Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001297-TA|BGIBMGA001297-PA|undefined
(522 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 32 0.17
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 31 0.52
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 30 0.90
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 1.2
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 29 1.6
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 29 2.1
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 29 2.1
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 2.8
SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosac... 28 3.6
SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p... 27 4.8
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 6.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 6.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 8.4
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 8.4
SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 8.4
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 27 8.4
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 8.4
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 32.3 bits (70), Expect = 0.17
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 168 EKVDDY-LKEYNKDEVVTLSGELEIEH-NDFENNNGTSKD-IRHKPRKTKRKSRDERRDT 224
E +DY L +D V T+SG+ E E ++ E+N+ + +D + P K + + +D
Sbjct: 132 ESDEDYDLSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSAPAKKAQVKKKRTKDE 191
Query: 225 NANGRDVSPKVFKTGSKSKQGKSVR 249
+ SPK T + +G V+
Sbjct: 192 SEQEEAASPKKNNTKKQKVEGTPVK 216
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 30.7 bits (66), Expect = 0.52
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 188 ELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKS 247
E EI N F N+ + +D+ P K K S + ++N +G P+ + + S
Sbjct: 200 EEEISFNSFSNSLNSEEDVCVSPMKPKEVSLMGKANSNRSGHSHQPQSTQFSPPANDNIS 259
Query: 248 VRPTDLSAMLQTLES 262
P+ + + L+S
Sbjct: 260 KLPSSFTIVNDPLKS 274
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 29.9 bits (64), Expect = 0.90
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 171 DDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGR 229
+D + ++DE TL + + DF N G ++ + HK + K D+ D + NG+
Sbjct: 64 EDMFSDTSEDEKRTLPNDEAQKRRDFIEN-GDAERLAHKGLRNKEVLNDDSDDEDDNGK 121
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 1.2
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 3/165 (1%)
Query: 61 KSKRGSWIKSEHESLDTELPIHDQIKQDILGFVEKEIKKSDKNPSFVFYSH-DPNGLDEK 119
K + S S+++S P D++ ++++ +K KKS K + F + D ++E+
Sbjct: 42 KLNKASAFNSDNDSNYDLKPEDDEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVEEE 101
Query: 120 FLKSLSRPSSGHKEXXXXXXXXXXXXXXXXXXXXXXXFEIPGSSLSALEKVDDYLKEYNK 179
+ +P +K+ E S +K K +
Sbjct: 102 EEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDD 161
Query: 180 DEVVTLSGELEIEHNDFENNNGTSK--DIRHKPRKTKRKSRDERR 222
G++E D + + + D K RKT++K R+
Sbjct: 162 GSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARK 206
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 204 KDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESS 263
K I K ++TK+K R +S + ++ + S+ PT S+M + +
Sbjct: 111 KAIAPKKKQTKQKKPSVRGRRGRKPSSLSSSTLHSVNEKQPNSSISPTIESSMNKV---N 167
Query: 264 IPYHEDYID-NPF-SSPSPVTSPNDERL 289
+P E+ + P +SP+ + SPND +
Sbjct: 168 LPGAEEQVSATPLPASPNALLSPNDNTI 195
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 200 NGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGK-SVRPTDLSAMLQ 258
N T ++ H R SR + R P + G +S+ + S P ++
Sbjct: 16 NETDRETNHSRRHRHHHSRHRESKHGRHDRSERPSSREAGDRSRHERFSKEPLEVK---- 71
Query: 259 TLESSIPYHEDYIDNPFSSPSPVTSPND 286
+P +Y D+ F+S S + S D
Sbjct: 72 ----KLPVENEYFDSKFASASSMPSSKD 95
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 28.7 bits (61), Expect = 2.1
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 164 LSALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRD 223
L +EK+++ L E +K + + EI+++ NGT ++ P K + D+ +
Sbjct: 786 LENIEKIEEKLTEVDKVSLSDAFPDQEIKNSRTSVQNGTRSVSKNTPEKETKV--DKIDN 843
Query: 224 TNANGRDVSPKVFKTGS---KSKQGKSVRPTDLSAMLQTLESSIPYHEDYIDNPF 275
+ + SP +T S K+ K V +L ++ + L+ S + D+ +PF
Sbjct: 844 VSKKDVETSPGSCETSSAFAKTYAEKEVTSINLPSVRKPLDES---YYDHSISPF 895
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 198 NNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTG-SKSKQGKSV 248
NNN T+ R S D +RD G+D + + +G S S+Q ++
Sbjct: 1487 NNNSTNVSRERSSEANHRTSNDNKRDEVTEGKDKNKRQDISGESNSRQNNAI 1538
>SPBC19C2.07 |fba1||fructose-bisphosphate aldolase
Fba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 358
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 228 GRDVSPKVFKTGSKSKQGKSVRPTDLS-AMLQTLESSIPYHEDYIDNPFSSPSPVTSPND 286
G S F+TG K K TD A ++ + + ++DY+ P +P PN
Sbjct: 266 GSGSSVNEFRTGIKCGVVKVNIDTDTQFAYVEGVRDYVLKYKDYLMTPVGNPEGADKPNK 325
Query: 287 ERLD 290
++ D
Sbjct: 326 KKFD 329
>SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 199 NNGTSKDIRHKPRKTKRKSRDERRDTNANGR---DVSPKVFKTGSKSKQGKSVRP 250
NNG + I++ + T + S + NG+ ++ PK KT K KS P
Sbjct: 127 NNGNNAPIKNGVKSTAKGSAGNHEKNSVNGQKNPEMPPKRRKTEENKKPTKSALP 181
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 188 ELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKS 247
E + F T D+RH RK+ +++N + S K+ K S+S + KS
Sbjct: 611 ETTASSDSFRKYANTLNDLRHLKSSRNRKATSNETQSSSNSTETS-KLSKNVSESGKDKS 669
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 203 SKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGK 246
SKD KP K K +E+ + + +DV K+ + GK
Sbjct: 525 SKDTNEKPAKDDNKEANEKAE-KVDSKDVKEKIEEAADLQNSGK 567
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 168 EKVDDYL--KEYNKDEVVTLSGELEIEHNDFENNNGTSKDI 206
E +D+Y +E + EV T ELE+ DF + N ++ I
Sbjct: 852 ESIDNYEQNREALESEVATAEAELELLKEDFASENSKTEKI 892
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 207 RHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTD 252
R P+ R + DER + +PKV + KQGKS P+D
Sbjct: 228 RLSPQPYVRPTSDER-PIETDSSVSAPKVANHDEELKQGKSTSPSD 272
>SPAC23D3.01 |||PWWP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 8.4
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 190 EIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVR 249
++E ++FE N T K ++ KP + +K + E G+ + + K+ ++ Q R
Sbjct: 163 DVEEDEFEPEN-TRKKLQ-KPIEKPKKEKIEATPKIDGGKRLKNE--KSSAEISQTSKQR 218
Query: 250 PTDLSAMLQTLESSIPYHEDYIDNPFSSPSPVTSP 284
P+ SA ++ DN SPSP+ SP
Sbjct: 219 PSRRSARVRMAT----------DNAQKSPSPIPSP 243
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 26.6 bits (56), Expect = 8.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 305 GGTFTAVSRDRILQPQR-SRDGDKYLSLADHTPLDVALMLQKAWKS 349
G T+T +S +RIL P+ + GD+Y L + V L QK KS
Sbjct: 588 GLTYTTMSDERILNPKEVQKIGDEYF-LISNPKEKVQLSYQKMSKS 632
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 254 SAMLQTLESSIPYHEDYIDNPFSSPSPVTSPNDERLDRFGARRTEKIYLQGGGTFT 309
S+ + L SS + + +P S ++ N RFGA ++ Y++G G+ +
Sbjct: 390 SSPINRLSSSFKQYTSSLKSPGLSTRTSSTMNSLNSSRFGAYFSKSRYVEGSGSMS 445
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,305,498
Number of Sequences: 5004
Number of extensions: 96154
Number of successful extensions: 317
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 313
Number of HSP's gapped (non-prelim): 21
length of query: 522
length of database: 2,362,478
effective HSP length: 76
effective length of query: 446
effective length of database: 1,982,174
effective search space: 884049604
effective search space used: 884049604
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -