Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001299-TA|BGIBMGA001299-PA|IPR013057|Amino acid
transporter, transmembrane
(429 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08) 122 7e-28
SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05) 100 2e-21
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-12
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 3e-11
SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-10
SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-09
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 56 4e-08
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35) 52 1e-06
SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35) 50 5e-06
SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 5e-06
SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40) 44 3e-04
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 6e-04
SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 36 0.063
SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4) 36 0.063
SB_43974| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.15
SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018) 34 0.26
SB_55970| Best HMM Match : Ion_trans_2 (HMM E-Value=8.7e-12) 32 1.0
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02) 29 7.3
>SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08)
Length = 373
Score = 122 bits (293), Expect = 7e-28
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 11/268 (4%)
Query: 100 VDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSIQAYCALSLVPLVVVCQIRNLK 159
++ L +T +Y +F+ SL++A D Y ++L ++ + + LVP++++ IR LK
Sbjct: 94 INIFLLITMFGFCAIYFLFVAESLQQAFDAYT-SFKLDVKLWVLIILVPVILLSFIRTLK 152
Query: 160 YLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRVMVANVSTWPLFLSTVIFAMEGIGVV 219
L S+++N L L Y + S + + T PL V+F EGIGV+
Sbjct: 153 ILAVLSSVSNVLALFGTVCVLSYAGSTVHDPST-LPLTQWKTLPLAFGAVVFTYEGIGVI 211
Query: 220 MPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDEII 279
+PVEN MA PRRF VL M +V L +GS+TLNLP
Sbjct: 212 LPVENMMAIPRRF---RWVLYAGMSLVTLLYLLMGVLGYLSCGTSCQGSITLNLPNTPFY 268
Query: 280 AQSAKLIMAFVIYLTYALQFYVPMEIITRMLATRKSNSYENLIQITIRTCLV--TLTVAI 337
S KLI+A I+LTY +QFYV I+ + R + L+ I R LV T T
Sbjct: 269 -MSVKLIIAASIFLTYFIQFYVITSILFPFVKGRVRQTIAPLVDIAFRMLLVCFTATFCY 327
Query: 338 GAAFPNLELV--IG-LVGAIFFSTLGLF 362
+ L L+ IG +V +F S +G +
Sbjct: 328 DKSLSTLSLIKDIGIIVIGVFGSVIGFY 355
>SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05)
Length = 332
Score = 100 bits (240), Expect = 2e-21
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 218 VVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDE 277
+V+PVEN M PR F VLN +M +V+ L KGS TLNLP D
Sbjct: 134 LVLPVENMMRTPRDFTW---VLNLAMSVVVILYLVVGTMGYISCAAMCKGSFTLNLP-DT 189
Query: 278 IIAQSAKLIMAFVIYLTYALQFYVPMEIITRMLATRKSNSYENLIQITIRTCLVTLTVAI 337
+ KL++A ++LTY LQFYVP+EI+ + R S Y+ + + RT LV +TV +
Sbjct: 190 PFYTTLKLLIAGSMFLTYFLQFYVPVEILLPSVLKRVSKKYQTVADLGFRTSLVLVTVVL 249
Query: 338 GAAFPNLELVIGLVGAIFFSTLGLFIPVAVQTIYLWEKDFGRFNYILWKNXXXXXXXXXX 397
A P LE VI ++G++ +TL + P A+ L + Y+L K+
Sbjct: 250 AACVPRLEDVIAVIGSLASTTLCMTFPAAMDIASLRMSSKLTW-YLLLKDIVIILIGITG 308
Query: 398 LVSGAYVSI 406
V+G Y+S+
Sbjct: 309 SVTGLYMSM 317
Score = 35.1 bits (77), Expect = 0.11
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 17/237 (7%)
Query: 1 MNFANRTLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTIL---AGFVCTHTVHILV 57
M+ + S++HL+K C+G G+ MP A +GL+ + ++ F + + V
Sbjct: 99 MSNTTTSFTSLMHLIKGCVGIGVYGMPLAVAYAGLLVLPVENMMRTPRDFTWVLNLAMSV 158
Query: 58 KTSQQICVEAKRPSLSFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYV- 116
+ V +S A C +F ++ ++ + S+ +TY V V
Sbjct: 159 VVILYLVV-GTMGYISCAAMCKGSFTLNLPDTPFYT-TLKLLIAGSMFLTYFLQFYVPVE 216
Query: 117 VFIGSSLKEALDVYMPGYQLSIQAYCALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVF 176
+ + S LK Y L + +L LV +V+ + L+ ++ A+ +L
Sbjct: 217 ILLPSVLKRVSKKYQTVADLGFRT--SLVLVTVVLAACVPRLEDVI---AVIGSL----- 266
Query: 177 AITLYYMFFDLPPVSDRVMVANVSTWPLFLSTVIFAMEGI-GVVMPVENEMANPRRF 232
A T M F + +++ TW L L ++ + GI G V + MA RF
Sbjct: 267 ASTTLCMTFPAAMDIASLRMSSKLTWYLLLKDIVIILIGITGSVTGLYMSMAKLIRF 323
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 70.5 bits (165), Expect = 2e-12
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 144 LSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRVMVANVSTWP 203
+ +VPL+++ IR ++ L P S I+N + F L YM + + + + ST+P
Sbjct: 526 IPVVPLILMAFIRRVRKLGPVSFISNLALLFAFLAVLGYMLTGWTFKLNEIRLFSWSTFP 585
Query: 204 LFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXXD 263
+F V A +GIG ++P+E+ MA R P L+ ++ ++ + +
Sbjct: 586 VFFGQVTSAYQGIGTLIPIESSMAENRH--RYPLYLHLALGLLSAILGGFGITGYLVYGE 643
Query: 264 DVKGSVTLNLPQDEIIAQSAKLIMAFVIYLTYALQFYVPMEIITRML----ATRKSNSYE 319
+V VT LPQ ++ ++++ I TY LQ + EII L RK YE
Sbjct: 644 NVDQIVTSELPQG-LLVTVVQILLCLAILFTYPLQLFPVTEIIESYLFKEYNRRKEEKYE 702
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 66.9 bits (156), Expect = 3e-11
Identities = 85/361 (23%), Positives = 160/361 (44%), Gaps = 33/361 (9%)
Query: 22 GILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEA---KRPSLSFAETC 78
G+L +P A G A + +L G + +T +L+ ++ ++ KR S+AE
Sbjct: 167 GVLGIPFAVSQGGFAALAV-IVLVGLMTLYTGVVLIDCMYEVSPKSRLRKRVRGSYAEI- 224
Query: 79 GAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYV-VFIGSSLKEALDVYMP-GYQL 136
AA +GP G I VD+ ++V + CV + + +G+++ L +M G+ L
Sbjct: 225 -AADAWGPV-----GGVI---VDF-MTVAFCYCTCVVLFMMLGNTVFSFLKSFMTLGFGL 274
Query: 137 SIQAY--CALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRV 194
+ + Y CA LVPLV++ Q+ L +L + ++ LI +F I Y + +
Sbjct: 275 N-ECYLICAALLVPLVLIHQLTVLAWLSMLAVLS--LITCLFIIIGYSLQEWQSWKIHNI 331
Query: 195 MVANVSTWPLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXX 254
+++ +P+ + ++F+ G V +E+ M PR+F + TS V
Sbjct: 332 PDFDINNFPVAIGIIVFSYCGHSVFPGIESSMRKPRKF---KKIACTSFTSVTLCKVAIG 388
Query: 255 XXXXXXXXDDVKGSVTLNLPQD--EIIAQSAKLIMAFV-IYLTYALQFYVPME----IIT 307
+TLN+ + ++ +S + V Y ++ L +V E I
Sbjct: 389 LLCCLLYGPHTLPLITLNIQSEAKNVVMRSFMAVFIIVNTYFSFPLNIFVASETLDLIAL 448
Query: 308 RMLATRKSNSYENLI-QITIRTCLVTLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIPVA 366
L + N + I ++ RT LV T I A P+L L++ + G++ + + +P A
Sbjct: 449 PKLPSCSVNKLKRAIWKLLTRTTLVLSTCGIAVAIPHLGLLMSIFGSLLGACISFILPCA 508
Query: 367 V 367
+
Sbjct: 509 L 509
>SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 62.1 bits (144), Expect = 8e-10
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 136 LSIQAYCALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRVM 195
L + + + LVP++++ I +L+ L S +AN + IT Y+ + V + +
Sbjct: 112 LDPKIWIVILLVPVILLSYIHSLRVLSVLSTMANICCLIGLVITFQYLGRN---VHNPKL 168
Query: 196 VANVSTW---PLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITL 249
+ W PLF V+F EGIGVV+P+EN+MA P+ F VLN M I++ +
Sbjct: 169 LPEFDGWAALPLFFGMVVFTFEGIGVVLPLENQMARPQHF---RLVLNVGMGIILAI 222
Score = 44.4 bits (100), Expect = 2e-04
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 297 LQFYVPMEIITRMLATRKSNSYENLIQITIRTCLVTLTVAIGAAFPNLELVIGLVGAIFF 356
L F PMEI+ + + + RT LV +T A+ P L I LVG+I
Sbjct: 232 LAFLRPMEIMQPPIRQCVGERFHGIADYGFRTLLVCVTCALALGIPQLSNFISLVGSIGS 291
Query: 357 STLGLFIPVAVQTIYLWEKDFGRFNYILWKNXXXXXXXXXXLVSGAYVSIDGIL 410
S L L P+ + + L+ + I+ K+ V G Y SI I+
Sbjct: 292 SALALVFPITIHLLTLYSTHQLTISVII-KDVFILAFGLLGSVVGLYTSILNIV 344
Score = 35.1 bits (77), Expect = 0.11
Identities = 13/28 (46%), Positives = 23/28 (82%)
Query: 10 SILHLLKSCLGSGILAMPAAFKNSGLVA 37
++ H+LK+ +G G+L++PAA N+G+VA
Sbjct: 78 TLTHILKANIGPGMLSLPAAMMNAGIVA 105
>SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 61.7 bits (143), Expect = 1e-09
Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 28/352 (7%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQ-ICVEAKRPSLSFAETC 78
G+G LA+P A GL AG + G + +T ++L++ + + KR S+ +
Sbjct: 3 GTGFLALPYAVARGGL-AGALSFAFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 61
Query: 79 GAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSI 138
AA++ P +G V L + +L+++ Y+V + SSL +DV +PG L+
Sbjct: 62 QAAWL--P------AGGT---VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQ 107
Query: 139 QAYCALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRVMVAN 198
++ AL+ V + ++LK + S I+N + + F I L + R +
Sbjct: 108 SSWAALAGVCVFPALFCKSLKSMAWVSCISNITLIISFIIVLISEVSNYAAWDFRTLFFW 167
Query: 199 VSTWPLF-LSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXX 257
+ LF ++ ++F+ VV+ +E M + RF + ++ V TL
Sbjct: 168 DTRGVLFSINIIVFSYSIQAVVIDIEESMTHRSRFNWVLTMTYSAACAVKTLFAVFGFLS 227
Query: 258 XXXXXDDVKGSVTLNLPQDEIIAQSAKLIMAFVIYL--TYALQFYVPMEIITRMLATRKS 315
+ V V LN+P +I AFVI + TY L ++ + + +
Sbjct: 228 FKQNTNQV---VILNIPHG---IPRIIVITAFVISVLSTYPLPAHMLINTLQNGKLGELA 281
Query: 316 NSYE---NLIQITIRTCLVTLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIP 364
N+ + L R+ LV TV P+ L+ L G+I + LF P
Sbjct: 282 NASDITSRLFPFFARSVLVVSTVIAAICIPHYALLTSLSGSIVSYAVCLFFP 333
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 56.4 bits (130), Expect = 4e-08
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 135 QLSIQAYCALSLVPL---VVVCQIRNLKYLVPFSAIANALIFLVFAITLYYMFFDLPPVS 191
Q S + L L+PL V + IR ++ L P S +AN + F L + L
Sbjct: 570 QRSAPMFPLLLLIPLPFVVAMAFIRKIRKLGPISGLANIALLAGFFGLLVQILDGLHFKL 629
Query: 192 DRVMVANVSTWPLFLSTVIFAMEGIGVVMPVENEMANPR-RFLGCPGVLNTSMFIVITLX 250
+ V +AN T+P+F + A EGIG ++P+E+ M + R RF P L+ ++ + L
Sbjct: 630 NDVTLANWITFPIFFGQLTCAYEGIGCIIPIESGMGSNRPRF---PLYLHLTLAQLSVLL 686
Query: 251 XXXXXXXXXXXXDDVKGSVTLNLPQDEIIAQSAKLIMAFVIYLTYALQFYVPMEI 305
+DV VT L + AQ ++ + + TY LQ + ++I
Sbjct: 687 GSFGVLGFLIYGNDVPQIVTDKLTTG-LFAQLVRVTLIIAVLFTYPLQLFPVIQI 740
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 13 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK 58
++LK+ +G+ LA+P AFK SGL G++ +L + H +++K
Sbjct: 391 NVLKAFIGTSYLALPFAFKQSGLALGIVALVLIATITDHCCQMIIK 436
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 55.2 bits (127), Expect = 1e-07
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 15/259 (5%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEAKRPSLSFAETCG 79
G+GIL +P A + G AGV ++ +VC T +LV + E+KR +
Sbjct: 125 GTGILGVPYAVRMGGW-AGVAAIVVVAWVCCFTGKLLVDCLYE---ESKRTG----QRKR 176
Query: 80 AAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSIQ 139
Y +W G K V + +Y+V + + + L + P
Sbjct: 177 VRENYPDVGEATWPGWGNKIVSVVQVCEMYGGIVMYIVLLATIFYDMLKDFAPLDIYMWA 236
Query: 140 AYCALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFAITLYYMFFDLPPVSDR-VMVAN 198
CA+ +PL+ + ++ + ++ S A L+ + AI +Y F + +S R + V
Sbjct: 237 VACAVVALPLIFITRVSVIAWISMMSVFA--LLSGLLAIIIY-CFTEFDRMSLRNIPVFE 293
Query: 199 VSTWPLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXX 258
ST+P+ ++F+ V VE M +P++F P ++NTS +
Sbjct: 294 PSTFPIGFGIIVFSYCAHAVFPGVEGSMQDPQKF---PLMMNTSFTLAAFNKVLLGLLAV 350
Query: 259 XXXXDDVKGSVTLNLPQDE 277
D + VT+N+ E
Sbjct: 351 LRFGDQTEQVVTVNMGSKE 369
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 54.8 bits (126), Expect = 1e-07
Identities = 70/367 (19%), Positives = 146/367 (39%), Gaps = 32/367 (8%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK---TSQQICVEAKRPSLSFAE 76
G+G L +P + + G AG+ ++ +VC T +L++ + + + KR ++ E
Sbjct: 431 GTGTLGIPYSVRMGGW-AGITTILILAWVCCFTGKLLIECLYSESKSTGKIKRVYTNYPE 489
Query: 77 TCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQL 136
GA + PK IQ + ++ +Y+V + + L + P Q
Sbjct: 490 LGGAVW---PKFGNHLVSVIQVCEMFGGTI-------MYIVLLATLLTDLFTTCTPLRQQ 539
Query: 137 SIQAYCALSLVPLVVVCQIRNLKY--LVPFSAIANALI-FLVFAITLYY-MFFDLPPVSD 192
C +PL V ++ + + ++ A AL +++ IT Y+ M P D
Sbjct: 540 HWAVICTYIALPLAFVRRVSVIAWASMISVFAFTCALTTIIIYTITQYHHMSIQNIPAFD 599
Query: 193 RVMVANVSTWPLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXX 252
+ +P+ ++F+ V VE M NPR + P ++N + + +
Sbjct: 600 ------FTKFPVGFGIIVFSYTAHAVFPGVEASMRNPRMY---PQMMNVAFVVAAIVKTS 650
Query: 253 XXXXXXXXXXDDVKGSVTLNLPQDEIIAQSAKLIMAFVIYLTYALQFYVPMEII-TRMLA 311
+ +VT+N+ ++ + + + ++ + +V E + ++ L
Sbjct: 651 LGLLTVMVFGTTTQQAVTVNIKNSTVVNYLSNGFVIINVLFSFPINLFVITETLDSKFLR 710
Query: 312 ----TRKSNSYENLIQITIRTCLVTLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIPVAV 367
+S+ Y Q RT ++TL + + P+ L +G VG+ + L +P
Sbjct: 711 FFPHMDRSSEYNWAWQGLTRTLVLTLALVLVLIVPHFALFVGFVGSFTGTCLCFVLPCYF 770
Query: 368 QTIYLWE 374
W+
Sbjct: 771 NIKLKWQ 777
>SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35)
Length = 436
Score = 51.6 bits (118), Expect = 1e-06
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 28/368 (7%)
Query: 7 TLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQ--IC 64
T + L+ + GSG +A+P A GL AG +G IL + T+T HI+V +
Sbjct: 45 TWRATLNTINYMEGSGFVALPYAVARGGL-AGALGFILVPIIFTYTAHIMVDCLYEGGRY 103
Query: 65 VEAKRPSLSFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLK 124
E KR S+ E A ++ P + + F D+ S +S SSL
Sbjct: 104 TEKKRVRSSYEEI--ATAVWPPAGYMLNTLFVFSFFDHLTSYNLVS----------SSLL 151
Query: 125 EALDVYMPGYQLSIQAYCALSLVPLVV-VCQIRNLKYLVPFSAIANALIFLVFAITLYYM 183
L PG +S Q Y ++ + +V+ I+ + + S +A A + L + Y
Sbjct: 152 AGLQT--PGVDIS-QRYWSIIIGAVVLPTLFIKTFRSIAWLSLLATAALLLALLTVIVYD 208
Query: 184 FFDLPPVS-DRVMVANVSTWPLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTS 242
F + + ++ ++ + L ++ F+ V+ E M + +F + TS
Sbjct: 209 FHNYKSWDFNSLLFWDLQGFLLAINISAFSNGIHASVISFEKSMLHKSQFSLALAISYTS 268
Query: 243 MFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDEIIAQSAKLIMAFVIYLT-YALQFYV 301
I+ T +V V LN+PQ + ++ I V ++ Y L +
Sbjct: 269 TCIIKTAFAVLGFLAFKANTSEV---VILNIPQGTM--RTVVTITTVVSTMSGYPLVVQL 323
Query: 302 PMEII-TRMLATRKSNSYENLIQITI-RTCLVTLTVAIGAAFPNLELVIGLVGAIFFSTL 359
+ II R + S L I R +V +T P+ L L G++ L
Sbjct: 324 LISIIEKRKIGEFLSARLSPLAFFVISRVAIVVITTLAAICIPHFALWTSLGGSVVSYAL 383
Query: 360 GLFIPVAV 367
LF P A+
Sbjct: 384 SLFFPAAL 391
>SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35)
Length = 742
Score = 49.6 bits (113), Expect = 5e-06
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 19/273 (6%)
Query: 100 VDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSIQAYCALSLVPLVVVCQIRNLK 159
V L + +L+++ Y+V + SSL +DV +PG L+ ++ AL+ V + ++LK
Sbjct: 433 VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQSSWAALAGVCVFPALFCKSLK 489
Query: 160 YLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRVMVANVSTWPLF-LSTVIFAMEGIGV 218
+ S I+N + + F L + R + + LF ++ ++F+ V
Sbjct: 490 SMAWVSCISNITLIISFIAVLISELSNYATWDFRTLFFWDTRGVLFSINIIVFSYSIQAV 549
Query: 219 VMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDEI 278
V+ +E M + RF + ++ +V TL + V V LN+P
Sbjct: 550 VIDIEESMTHRSRFNWVLTMTYSASCVVKTLFAVFGFLSFKKNTNQV---VILNIPHG-- 604
Query: 279 IAQSAKLIMAFVIYLTYALQFYVPMEIITRMLATRKSNSYENLIQIT-------IRTCLV 331
I + +I AFVI + + VP ++ L + + N IT R+ LV
Sbjct: 605 IPRIVGII-AFVI--SVLSTYPVPAHMLINTLQSGRLGELANASDITSRLFPFFARSVLV 661
Query: 332 TLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIP 364
TV P+ L+ L G+I + LF P
Sbjct: 662 ISTVIAAICIPHYALLTSLSGSIVSYAICLFFP 694
>SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 49.6 bits (113), Expect = 5e-06
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 19/273 (6%)
Query: 100 VDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSIQAYCALSLVPLVVVCQIRNLK 159
V L + +L+++ Y+V + SSL +DV +PG L+ ++ AL+ V + ++LK
Sbjct: 1083 VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQSSWAALAGVCVFPALFCKSLK 1139
Query: 160 YLVPFSAIANALIFLVFAITLYYMFFDLPPVSDRVMVANVSTWPLF-LSTVIFAMEGIGV 218
+ S I+N + + F L + R + + LF ++ ++F+ V
Sbjct: 1140 SMAWVSCISNITLIISFIAVLISELSNYATWDFRTLFFWDTRGVLFSINIIVFSYSIQAV 1199
Query: 219 VMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDEI 278
V+ +E M + RF + ++ +V TL + V V LN+P
Sbjct: 1200 VIDIEESMTHRSRFNWVLTMTYSASCVVKTLFAVFGFLSFKKNTNQV---VILNIPHG-- 1254
Query: 279 IAQSAKLIMAFVIYLTYALQFYVPMEIITRMLATRKSNSYENLIQIT-------IRTCLV 331
I + +I AFVI + + VP ++ L + + N IT R+ LV
Sbjct: 1255 IPRIVGII-AFVI--SVLSTYPVPAHMLINTLQSGRLGELANASDITSRLFPFFARSVLV 1311
Query: 332 TLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIP 364
TV P+ L+ L G+I + LF P
Sbjct: 1312 ISTVIAAICIPHYALLTSLSGSIVSYAICLFFP 1344
>SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40)
Length = 440
Score = 43.6 bits (98), Expect = 3e-04
Identities = 77/380 (20%), Positives = 156/380 (41%), Gaps = 22/380 (5%)
Query: 10 SILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEAKR 69
++++LL G GILA+P A VA + ++ V +T IL++ + + +
Sbjct: 46 AVVNLLSYIEGPGILALPFALSEGNGVA-LAALVVVPMVAFYTGKILIECLYDLKINGR- 103
Query: 70 PSLSFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEAL-D 128
+ E YG R W V S +++ + +Y+V +G LK +L D
Sbjct: 104 -IVRVREN-----YYGIAR-EIWPRFGAHVVVASQLMSFCLLGSLYLVLMGDLLKTSLPD 156
Query: 129 VYMPGYQLSIQAYCALSLVPLVVVCQIRNLKYLVPFSAIANAL-IFLVFAITLYYMFFDL 187
+ + Q + C + VP + + + +L S A L + LV ++Y +
Sbjct: 157 LTLSTRQWMVIMAC--TGVPSSLFRSLAQVAWLSLLSIFALILSVVLVVVYSVYNHSTWV 214
Query: 188 PPVSDRVMVANVSTWPLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVI 247
S+ + N+ + P+ L+ V+F+ + +E ++N + +L S +
Sbjct: 215 ITTSNILPQVNIESVPIALAIVVFSYSAHASLPGLEASLSNRTNY---NAILGLSYSLSC 271
Query: 248 TLXXXXXXXXXXXXXDDVKGSVTLNLPQDEI-IAQSAKLIMAFVIYLTYALQFYVPMEII 306
+ ++ +T ++P I IA +A LI+ + +Y + + I+
Sbjct: 272 FIKLVFTFAAFLTFHPNILPVITTSMPMSHIYIAVTAFLILNSL--FSYPYRIMAMVHIV 329
Query: 307 TRMLATRKSNS-YENLIQIT-IRTCLVTLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIP 364
L S +L+ T +R L LT+ P+ L++ +G++ S L I
Sbjct: 330 ENSLIPESIRSRVPDLVWYTVVRLVLNFLTLIPAVLIPHFALLMAFMGSV-ISILTAIIY 388
Query: 365 VAVQTIYLWEKDFGRFNYIL 384
V ++L ++ + +L
Sbjct: 389 PCVFHLFLKHREISLWQTLL 408
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 42.7 bits (96), Expect = 6e-04
Identities = 81/369 (21%), Positives = 140/369 (37%), Gaps = 28/369 (7%)
Query: 5 NRTLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQ-I 63
N T + L+ + G+G LA+P A G +AG +G IL + +T +I V + +
Sbjct: 876 NSTWRATLNTINYMEGTGFLALPYAVSRGG-IAGALGFILVPIILAYTAYISVDCAYEGG 934
Query: 64 CVEAKRPSLSFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSL 123
+AK+ S G A W+ A + +D V+ L + + + SSL
Sbjct: 935 KYKAKKRVRSSLAEIGKAV---------WAPA-EHIIDGLFIVSLFDTLTSFNL-VCSSL 983
Query: 124 KEALDVYMPGYQLSIQAYCALSLVPLVVVCQIRNLKYLVPFSAIANALIFLVFAITLYYM 183
L + + A++L L I+ + LV S + A + L F + Y
Sbjct: 984 LAGLQIPSISQRYWSVIIGAVALPSLF----IKTFRSLVWLSLLGTASLLLAFITVIVYE 1039
Query: 184 FFDLPPVSDRVMVANVSTWPLFLSTVIFAMEGIG-VVMPVENEMANPRRFLGCPGVLNTS 242
F + R ++ LF + GI V+ +E M + + + TS
Sbjct: 1040 FREYKSWDFRALLFWDFNGFLFSLNIALFSNGIHCAVLSIEKSMKHKSQICQLLAISYTS 1099
Query: 243 MFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDE----IIAQSAKLIMAFVIYLTYALQ 298
I+ TL +V V LN+PQ +I + ++ L++ L
Sbjct: 1100 TSIIKTLFAVLGFLAFKANTSEV---VILNIPQGTMRTVVIITTVISTLSGYSLLSHLLI 1156
Query: 299 FYVPMEIITRMLATRKSNSYENLIQITIRTCLVTLTVAIGAAFPNLELVIGLVGAIFFST 358
+ + I + +R S+ +I R +V ++ P+ L I L I
Sbjct: 1157 SIIESKKIGEFIGSRLSSFAFFIIS---RFAVVIISSLTAICIPHFALWISLSACIGGYV 1213
Query: 359 LGLFIPVAV 367
LF P A+
Sbjct: 1214 TCLFFPAAL 1222
>SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 703
Score = 37.9 bits (84), Expect = 0.016
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 15/156 (9%)
Query: 220 MP-VENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXXDDVKGSVTLNLPQDEI 278
MP +E M P F V+N + V + D +T NLP+ +
Sbjct: 171 MPAIEGSMQRPHNF---NNVMNVTYIAVTFVKVFFGFIGYLTFTRDTDQVITNNLPEG-V 226
Query: 279 IAQSAKLIMAFVIYLTYALQFYVPMEIITRML---------ATRKSNSYENLIQ-ITIRT 328
+ L++ F+ +Y + Y +I+ + ++ K + Q +T R
Sbjct: 227 LHMVVNLLVLFLAATSYTIPVYTVFDILENISFPCGRMEHPSSAKGKDKLSYFQALTARL 286
Query: 329 CLVTLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIP 364
C+++ T+ +G P+ L + LVG+ L P
Sbjct: 287 CVISFTLLVGVLVPHFGLYMALVGSFTGMCLAFIFP 322
>SB_46723| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 163
Score = 35.9 bits (79), Expect = 0.063
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK-TSQQICVEAKRPSLSFAETC 78
G+G LA+P A GL AG + G + +T ++L++ + + KR S+ +
Sbjct: 34 GTGFLALPYAVARGGL-AGALSFAFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 92
Query: 79 GAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSI 138
AA++ P +G V L + +L+++ Y+V + SSL +DV +PG L+
Sbjct: 93 QAAWL--P------AGGT---VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQ 138
Query: 139 QAYCALSLVPLVVVCQIRNLK 159
++ AL+ V + ++LK
Sbjct: 139 SSWAALAGVCVFPALFCKSLK 159
>SB_40988| Best HMM Match : Sm_multidrug_ex (HMM E-Value=1.4)
Length = 178
Score = 35.9 bits (79), Expect = 0.063
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK-TSQQICVEAKRPSLSFAETC 78
G+G LA+P A GL AG + G + +T ++L++ + + KR S+ +
Sbjct: 49 GTGFLALPYAVARGGL-AGALSFAFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 107
Query: 79 GAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMPGYQLSI 138
AA++ P +G V L + +L+++ Y+V + SSL +DV +PG L+
Sbjct: 108 QAAWL--P------AGGT---VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQ 153
Query: 139 QAYCALSLVPLVVVCQIRNLK 159
++ AL+ V + ++LK
Sbjct: 154 SSWAALAGVCVFPALFCKSLK 174
>SB_43974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 35.1 bits (77), Expect = 0.11
Identities = 30/163 (18%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 203 PLFLSTVIFAMEGIGVVMPVENEMANPRRFLGCPGVLNTSMFIVITLXXXXXXXXXXXXX 262
PL L+ +IF+ V+ +E MA+P +F + S+F+V +
Sbjct: 800 PLALAIIIFSYICHPVLPGIEANMADPNKFNTMLALSYASVFLVKIVFSMCAFLSFSTHI 859
Query: 263 DDVKGSVTLNLPQDEIIAQSAKLIMAFVIYLTYALQFYVPMEIITRMLATRKSNSYENLI 322
+V +T +LP + S + + I L+Y + ++++ ++ + + +++
Sbjct: 860 SEV---ITNSLPLG-YLKISVNIFLLLSIVLSYPFRVMTIIQVLESVIPDSLISKFPSIV 915
Query: 323 Q-ITIRTCLVTLTVAIGAAFPNLELVIGLVGAIFFSTLGLFIP 364
I +R + LT+ + P L + G++ + + P
Sbjct: 916 WFIFVRIFVNFLTLIPAVSIPRFALFMAFAGSLTGTCMSFLFP 958
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 34.7 bits (76), Expect = 0.15
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 8 LGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQIC 64
L SI L+ + +G G+L++P AF+ G V + I TH +++ S++ C
Sbjct: 233 LSSIFTLVSTMIGGGVLSLPFAFQQGGFVMSSLVLIFVLMASTHGGFLII-NSKKYC 288
>SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018)
Length = 288
Score = 33.9 bits (74), Expect = 0.26
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 13/192 (6%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILV-----KTSQQICVEAK--RPSL 72
G+G+L +P A + G++ V+G I+ + +T IL+ K +Q E + + S
Sbjct: 73 GTGVLGLPYAVREGGIIV-VLGLIILAVISNYTGQILIGCLYTKDPKQDDEEVRLVKKSK 131
Query: 73 SFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEALDVYMP 132
E Y G K V + + +SV +Y+V GS L P
Sbjct: 132 EKDERKRVRLTYEDIGEVCLPGFGGKIVVATQVLELMSVSTLYLVLSGSLLVNT----FP 187
Query: 133 GYQLSIQAYCALSLVPLVVVCQIRNLKYLVPFSAIAN-ALIFLVFAITLYYMFFDLPPVS 191
++ + + ALS V ++ +++L ++ S ++ +L+ V A+ +Y +
Sbjct: 188 RVPITHRGWIALSTVLVLPTVFLKSLAHVAWLSLVSTVSLMATVAAVIVYGISVHDQWDI 247
Query: 192 DRVMVANVSTWP 203
D ++ NV T P
Sbjct: 248 DSIVSCNVDTVP 259
>SB_55970| Best HMM Match : Ion_trans_2 (HMM E-Value=8.7e-12)
Length = 434
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 194 VMVANVSTWPLFLSTVIFAMEGIGVVMPVENEMANPRRF 232
+M++ + TWP L TV+ A+ G+VM + + ANP F
Sbjct: 301 IMLSVLGTWPCLLLTVLMALLA-GIVMWMLDTTANPEHF 338
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK-TSQQICVEAKRPSLSFAETC 78
G+G LA+P A GL AG + G + +T ++L++ + + KR S+ +
Sbjct: 49 GTGFLALPYAVSRGGL-AGALSFAFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 107
Query: 79 GAAFM 83
AA++
Sbjct: 108 QAAWL 112
>SB_27407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK-TSQQICVEAKRPSLSFAETC 78
G+G LA+P A GL AG + G + +T ++L++ + + KR S+ +
Sbjct: 49 GTGFLALPYAVARGGL-AGALSFAFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 107
Query: 79 GAAFM 83
AA++
Sbjct: 108 QAAWL 112
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.5 bits (63), Expect = 5.5
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 10 SILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEAKR 69
+ ++ + +G+GILAMP + +G GV IL + +T IL+ + E
Sbjct: 31 AFFNIFNANMGTGILAMPYVIRLTG-YWGVAIVILVALLGNYTGKILIHCLHENTPEGHF 89
Query: 70 PSLSFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYLSVLC---VYVVFIGSSLKEA 126
++A+ G AF PK R F +S +L ++C ++ F S + E+
Sbjct: 90 NKFTYAD-LGEAFW--PKYGRLMVHITNFFEQFSHCTLFL-IMCGTVMHHTFPDSGISES 145
Query: 127 L 127
L
Sbjct: 146 L 146
>SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02)
Length = 385
Score = 29.1 bits (62), Expect = 7.3
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 20 GSGILAMPAAFKNSGLVAGVIGTILAGFVC--THTVHILVKTSQQICVEAKRPSLSFAET 77
G GILA+P++ +G+++G I + F+ + T I V ++ V + +T
Sbjct: 27 GVGILALPSSIAKAGIISGSICLTIVAFMAFVSATFLIEVLSTANAWVRFHPIHIGKGQT 86
Query: 78 CGAAFM-YGPKRL-RSWSGAIQKFVDYSLSVTYLSVLCVYVVFIGSSLKEA-LDVYMPGY 134
AF +G K + +S S + + SV + +++ +GS+L A L +Y+ G
Sbjct: 87 KACAFKEFGEKLVAKSKSLGLTNPFEIVESVELGQMTELFLGTVGSTLFYAVLCLYLFG- 145
Query: 135 QLSIQAYCALSLVPLVVVCQ--IRNLKYLVPFSAIANALIFLVFAIT 179
L+I A + + V+ Q I +L+ F + F F T
Sbjct: 146 DLAIYAVSVATTLTRVLGSQPEISYYSFLLGFIMVIGPFCFFNFQKT 192
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.328 0.141 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,868,036
Number of Sequences: 59808
Number of extensions: 422192
Number of successful extensions: 1034
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1006
Number of HSP's gapped (non-prelim): 32
length of query: 429
length of database: 16,821,457
effective HSP length: 84
effective length of query: 345
effective length of database: 11,797,585
effective search space: 4070166825
effective search space used: 4070166825
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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