Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001299-TA|BGIBMGA001299-PA|IPR013057|Amino acid
transporter, transmembrane
         (429 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   4.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   5.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   7.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   7.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.3  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory
          receptor candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 31 KNSGLVAGVIGTILAGFVCTHTVHILVKTSQQIC 64
          +   +VA V+GTI+  F C   +  ++   QQ C
Sbjct: 60 ETKSIVAMVMGTIVNAFSCYTVLAPVLCKRQQYC 93


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 15/64 (23%), Positives = 29/64 (45%)

Query: 118 FIGSSLKEALDVYMPGYQLSIQAYCALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFA 177
           ++G    E LD    G +L+  A C+  L  +++ C     K    F+ ++ +L  L+  
Sbjct: 695 YVGVHSSELLDFLKSGNRLARPANCSPDLYAVMLNCWKECPKNRPTFTELSKSLEGLLEN 754

Query: 178 ITLY 181
           +  Y
Sbjct: 755 VAQY 758


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 158 LKYLVPFSAIANALIFLVFAITLYYMFFDLPP 189
           ++ L P ++ AN +I+ +F+         LPP
Sbjct: 292 IQSLAPLNSAANPIIYCLFSTHFCRTLGSLPP 323


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/39 (20%), Positives = 21/39 (53%)

Query: 173 FLVFAITLYYMFFDLPPVSDRVMVANVSTWPLFLSTVIF 211
           + ++  T+YY+++ +   S       ++ + +F ST I+
Sbjct: 149 YFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIY 187


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 145 SLVPLVVVCQIRNLKYLVPFSAIANALIFLV 175
           +L P  ++ QIR + ++  F  IAN ++  V
Sbjct: 62  ALSPFELI-QIRTINFVATFRTIANIILMAV 91


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.141    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,142
Number of Sequences: 317
Number of extensions: 3712
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 6
length of query: 429
length of database: 114,650
effective HSP length: 59
effective length of query: 370
effective length of database: 95,947
effective search space: 35500390
effective search space used: 35500390
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 44 (21.8 bits)