GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001295-TA|BGIBMGA001295-PA|undefined
         (161 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q399X9 Cluster: Short-chain dehydrogenase/reductase SDR...    33   3.1  
UniRef50_A0TGN0 Cluster: Putative uncharacterized protein; n=1; ...    33   3.1  
UniRef50_Q7PNQ7 Cluster: ENSANGP00000007087; n=1; Anopheles gamb...    32   7.1  
UniRef50_Q8NQ69 Cluster: Putative uncharacterized protein Cgl157...    31   9.4  
UniRef50_Q5H322 Cluster: Putative uncharacterized protein; n=4; ...    31   9.4  

>UniRef50_Q399X9 Cluster: Short-chain dehydrogenase/reductase SDR;
           n=23; Proteobacteria|Rep: Short-chain
           dehydrogenase/reductase SDR - Burkholderia sp. (strain
           383) (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086
           / R18194))
          Length = 328

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 12/74 (16%)

Query: 4   LPWRSHMHGVFRAEVGDNHLGRCNITSHLSVHGQLRAAARALHILGILTHKTPSLVSRAH 63
           LP R H H  F  + G NHLG   +T HL     LRAA RA         +  ++ S  +
Sbjct: 106 LPLR-HTHDGFEMQFGTNHLGHFALTGHLL--PALRAARRA---------RVVTMSSGLN 153

Query: 64  RSGRRRTTLCHCEH 77
           R GR R      EH
Sbjct: 154 RGGRIRVDDLRAEH 167


>UniRef50_A0TGN0 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia ambifaria MC40-6|Rep: Putative
           uncharacterized protein - Burkholderia ambifaria MC40-6
          Length = 135

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 35  HGQLRAAARALHILGILTHKTPSLVSRAHRSG-RRRTTLCHCEHG-TREQQDGRHALCSP 92
           H   R  A +  +  + TH  P  +SR  R+G RRR T   C  G  R  + GR A  + 
Sbjct: 49  HDASRVPASSHRVAAVATHHIPFRLSRWRRAGRRRRRTALVCRGGPDRNSRSGRAARIAR 108

Query: 93  MHWRQCARGPGAQQLTG 109
           +  R CA      Q  G
Sbjct: 109 IVMR-CALAAAQYQPAG 124


>UniRef50_Q7PNQ7 Cluster: ENSANGP00000007087; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000007087 - Anopheles gambiae
           str. PEST
          Length = 2410

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 38  LRAAARALHILGILTHKTPSLVSRAHRSGRRRTTLCHC 75
           L A A+ LH+ G L H T SL+  A  S  +   L HC
Sbjct: 177 LHATAKELHLDGSLVHSTKSLLVSASLSDAQAKVLRHC 214


>UniRef50_Q8NQ69 Cluster: Putative uncharacterized protein Cgl1570;
           n=1; Corynebacterium glutamicum|Rep: Putative
           uncharacterized protein Cgl1570 - Corynebacterium
           glutamicum (Brevibacterium flavum)
          Length = 119

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 51  LTHKTPSLVSRAHRSGRRRTTLCHCEHG 78
           LT K P L SR HR  RRR  +C C  G
Sbjct: 77  LTRKRPHLASRCHRRNRRR-EVCTCRWG 103


>UniRef50_Q5H322 Cluster: Putative uncharacterized protein; n=4;
           Xanthomonas oryzae pv. oryzae|Rep: Putative
           uncharacterized protein - Xanthomonas oryzae pv. oryzae
          Length = 398

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 25  RCNIT-SHL-SVHGQLRAAARALHILGILTHKTPSL--VSRAH---RSGRRRTTLCHCEH 77
           RC +   HL +  G   AAAR   +  ++ H+TP L  + R H    SG        C  
Sbjct: 63  RCTLAYRHLFTCGGGPAAAARIQPLYPLIVHETPFLPQLERDHSPRHSGDGDAPTQGCAR 122

Query: 78  GTREQQDGRHALCSPMHWRQCARGPG 103
            T  Q+ G  A  S  HWR C   PG
Sbjct: 123 AT--QRCGPRAGDSAAHWRSCRSLPG 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.326    0.136    0.453 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,090,468
Number of Sequences: 1657284
Number of extensions: 5259078
Number of successful extensions: 12156
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12155
Number of HSP's gapped (non-prelim): 5
length of query: 161
length of database: 575,637,011
effective HSP length: 94
effective length of query: 67
effective length of database: 419,852,315
effective search space: 28130105105
effective search space used: 28130105105
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 68 (31.5 bits)