Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001297-TA|BGIBMGA001297-PA|undefined
(522 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 38 0.016
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 33 0.35
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 32 0.81
At5g56960.1 68418.m07110 basic helix-loop-helix (bHLH) family pr... 32 1.1
At3g61620.1 68416.m06906 exonuclease RRP41 (RRP41) identical to ... 31 1.9
At3g61670.1 68416.m06911 expressed protein weak similarity to ex... 31 2.5
At3g01175.1 68416.m00022 expressed protein 31 2.5
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 30 3.3
At1g70100.2 68414.m08066 expressed protein 30 3.3
At3g62900.1 68416.m07066 expressed protein ; expression supporte... 29 5.7
At2g42190.1 68415.m05221 expressed protein ; similar to GP|9826|... 29 5.7
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 5.7
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 5.7
At4g38550.1 68417.m05458 expressed protein 29 7.5
At3g46220.1 68416.m05003 expressed protein 29 7.5
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 29 7.5
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 29 7.5
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 29 9.9
At5g26720.1 68418.m03167 expressed protein 29 9.9
At4g02800.1 68417.m00380 expressed protein similar to A. thalian... 29 9.9
At3g29075.1 68416.m03637 glycine-rich protein 29 9.9
At3g24340.1 68416.m03056 SNF2 domain-containing protein / helica... 29 9.9
At1g65120.2 68414.m07382 ubiquitin carboxyl-terminal hydrolase-r... 29 9.9
At1g65120.1 68414.m07383 ubiquitin carboxyl-terminal hydrolase-r... 29 9.9
At1g44780.1 68414.m05130 expressed protein ; expression supporte... 29 9.9
At1g36060.1 68414.m04481 AP2 domain-containing transcription fac... 29 9.9
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 29 9.9
At1g12860.1 68414.m01494 basic helix-loop-helix (bHLH) family pr... 29 9.9
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 29 9.9
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 37.9 bits (84), Expect = 0.016
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 190 EIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKT-----GSKSKQ 244
E+E E NG +++ +K +K KRK R+E+ +DV K + G +Q
Sbjct: 40 EVEEVPQEVTNGVEEELSNKEKKKKRK-REEKESEKNKKKDVPEKKLEAEDLGEGESEQQ 98
Query: 245 -----GKSVRPTDLSAMLQTLESSIPYHEDYID--NPFSSPSPVTS 283
GK V +A+ ES++P E+ +D F PSP+ S
Sbjct: 99 KVVVTGKGVEEAKYAALKTFAESNLP--ENVLDCCKTFEKPSPIQS 142
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 33.5 bits (73), Expect = 0.35
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 175 KEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPK 234
K+ +D+V G + E + ++ + R KPR +R+ R++R + + + P+
Sbjct: 86 KDRERDKV--REGSRDKESDRERSSKERDRSDRDKPRDRERREREKRSSSRSRREEKEPE 143
Query: 235 VFKTGSKSKQGKSVRP 250
V + GS+ + K P
Sbjct: 144 VVERGSRRHRDKKDEP 159
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 32.3 bits (70), Expect = 0.81
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 165 SALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDT 224
S+ E+ + E + E + E EI+ + + +S ++ ++T++KS + +R
Sbjct: 362 SSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKE 421
Query: 225 NANGRDVSPKVFKTGSKSKQGKSVRPTDLS 254
N N +V T S + Q + TD S
Sbjct: 422 NTNSEKKIEQVESTDSSNTQKGDEQKTDES 451
>At5g56960.1 68418.m07110 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 466
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 159 IPGSSLSALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRK 216
I LS+L+ L E N++ L+GE EIE ND + IRH P T R+
Sbjct: 326 IAREQLSSLQGEISKLLERNREVEAKLAGEREIE-NDLRPEERFNVRIRHIPESTSRE 382
>At3g61620.1 68416.m06906 exonuclease RRP41 (RRP41) identical to
exonuclease RRP41 [Arabidopsis thaliana] GI:6164938
Length = 241
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 196 FENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSA 255
FE N + PR+ + KS+ ++ D + S F TG + +Q R T+LS
Sbjct: 38 FEMGNTKVIAAVYGPREIQNKSQQKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSL 97
Query: 256 ML-QTLESSI 264
++ QT+E+ I
Sbjct: 98 VIRQTMEACI 107
>At3g61670.1 68416.m06911 expressed protein weak similarity to
extra-large G-protein [Arabidopsis thaliana] GI:3201682
Length = 790
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 178 NKDEVVTLSGELEIEHNDFEN-NNGTSKDIRHKPRKT 213
N + V+L+ E+E+ ND+ + N+G SKD + + +K+
Sbjct: 587 NSMKEVSLASEMEVNFNDYSHRNSGVSKDQQQRAKKS 623
>At3g01175.1 68416.m00022 expressed protein
Length = 401
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 161 GSSLSALEKVDDYLKEYNKDEVVTL--SGELEIEHN-DFENNNGTSKDIRHKPRKTKRKS 217
G L E VDD+ EY++++VV L + E+E EH+ D + K++ + +
Sbjct: 137 GKILEEEEDVDDFFYEYDQEDVVELLDAKEVEEEHDVDIFDGVNMEKNLEFEIQTMPIHQ 196
Query: 218 RDERRDTN 225
DE TN
Sbjct: 197 EDEASLTN 204
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 30.3 bits (65), Expect = 3.3
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 180 DEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTG 239
+E V E EHN E K + K + K K+ D++ G D K K
Sbjct: 5 EEKVKNHDNKEEEHNKAEK---AEKKEKKKDKDKKDKNEDDKNGGGEEGEDQEKKSKKKD 61
Query: 240 SKSKQGKSVR----PTDLSAMLQTLESSI 264
K+K+ K+ P L LQ +E I
Sbjct: 62 KKAKKEKNPEDKKDPEKLKMKLQKIEEKI 90
>At1g70100.2 68414.m08066 expressed protein
Length = 482
Score = 30.3 bits (65), Expect = 3.3
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 204 KDIRHKPRKTKRKSRDERRDTNANGRDVSPK--VFKTGSKSKQGKSVRPTDLSAMLQTLE 261
KDI + K+ +KS D+ + T+ +G+D +PK + K + + G + + A E
Sbjct: 369 KDIVRRAFKSFQKSFDQMKSTD-DGQDTAPKQVLAKATAVQRLGTTGQKNVRLAKSDGTE 427
Query: 262 SSIPYHEDYIDNPFSSPSPVTSPNDERLDRFGARRTEKIYLQGGGTFTAVSR 313
P + + S S T+ + R G R E+I+LQ A+S+
Sbjct: 428 RKGP--NSHRSSSVVSKSNGTAEKQKDPSRLGTRAVERIHLQAKPKKQAMSK 477
>At3g62900.1 68416.m07066 expressed protein ; expression supported by
MPSS
Length = 1401
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 187 GELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGK 246
G+ +H+ N++ K + ++K KS+ R D+ R + K++ S+
Sbjct: 1014 GKQSSDHHRRSNDSLAKKSGKGSSSRSKEKSQSIRSDSRDGPRHIEKKIYDGSPDSRADM 1073
Query: 247 SVRP 250
VRP
Sbjct: 1074 IVRP 1077
>At2g42190.1 68415.m05221 expressed protein ; similar to
GP|9826|X07453
Length = 141
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 171 DDYLKEYNKDEVVTLSGELEIEHNDFENNNG--TSKDIRHKPRKTKRKSRDERRDTNANG 228
DD+ +E +D+ + ++E+E D E ++G TSKD++ + RK S + + NG
Sbjct: 42 DDFEEEEEEDDEEMVE-KMEVEDEDEEIDDGSVTSKDLKERKRKMSNGSNTDLTE-EENG 99
Query: 229 RDVSP 233
P
Sbjct: 100 LGSKP 104
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 188 ELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKS 247
E E E + +SKD R + + S D +R + + R VSP ++ K S
Sbjct: 797 EKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSS 856
Query: 248 VRPTD 252
+D
Sbjct: 857 DESSD 861
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 188 ELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKS 247
E E E + +SKD R + + S D +R + + R VSP ++ K S
Sbjct: 767 EKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSS 826
Query: 248 VRPTD 252
+D
Sbjct: 827 DESSD 831
>At4g38550.1 68417.m05458 expressed protein
Length = 612
Score = 29.1 bits (62), Expect = 7.5
Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 16/144 (11%)
Query: 172 DYLKEYNKDEVVTLSGELEIE--HNDFENNNGTSKDIRHKPRKTKRKSRDE--RRDTNAN 227
D+ +++ ++ + +S E E + + + + K + +R+ +D DT +N
Sbjct: 92 DHRRDHGRERMEAMSYEPETNAPSSPYHPAGNRTPERPRKSTEYRREHQDRMYEADTRSN 151
Query: 228 G------RDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESSIPYHEDYIDNPFSSPSPV 281
R SP F T + + + + + MLQ P+H P S SP
Sbjct: 152 ASPFHPFRSPSPSPFHTPDRRRDHYDMYEPEANTMLQNSAPGSPFH------PAGSRSPP 205
Query: 282 TSPNDERLDRFGARRTEKIYLQGG 305
+R + + E +Y Q G
Sbjct: 206 PYRTPDRRSNYDKEQFEDLYEQDG 229
>At3g46220.1 68416.m05003 expressed protein
Length = 530
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 204 KDIRHKPRKTKRKSRD----ERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQT 259
+D R K ++ ++K RD ++ D+ A G+ K K+++ ++ P D M +
Sbjct: 167 EDARPKSKRNQKKGRDSSSSQKLDSKAGGK-------KESVKAQESNNIIPPDEWVMKKI 219
Query: 260 LESSIPYHEDYIDNPFS 276
++S + +D +NP S
Sbjct: 220 VDSVPEFEDDGTENPDS 236
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 169 KVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRD---TN 225
K+D+ K DE E ND E+ NG ++ + T+ DE D T
Sbjct: 152 KIDEETKR--NDEETENDNTEEENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTE 209
Query: 226 ANGRD 230
NG D
Sbjct: 210 ENGND 214
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 29.1 bits (62), Expect = 7.5
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 209 KPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESSIPYHE 268
K K ++K R ER+ A V K KSK + +P + E E
Sbjct: 9 KKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEV----E 64
Query: 269 DYIDNPFSSPSPVTSPNDERLDRFGARRTEKI 300
+ +P SPSP S ++ + + +E+I
Sbjct: 65 EEEKSPSPSPSPKKSKESKKKHKRSSDESEEI 96
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 175 KEYNKDEVVTLSGELEIEHNDFENNNGTSKD--IRHKPRKTKRKSRDERRDTNANGRDVS 232
K+ +DE L E D E+ + + I +P+K K+K +R DT+ +G D +
Sbjct: 22 KKRARDEAKKLKQPAMEEEPDHEDGDAKENNALIDEEPKKKKKKKNKKRGDTD-DGEDEA 80
Query: 233 PKVFKTGSKSKQGKSVR 249
+ K K+ K ++
Sbjct: 81 VAEEEPKKKKKKNKKLQ 97
>At5g26720.1 68418.m03167 expressed protein
Length = 134
Score = 28.7 bits (61), Expect = 9.9
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 192 EHNDFENNNGTSKDIRHKPRKTKRKS--RDERRDTNANGRDVSPKVFKTGSKSKQGKSVR 249
E N ++N+ +K K +K K + D+ + + V K G K+ KS +
Sbjct: 12 EQNRVDDNDTKTKTTTRKKKKKKDVTIVDDDDNQFDTTNQLVKSKNRFLGKFRKKPKSPK 71
Query: 250 PTDLSAMLQTLESSIPYHEDYIDNPFSSPSPVTSPNDER 288
S P + D+ S SPV+ PNDER
Sbjct: 72 RWSGSRKGGCFRVMRPRRREGGDDDSSVSSPVSDPNDER 110
>At4g02800.1 68417.m00380 expressed protein similar to A. thaliana
hypothetical protein T6B20.12 (1946366)
Length = 333
Score = 28.7 bits (61), Expect = 9.9
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 165 SALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDT 224
+AL+ V + K + E+ L L+ + + ++ K +K K +S E+ +
Sbjct: 106 NALQGVRELAKPPSYSEI--LHSNLKADQIQRQQKEEDEEEEESKGKKRKHESDVEQTED 163
Query: 225 NANGRDVSPKVFKTGSKSKQ---GKSVRPTDLSAMLQTLESSIPYHED 269
++N + PK K K+K + + L+ L+T++S + + ++
Sbjct: 164 SSNEEEKRPKERKIMKKAKNIAISMAAKANSLARELKTIKSDLSFIQE 211
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 192 EHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPT 251
+ D + + KD K+K+K +++++D +G + FK K +Q K
Sbjct: 140 DDGDDGHKKHSGKDYDDGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDD 199
Query: 252 D 252
D
Sbjct: 200 D 200
>At3g24340.1 68416.m03056 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P41410 DNA
repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1132
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 175 KEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPK 234
K Y DEVV+LS + E + E GT D R + R S + D +AN D S
Sbjct: 229 KTYVSDEVVSLSSSSDDEEDPLE-ELGT--DSREEVSGEDRDSGESDMDEDANDSDSSDY 285
Query: 235 VFKTGSKS 242
V ++ S
Sbjct: 286 VGESSDSS 293
>At1g65120.2 68414.m07382 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1147
Score = 28.7 bits (61), Expect = 9.9
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 174 LKEYNKDE---VVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERR-------- 222
LK Y +DE +V + + ++ E+ + ++ K K+K+R +R
Sbjct: 713 LKRYQRDELDEIVDMDAKTKLAAAQAEHLSEEKQEKGKKSGSNKKKNRSNKRTSASMSKD 772
Query: 223 DTNANGRDVSPKVFKTGSKSKQGKSVRPTD-LSAMLQTLESS 263
D + + ++ PKV KS + S+ P D LS+ LE S
Sbjct: 773 DVHESSVNLEPKVTPPSPKSTEEDSMEPEDTLSSERGRLEIS 814
>At1g65120.1 68414.m07383 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1121
Score = 28.7 bits (61), Expect = 9.9
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 174 LKEYNKDE---VVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERR-------- 222
LK Y +DE +V + + ++ E+ + ++ K K+K+R +R
Sbjct: 713 LKRYQRDELDEIVDMDAKTKLAAAQAEHLSEEKQEKGKKSGSNKKKNRSNKRTSASMSKD 772
Query: 223 DTNANGRDVSPKVFKTGSKSKQGKSVRPTD-LSAMLQTLESS 263
D + + ++ PKV KS + S+ P D LS+ LE S
Sbjct: 773 DVHESSVNLEPKVTPPSPKSTEEDSMEPEDTLSSERGRLEIS 814
>At1g44780.1 68414.m05130 expressed protein ; expression supported
by MPSS
Length = 471
Score = 28.7 bits (61), Expect = 9.9
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 167 LEKVD-DYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTN 225
LEK D D K + K+ +V E ++ EN+ T ++ P K + +E N
Sbjct: 60 LEKCDLDVYKSFVKEHLVKCLEEAG-NNDTSENSQETEREDDEIPTKEVAEQSEEHEPMN 118
Query: 226 ANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESSIPYHEDYI 271
G + + K K K K D+ L+ S I + + I
Sbjct: 119 DAGEENTSKREAKDVKGKGNKETLQRDIKRALRKRASYIKANSETI 164
>At1g36060.1 68414.m04481 AP2 domain-containing transcription
factor, putative similar to AP2 domain transcription
factor GI:4567204 from [Arabidopsis thaliana]
Length = 314
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 207 RHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLSAMLQTLESSIPY 266
+++P KT+R SR + ++ S +GS G +D+ E +P+
Sbjct: 234 KNQPGKTERTSRKRAKAAASSAEQPSAPQQHSGSGESDGSGSPTSDVMVQEMCQEPEMPW 293
Query: 267 HEDYI 271
+E+++
Sbjct: 294 NENFM 298
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 192 EHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGSKSK 243
E N E++NGT ++ T++KS + +T + S VF G +++
Sbjct: 158 EENKSEDSNGTEENAGESEENTEKKSEENAGETE-ESTEKSKDVFPAGDQAE 208
>At1g12860.1 68414.m01494 basic helix-loop-helix (bHLH) family
protein / F-box family protein contains Pfam profiles:
PF00646 F-box domain, PF00010 helix-loop-helix
DNA-binding domain
Length = 828
Score = 28.7 bits (61), Expect = 9.9
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 182 VVTLSG-ELEIEHNDFENNNGTSKDIRHKPRKTKRKSRDERRDTNANGRDVSPKVFKTGS 240
++ +SG E + ++ NN G K + K +R+ R + D R V PK+ K
Sbjct: 617 IIDISGLNYESDDHNTNNNKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 676
Query: 241 KSKQGKSVRPTDLSAMLQTLESSIPYHEDYIDNPFSSPS 279
S G ++ L +LQ + H + P SS S
Sbjct: 677 ASILGDAI--DYLKELLQRIND---LHTELESTPPSSSS 710
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 28.7 bits (61), Expect = 9.9
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 157 FEIPGSSLSALEKVDDYLKEYNKDEVVTLSGELEIEHNDFENNNGTSKDIRHKPRKTKRK 216
FEI G L+ EK D L K + + + E ++ ++ +N + K +K RK
Sbjct: 495 FEIEGEELTEKEKND--LAAIRKKKALLIE-ESRLKKSNAQNRAAVPRKF-DKDKKFTRK 550
Query: 217 SRDERRDTNANGRDVSPKVFKTGSKSKQGKSVRPTDLS 254
R+ ++ G D S + + SKS+ K R DLS
Sbjct: 551 RMG--RELSSLGLDPSSALNRARSKSRGRKRERYDDLS 586
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,710,136
Number of Sequences: 28952
Number of extensions: 480859
Number of successful extensions: 1571
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1550
Number of HSP's gapped (non-prelim): 39
length of query: 522
length of database: 12,070,560
effective HSP length: 84
effective length of query: 438
effective length of database: 9,638,592
effective search space: 4221703296
effective search space used: 4221703296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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