Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001297-TA|BGIBMGA001297-PA|undefined
(522 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0170 - 1373986-1374013,1374061-1374326,1374693-1374926,137... 33 0.42
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 33 0.56
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 32 1.3
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 32 1.3
12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362 30 3.9
12_02_0440 - 19109807-19110132,19110219-19110291,19110444-191105... 30 3.9
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26... 30 3.9
01_05_0286 - 20403748-20403828,20404493-20404693,20404774-204049... 30 3.9
04_03_0517 + 16712487-16712570,16713715-16714059,16714149-167143... 30 5.2
01_05_0283 - 20354065-20354154,20354579-20354890,20355566-203557... 30 5.2
11_06_0710 - 26492093-26493460 29 9.0
11_06_0028 - 19393700-19393899,19394058-19394116,19394437-193945... 29 9.0
06_01_0125 + 970746-970967,971126-971226,971897-972026,972108-97... 29 9.0
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 29 9.0
01_03_0119 + 12709976-12710057,12710157-12710230,12710312-127108... 29 9.0
>11_01_0170 -
1373986-1374013,1374061-1374326,1374693-1374926,
1375034-1375171,1375255-1375557,1376008-1376172,
1376469-1376933
Length = 532
Score = 33.5 bits (73), Expect = 0.42
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 158 EIPGSSLSALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKS 217
E S + + DY E+ K+E++ + E +++ D + DI H + +R+
Sbjct: 231 EFDPDSSEFVSDISDYTTEFKKEEILHIPFEFDLDRADL------APDIEHHSIELQREQ 284
Query: 218 RDERRDTNANGRDVSPKVFKTGSKSKQ 244
+ D + + ++SP + + +K KQ
Sbjct: 285 MEIPLDFDPDSAELSPDITEYTTKLKQ 311
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 33.1 bits (72), Expect = 0.56
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 171 DDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRD 230
D Y +Y+ D + SG ++ + +S D RHK RK+ +K D+ R +
Sbjct: 182 DSYSSDYS-DTQSSDSGSESESYSSSSLDTSSSSDHRHKRRKSSKK--DKHRSAKGKSKH 238
Query: 231 VSPKVFKTGSKSKQGKSVR 249
K G+K K +S R
Sbjct: 239 KKTKRKSRGTKRKSKRSYR 257
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 31.9 bits (69), Expect = 1.3
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 168 EKVDDYLKEYNKDEVVTLSGELEIEH--NDFENNNGTSKDIRHKPRKTKRKSRDERRDTN 225
E++ + N +V +L H ND E N S +RH +KRK R +R
Sbjct: 552 EEISAAKSQKNGSSLVIRDNDLSEPHDTNDEEEGNSDSSSVRHLEGNSKRKGR--KRSKQ 609
Query: 226 ANGRDVSPKVFKTGSKSKQG 245
A D S T +K+G
Sbjct: 610 AANDDSSVVKDSTRKSTKRG 629
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 31.9 bits (69), Expect = 1.3
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 175 KEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANG------ 228
K YN D+ ++ G ++ + F+ G+ + +RH + +SR + +A G
Sbjct: 672 KRYNDDDKSSMYGNID-KKGSFKEEKGSDRSVRHGADTREPRSRGNSKQDDAKGERKDYQ 730
Query: 229 RDVSPKVFKTGSKSKQGK 246
+DV K + + ++GK
Sbjct: 731 KDVREKSRDSADRREKGK 748
>12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362
Length = 197
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 193 HNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTD 252
+ ++E + + + + R+ER + A RD+ K+FK K++ G+ V
Sbjct: 127 NEEYEKKRAEDEKAKKEREAIIQAKREERERSEARRRDLREKMFK---KTRSGQPVMKYR 183
Query: 253 LSAMLQT-LESS 263
+ +L+T LESS
Sbjct: 184 IQHLLETALESS 195
>12_02_0440 -
19109807-19110132,19110219-19110291,19110444-19110586,
19110787-19111002,19111072-19111387,19111474-19111884,
19113979-19114005
Length = 503
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 176 EYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPK 234
+ N D+ +T S + ++E ++ N + KP + KR+ +R N N D K
Sbjct: 441 DLNNDDPITASEQSKVEVSNQLNQRRQTVSTSRKPPEDKREKNPKRHKQNGNVADAMEK 499
>06_01_0026 +
265755-265968,267319-267468,267694-267738,267786-268460,
268779-268843,268854-269073,269163-269438,269547-269663,
269776-269853,269930-270184,270235-270323,270403-270816
Length = 865
Score = 30.3 bits (65), Expect = 3.9
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 196 FENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSP-KVFKTGSKSKQGKSVRPTDLS 254
FE +G K ++ + + + +A+ + S V G +Q +S RP
Sbjct: 445 FEPGDGPKKTDAGPEKEPLLPDKQDSNNGSASSVEGSTASVHSHGISVQQQESKRPLPAE 504
Query: 255 AMLQTLESSIPYHEDYIDNPFSSPSPVTSPNDERLDRFGARRTEKIYLQGGGTFTAVSRD 314
+ Q L+ S ED+ FS S V +P+ +T +LQ G T + +
Sbjct: 505 SSSQ-LQPSNTKKEDFGTVSFSGSSSVEAPSSSSASIINPGQTATGFLQTGETHVVIGQQ 563
Query: 315 RILQPQ 320
I+ Q
Sbjct: 564 DIVLQQ 569
>01_05_0286 -
20403748-20403828,20404493-20404693,20404774-20404955,
20405022-20405187,20405318-20405506,20409155-20409238,
20409482-20409550,20409638-20409700,20410327-20410425,
20410882-20410983,20411237-20411341,20412259-20412372
Length = 484
Score = 30.3 bits (65), Expect = 3.9
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 216 KSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESSIPYHEDYIDNPF 275
KS R+D N +D++ + +SKQ +S PTD + +S I E +D+
Sbjct: 153 KSSQIRKDKNV--QDIT----RDSEESKQSESCIPTDKNVQDIASDSEIKTSEQRVDSTT 206
Query: 276 SSPSPVTSPNDERLDR 291
+ S SP E L R
Sbjct: 207 HATSHKDSPETETLTR 222
>04_03_0517 +
16712487-16712570,16713715-16714059,16714149-16714301,
16714889-16714972,16715426-16715479,16715552-16715647,
16716163-16716258,16716941-16717086,16717650-16717799,
16717889-16718018,16718128-16718787,16718881-16718979,
16719058-16719210,16719323-16720054,16720338-16720640
Length = 1094
Score = 29.9 bits (64), Expect = 5.2
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 211 RKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLS--AMLQTL-----ESS 263
R+ R+ +DE + G D S F TG +++ + LS QT+ +
Sbjct: 439 REQIRQLKDELHRMKSGGSDGSNGSFSTGWNARRSLHLLKMSLSRPTTFQTIHEDSGDVE 498
Query: 264 IPYHEDYIDNPFSSPSPVTSPNDERLDRFGARRTEKIYLQGGGTFTAVSRDRILQPQRSR 323
+ E+ ++ P++ + V SP D+ + + GG + + ++ +RS
Sbjct: 499 MEIDENDVEKPYNQDNMVISPPG---DKECKELQASLKINGGTSLDVFDGENLMPTKRSC 555
Query: 324 DGDKY-LSLA 332
D+Y L+LA
Sbjct: 556 SDDRYKLNLA 565
>01_05_0283 -
20354065-20354154,20354579-20354890,20355566-20355763,
20356371-20356754,20357445-20357858,20359771-20360022
Length = 549
Score = 29.9 bits (64), Expect = 5.2
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 205 DIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTD 252
D+ K R+ RK R+ R+ A RD T K GK P D
Sbjct: 146 DVSEKIREHLRKKRERRKKRAAQNRDNCVTAKSTSDDIKSGKDPLPVD 193
>11_06_0710 - 26492093-26493460
Length = 455
Score = 29.1 bits (62), Expect = 9.0
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 197 ENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAM 256
E+N+G K K +K+K KS DE D PK K+ SKSK S + +
Sbjct: 201 EDNDGAKKK---KKKKSKGKSSDEEDDEK-------PKK-KSKSKSKSSSSDEEDEKKSK 249
Query: 257 LQTLESSIPYHEDYIDNPFSSPSPVTSPNDE 287
+ ++ P ED S+ + ++P +E
Sbjct: 250 SEGQAAAKPKEEDEEGGSASASASTSAPKNE 280
>11_06_0028 -
19393700-19393899,19394058-19394116,19394437-19394521,
19395305-19395474,19397534-19397613,19398288-19398392,
19399268-19399308,19399400-19399438,19400473-19400818,
19401762-19401815,19402249-19402350
Length = 426
Score = 29.1 bits (62), Expect = 9.0
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Query: 180 DEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTG 239
DE + ELE + + + + + +HKP+ + ++ ++ DT + K G
Sbjct: 134 DENIRKQQELE-KSQVVDKSVKSGRSAQHKPKGSNADAKTDKEDTKIIIKGKKRKSQPGG 192
Query: 240 SKSKQGKSVRPTDLSAMLQTLESSIPYHEDYIDNPFSSPSPVTSPN-DERLDRFGARRTE 298
++ K+ KS +S TL+ + +++ SP D+ L ++ RT+
Sbjct: 193 TEEKERKSSESLFMSHFPSTLKKQLVDDWEFVTQLGKLVKLPRSPTVDDILKKYLEHRTK 252
Query: 299 K 299
K
Sbjct: 253 K 253
>06_01_0125 +
970746-970967,971126-971226,971897-972026,972108-972333,
972400-972502,972519-972594,972710-973333
Length = 493
Score = 29.1 bits (62), Expect = 9.0
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 168 EKVDDYLKEYNKDEVVTLSGELEIEHND-------FENNNGTSKDIRHKPRKTKRKSRDE 220
+++DD ++ Y K E T ++ HN+ E NN TS D R +P T+ +
Sbjct: 285 DRIDDVVQMYEKTEPFTFMHCWKLLHNEAKWNNKFLELNNSTSPD-RMEPPSTQGHTVAG 343
Query: 221 RRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSA 255
++ D + + +K ++ KS T S+
Sbjct: 344 HAESGNENIDTARPEGRDSAKRRRSKSYAETSSSS 378
>05_01_0397 -
3129679-3130144,3130655-3131104,3132215-3132273,
3133136-3133305,3134655-3134771,3134980-3135166
Length = 482
Score = 29.1 bits (62), Expect = 9.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 198 NNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSK 243
NNNG ++ + P T R +R + DT G +SP F GS S+
Sbjct: 289 NNNGVAEQ-QGVPFGTTRAARVDG-DTQRRGSSISPSYFSNGSGSR 332
>01_03_0119 +
12709976-12710057,12710157-12710230,12710312-12710809,
12711520-12712095,12712181-12712288,12712349-12712393,
12712614-12713342
Length = 703
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 218 RDERRDTNANGRDVSPKVFKTGSKSKQGKSVR 249
++ R N N R + KV KTG+K Q +V+
Sbjct: 574 KENRHQENRNVRQANDKVVKTGTKQPQASTVK 605
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,090,281
Number of Sequences: 37544
Number of extensions: 562035
Number of successful extensions: 1592
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1579
Number of HSP's gapped (non-prelim): 22
length of query: 522
length of database: 14,793,348
effective HSP length: 85
effective length of query: 437
effective length of database: 11,602,108
effective search space: 5070121196
effective search space used: 5070121196
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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