GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001298-TA|BGIBMGA001298-PA|IPR003409|MORN motif
         (140 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    28   0.10 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.2  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   5.0  
AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    23   5.0  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 112 RMVRRKRCPEVVQRAQKVAYMARAQCQQ 139
           R ++R+RCPEV Q+ + V   AR++ Q+
Sbjct: 296 RKMQRERCPEVKQQLRIVYIAARSELQR 323


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 43  DGTRYDGALIGGLCSGLG 60
           DG  Y+GA  GG+ SG+G
Sbjct: 543 DGPEYEGAGRGGVGSGIG 560


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 77  GWFHGHGVFWRADGLVTFNDGSNG 100
           GWF G  +    DG  T   G++G
Sbjct: 126 GWFVGRNLSDTFDGTFTMRTGADG 149


>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 65  PDGAKYEGEFMQGW 78
           PD A+YEG+ ++ W
Sbjct: 119 PDHAQYEGKVVERW 132


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.143    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,160
Number of Sequences: 2123
Number of extensions: 7533
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 140
length of database: 516,269
effective HSP length: 58
effective length of query: 82
effective length of database: 393,135
effective search space: 32237070
effective search space used: 32237070
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)