ +P+K
Sbjct: 235 VAVLVMPFAVYVLVNGSWSLPGFVCDFYIAMDVTCSTSSIFNLVAISIDRYIAVTQPIKY 294
Query: 151 RKWQTQCHAYKMIAMVWILSLILNSPIMLVSTLQPMRGNDQ 191
K + + I +VW +S + SPI+L P R DQ
Sbjct: 295 AKHKNNRRVWLTILLVWAISAAIGSPIVLGLNNTPDRTPDQ 335
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 83.8 bits (198), Expect = 2e-18
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTL-VGQIYRR 107
Y VIF+ GN + + N M+T TN YL NLA+SD L + LPF L V
Sbjct: 40 YVVIFVTGFVGNIITCIVIWRNPSMQTPTNYYLFNLAVSDLLFLILGLPFELSVFWQQYP 99
Query: 108 FLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVW 167
+ +G G+CKL ++ S V V T+VA S+ERY AI PL+ + + A + I W
Sbjct: 100 WQWGLGICKLRAYVSETSSYVSVLTIVAFSIERYLAIYHPLRHYRSGLK-RAIRSIFGAW 158
Query: 168 ILSLILNSPIMLVSTLQPMRGNDQNTSSGTPQERECSIRK 207
+++LI P + + QN+ + + C++ K
Sbjct: 159 LIALIFAMPFATYVDINYVE-YPQNSKRNSEESAICAMLK 197
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 83.4 bits (197), Expect = 2e-18
Identities = 37/126 (29%), Positives = 75/126 (59%)
Query: 51 VIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRFLF 110
++ ++ + GN LVI + ++R VTN+++++LA++D ++G+ LPF+ ++++ ++F
Sbjct: 74 IVNVMVVLGNVLVILAVYHTSKLRNVTNMFIVSLAVADLMVGLAVLPFSATWEVFKVWIF 133
Query: 111 GAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVWILS 170
G C + + + + L AISL+RY A+ RP+ + + A ++A VWILS
Sbjct: 134 GDLWCSIWLAVDVWMCTASILNLCAISLDRYLAVTRPVSYPQIMSPRRARLLVATVWILS 193
Query: 171 LILNSP 176
++ P
Sbjct: 194 FVICFP 199
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 80.6 bits (190), Expect = 1e-17
Identities = 40/125 (32%), Positives = 72/125 (57%)
Query: 52 IFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRFLFG 111
+ L ++ GN LVI ++ + R +R V N ++++LA++D + + +PF + + +++FG
Sbjct: 46 LVLATVLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFG 105
Query: 112 AGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVWILSL 171
LCKL + + + L AI+L+RY+AI P+ + +T IA VWILS
Sbjct: 106 IHLCKLWLTCDVLCCTASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWILSG 165
Query: 172 ILNSP 176
++SP
Sbjct: 166 AISSP 170
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 78.6 bits (185), Expect = 6e-17
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRF 108
+ ++ LS+ GN LV + ++R +R + N++L +LAI+D +G + F V + +
Sbjct: 32 FLILIFLSVAGNILVCVAIYTDRGLRRIGNLFLASLAIADLFVGCLVMTFAGVNDLLGYW 91
Query: 109 LFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVWI 168
+FG C + + + L AISL+RY I PL+ +W T+ A IA+VW+
Sbjct: 92 VFGPRFCDTWIAFDVMCSTASILNLCAISLDRYIHIKDPLRYGRWVTRRIAVAGIAVVWL 151
Query: 169 LS-LILNSPIML 179
L+ LI PI L
Sbjct: 152 LAGLISFVPISL 163
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 76.6 bits (180), Expect = 2e-16
Identities = 44/133 (33%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIY-RR 107
+ ++ +++I GN LVIA + + RR+R+VTN ++ +LA +D L+G+ +P ++ Q+
Sbjct: 44 FTMLIIVTIVGNTLVIAAVITTRRLRSVTNCFVSSLAAADLLVGLAVMPPAVLLQLTGGT 103
Query: 108 FLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPL-KSRKWQTQCHAYKMIAMV 166
+ G LC L + + + +L AIS++RY A+ +PL SR+ +++ A MI V
Sbjct: 104 WELGPMLCDSWVSLDILLCTASILSLCAISIDRYLAVTQPLIYSRRRRSKRLAGLMIVAV 163
Query: 167 WILSLILNSPIML 179
W+L+ + SP +L
Sbjct: 164 WVLAGAITSPPLL 176
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 73.3 bits (172), Expect = 2e-15
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 50 FVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIY-RRF 108
F+ + ++ GN LVI + R + T TN ++ +LA +D L+G+ +PF+ + ++ R+
Sbjct: 53 FLFSVATVFGNTLVILAVVRERYLHTATNYFVTSLAFADCLVGLVVMPFSAIYEVLENRW 112
Query: 109 LFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVWI 168
LF C + L + + + L ISL+RY+AI P ++ A +IA+VWI
Sbjct: 113 LFTTDWCDVWRSLDVLFSTASILNLCVISLDRYWAITDPFTYPSKMSRRRAAVLIAIVWI 172
Query: 169 LSLILNSPIML 179
S ++ P ++
Sbjct: 173 CSSAISFPAIV 183
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 69.3 bits (162), Expect = 4e-14
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 42 WRFILPPYFVIFLL---SICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCL-P 97
W IL FVI +L S+ GN +V+ S + +RT +N++++NLAISDFL+ +FC+ P
Sbjct: 17 WHGILG--FVIGMLGFVSVMGNGMVVYIFLSTKSLRTPSNLFVINLAISDFLM-MFCMSP 73
Query: 98 FTLVGQIYRRFLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQC 157
++ Y ++ G C++ L ++ +WT+ I+ +RY I + L +
Sbjct: 74 PMVINCYYETWVLGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSGKPLSING 133
Query: 158 HAYKMIAMVWILSL 171
++IA +W+ SL
Sbjct: 134 ALIRIIA-IWLFSL 146
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 66.9 bits (156), Expect = 2e-13
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRM-RTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRR 107
Y V+ ++S GN V+ + +R+ ++ ++ L++LAI+D L+ +P + I
Sbjct: 44 YSVLMIISAIGNTTVLILITCRKRVSKSRIHIMLMHLAIADLLVTFLMMPLEIGWAITVS 103
Query: 108 FLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVW 167
+ G +C+++ F + + + + LV IS++RY+A+ +PL + W M++ W
Sbjct: 104 WKAGDVMCRIMAFFRMFGLYLSSFVLVCISMDRYYAVIKPL--QLWDVDKRGKIMLSFAW 161
Query: 168 ILSLILNSPIMLVSTLQ 184
I S++ + P +V L+
Sbjct: 162 IGSVVCSLPQTIVFHLE 178
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 66.1 bits (154), Expect = 3e-13
Identities = 35/129 (27%), Positives = 68/129 (52%)
Query: 52 IFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRFLFG 111
I + ++ GN LV + R++R N L++LA+SD + + +P L+ +I + FG
Sbjct: 51 IIVGTVIGNILVCVAVFLVRKLRRPCNYLLVSLAVSDLCVALLVMPMALLYEISGNWSFG 110
Query: 112 AGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVWILSL 171
+C L +S + + L IS++R+ AI +PLK +T +++VW+ +
Sbjct: 111 TIMCDLWVSFDVLSCTASILNLCMISVDRFCAITKPLKYGVKRTPRRMIVYVSLVWLGAA 170
Query: 172 ILNSPIMLV 180
++ P +L+
Sbjct: 171 CISLPPLLI 179
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 65.7 bits (153), Expect = 4e-13
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 42 WRFILPPYFVIFLL---SICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCL-P 97
W IL FVI +L S GN +V+ S + +RT +N++++NLAIS+FL+ +FC+ P
Sbjct: 51 WHGILG--FVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLM-MFCMSP 107
Query: 98 FTLVGQIYRRFLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQC 157
++ Y ++ G C++ L ++ +WT+ I+ +RY I + L +
Sbjct: 108 PMVINCYYETWVLGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSGKPLSING 167
Query: 158 HAYKMIAMVWILSL 171
++IA +W+ SL
Sbjct: 168 ALIRIIA-IWLFSL 180
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 56.0 bits (129), Expect = 4e-10
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRF 108
Y ++ ++S+ GNC VI ++++ +RT +N+++++LAI D ++ F +P ++ R
Sbjct: 64 YSMLLIMSLVGNCCVIWIFSTSKSLRTPSNMFIVSLAIFDIIM-AFEMPMLVISSFMERM 122
Query: 109 LFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVW 167
+ C + ++S T AI+ +RY I P+ R Q A +IA W
Sbjct: 123 IGWEIGCDVYSVFGSISGMGQAMTNAAIAFDRYRTISCPIDGRLNSKQ--AAVIIAFTW 179
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 56.0 bits (129), Expect = 4e-10
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 49 YFVIFLLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVGQIYRRF 108
Y ++ ++S+ GNC VI ++++ +RT +N+++++LAI D ++ F +P ++ R
Sbjct: 64 YSMLLIMSLVGNCCVIWIFSTSKSLRTPSNMFIVSLAIFDIIM-AFEMPMLVISSFMERM 122
Query: 109 LFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVW 167
+ C + ++S T AI+ +RY I P+ R Q A +IA W
Sbjct: 123 IGWEIGCDVYSVFGSISGMGQAMTNAAIAFDRYRTISCPIDGRLNSKQ--AAVIIAFTW 179
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 52.4 bits (120), Expect = 4e-09
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 44 FILPPYFVIF-LLSICGNCLVIATLASNRRMRTVTNVYLLNLAISDFLLGVFCLPFTLVG 102
++L +++F L++ GN LVI + + +RT +N++++NLAI DF + + P +
Sbjct: 49 YLLALLYILFTFLALLGNGLVIWIFCAAKSLRTPSNMFVVNLAICDFFM-MIKTPIFIYN 107
Query: 103 QIYRRFLFGAGLCKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKM 162
F G C++ + +++ T AI+ +RY I RPL + + Q +
Sbjct: 108 SFNTGFALGNLGCQIFAVIGSLTGIGAAITNAAIAYDRYSTIARPLDGKLSRGQVILF-- 165
Query: 163 IAMVWILSL 171
I ++W ++
Sbjct: 166 IVLIWTYTI 174
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 29.5 bits (63), Expect = 0.035
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 115 CKLIPFLQAVSVSVDVWTLVAISLERYFAICRPLKSRKWQTQCHAYKMIAMVWILSL 171
C++ L ++ +WT+ I+ +RY I + L + ++IA +W+ SL
Sbjct: 1 CQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSGKPLSINGALIRIIA-IWLFSL 56
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 228 SYVLAHVAQFDSRLITWHLLAEIQHQNLNNLLIRGHPALACK 269
+Y + H F LI H I N L+R H L+C+
Sbjct: 147 TYFIMH-GDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 187
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 228 SYVLAHVAQFDSRLITWHLLAEIQHQNLNNLLIRGHPALACK 269
+Y + H F LI H I N L+R H L+C+
Sbjct: 147 TYFIMH-GDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 187
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 228 SYVLAHVAQFDSRLITWHLLAEIQHQNLNNLLIRGHPALACK 269
+Y + H F LI H I N L+R H L+C+
Sbjct: 198 TYFIMH-GDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 238
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 228 SYVLAHVAQFDSRLITWHLLAEIQHQNLNNLLIRGHPALACK 269
+Y + H F LI H I N L+R H L+C+
Sbjct: 147 TYFIMH-GDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 187
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.327 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,687
Number of Sequences: 429
Number of extensions: 3218
Number of successful extensions: 39
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 23
length of query: 280
length of database: 140,377
effective HSP length: 57
effective length of query: 223
effective length of database: 115,924
effective search space: 25851052
effective search space used: 25851052
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)
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