Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001294-TA|BGIBMGA001294-PA|undefined
(622 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11622| Best HMM Match : TPR_2 (HMM E-Value=2.2) 169 6e-42
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 83 5e-16
SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065) 48 2e-05
SB_17729| Best HMM Match : TPR_2 (HMM E-Value=0.41) 45 2e-04
SB_16002| Best HMM Match : Clathrin (HMM E-Value=1.1) 44 4e-04
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.056
SB_5317| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.17
SB_18599| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.39
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 33 0.52
SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.69
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.91
SB_43700| Best HMM Match : SRCR (HMM E-Value=0) 30 6.4
SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21) 30 6.4
SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.4
SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0) 29 8.4
>SB_11622| Best HMM Match : TPR_2 (HMM E-Value=2.2)
Length = 299
Score = 169 bits (411), Expect = 6e-42
Identities = 78/156 (50%), Positives = 116/156 (74%), Gaps = 2/156 (1%)
Query: 198 KVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVH 257
KV LL + SP +H QYAKA+EA+G+Y +A K+Y A+DY+ IR+NLD L++ +EAV
Sbjct: 120 KVGELLNHVTSPKLHAQYAKAREADGKYREAAKAYEAAKDYDNVIRINLDFLQNPEEAVR 179
Query: 258 LVQETKSVQGAKMVANYFQNSDDSSSAIKFLVMSLCYDDAFQLARKNGKLQLYGEILIQT 317
+V+ET+SV+GAKMVA +FQN D +SAI+FLV+S C D+AFQLA+ + +++ Y +I+
Sbjct: 180 IVKETQSVEGAKMVAKFFQNLGDFASAIQFLVLSKCNDEAFQLAQTHNQMEQYADII--G 237
Query: 318 SQARSEDFKSLALHFEGEKNHLLAGKFYFHAADYNR 353
A ED+ S+AL+FE +K H LAGKFY ++ +++
Sbjct: 238 DDASKEDYSSIALYFENQKQHFLAGKFYLKSSQFSK 273
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 83.4 bits (197), Expect = 5e-16
Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Query: 469 SYIL-VRTHVRRGNHELAALLLLRIADEVTFFPLPQHQVSILTSTVIECSRAGLKHQAHR 527
SYI + HV+RG+H A +L+R+A+ ++ FP H V ILTSTVIEC R+GL++ +
Sbjct: 254 SYIACTKLHVKRGDHTKGARMLIRVANNISKFP--SHIVPILTSTVIECHRSGLRNSSFS 311
Query: 528 WARALMQPELRSQIDPKYSKKIE 550
+A LM+PE R +ID KY KKIE
Sbjct: 312 YAAMLMRPEYRQKIDLKYKKKIE 334
Score = 32.7 bits (71), Expect = 0.91
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 168 KQYSHAAALYDHAGNTERAASLYIKLKSW 196
+QYS +A LY+ ++AA++Y+K K+W
Sbjct: 146 RQYSESALLYEKGQYWDKAAAVYMKTKNW 174
>SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065)
Length = 1171
Score = 48.4 bits (110), Expect = 2e-05
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 154 VTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKV------------EA 201
VTL +E L +KQ A Y AG + +A I+ + W K E
Sbjct: 354 VTLEEEWGDHLVSQKQLDAAINHYIEAGCSVKAIEAAIQARQWNKAVQIVELQDDTVAER 413
Query: 202 LLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDI-DEAVHLVQ 260
+I +Q K E+EG+ A YL+A+D++AA+ N+ + D+ +EA + +
Sbjct: 414 YYHQIAHHYAQVQEYKEMESEGQLRQAEHHYLEAKDWKAAV--NMYRTSDMWEEAYRVSK 471
Query: 261 ETKSVQGAKMVANYFQNSDDSSSAIKFLVMSLCYDDAFQLARKN 304
++ AK VA + S SA+K L + A A +N
Sbjct: 472 QSGGPNAAKQVAYLWAKSLGGDSAVKLLTKFGLLEAAIDYAAEN 515
Score = 33.5 bits (73), Expect = 0.52
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 205 KINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHLVQE 261
K P IH++YA E EG+Y +A + ++KA + A+ + + D D A + ++
Sbjct: 530 KHKMPDIHLKYAMFLEDEGKYKEAEEQFVKASRPKEAVLMYVHN-HDWDSAQRVAEQ 585
>SB_17729| Best HMM Match : TPR_2 (HMM E-Value=0.41)
Length = 1234
Score = 44.8 bits (101), Expect = 2e-04
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 7/182 (3%)
Query: 161 AQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKE 220
A+ LE S A Y+ + +T R + L ++EA + K + +A+ E
Sbjct: 248 AKHLESMGNMSAAIVNYEKS-DTHRFEVPRMLLDDPHQLEAYILKTKDKELRKWWAQYME 306
Query: 221 AEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSDD 280
+ AL+ Y A+D + +R+ ++++A + ET +A F+N D+
Sbjct: 307 STSEMETALQFYEAARDNLSLVRVYC-YCGNLEKAAEICNETGDRAACYHLARQFENQDN 365
Query: 281 SSSAIKFLVMSLCYDDAFQLARKNGKLQLYGEILIQTSQARSEDFKSLALHF-EGEKNHL 339
AI F + CY +A +LA K++L Q S +++ LH + HL
Sbjct: 366 VKDAIHFYTRAHCYSNAIRLA----KVRLCANSTAMYEQYSSRYVRTVQLHLCANSQLHL 421
Query: 340 LA 341
A
Sbjct: 422 CA 423
>SB_16002| Best HMM Match : Clathrin (HMM E-Value=1.1)
Length = 977
Score = 44.0 bits (99), Expect = 4e-04
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 161 AQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKE 220
A+ LE S A Y+ + +T R + L ++EA + K + +A+ E
Sbjct: 399 AKHLESMGNMSAAIVNYEKS-DTHRFEVPRMLLDDPHQLEAYILKTKDKELRKWWAQYME 457
Query: 221 AEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSDD 280
+ AL+ Y A+D + +R+ ++++A + ET +A F+N D+
Sbjct: 458 STSEMETALQFYEAARDNLSLVRVYC-YCGNLEKAAEICNETGDRAACYHLARQFENQDN 516
Query: 281 SSSAIKFLVMSLCYDDAFQLAR 302
AI F + CY +A +LA+
Sbjct: 517 VKDAIHFYTRAHCYSNAIRLAK 538
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 36.7 bits (81), Expect = 0.056
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 23/258 (8%)
Query: 89 AHHLELTADYHEAL-ANYEKSIITENLDDAKVREHNRKCEAGIARTAIRCGDVMRGVTTA 147
AH+ + D EA+ A ++ T + K+R+ K + G AR + +
Sbjct: 1581 AHNQQKITDIEEAVNARVNEAEATTSDLQTKLRKAKEKIKQGSARQEEQ---TKKYKAYQ 1637
Query: 148 MKLADDVTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSW-LKVEALLPKI 206
K DV L+E Q LE+E + D G+ +R L +KL++ +A+ KI
Sbjct: 1638 EKREKDVAELREKVQSLEKELMETSEKLREDLRGSEKREEELKLKLEAGESNNQAIDKKI 1697
Query: 207 NSPSIHIQ-----YAKAKEAEGRYHDALKSYLKA--QDYE---AAIRLNLD-KLEDIDE- 254
S Q AKA+EA LKS + Q YE +A + LD K+++++
Sbjct: 1698 AELSAEKQEIIQTSAKAEEAFKIQIHELKSQFETTNQTYENELSAAKQELDNKIKELESE 1757
Query: 255 ---AVHLVQETKSVQGAKMVANYFQNSDDSSSAIKFLVMSLCYDDAFQLARKNGKLQLYG 311
A+ + E Q VA + ++ S++K + + ++ R L G
Sbjct: 1758 KETALEKMSEDMQKQSRSRVAEMKKKAEAKISSVKNQLTTQLESKVNEITRLKANL---G 1814
Query: 312 EILIQTSQARSEDFKSLA 329
E+ + +SE K LA
Sbjct: 1815 EVEKNMEELKSEHSKELA 1832
>SB_5317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 35.1 bits (77), Expect = 0.17
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 130 IARTAIRCGDVMRGVTTAMKLADDVTLLKECAQLLEEEK 168
+AR AIR GD+ RGV A K + L KECA +LE K
Sbjct: 1 MARMAIRVGDIRRGVQYATK-SPGRQLKKECAAILESMK 38
>SB_18599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 33.9 bits (74), Expect = 0.39
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 205 KINSPSIHIQYAKAKEAEGRYHDALKSYLKAQD 237
+ N PS+ Q AKA+ EG +A+ SY+KA D
Sbjct: 926 RCNEPSVWSQLAKAQLQEGMIKEAIDSYIKADD 958
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 33.5 bits (73), Expect = 0.52
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Query: 222 EGRYHDALKSYLKAQDYEAAIRL--NLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSD 279
+G++HDA K Y K + E A+ + +L + E E + Q K A + + ++
Sbjct: 358 KGKFHDAAKLYKKTSNEEKAMEMFSDLRQFEYAKEFLGASDPKNVKQLIKKQAQWCETTN 417
Query: 280 DSSSAIKFLVMSLCYDDAFQLARKNGKLQLYGEILIQTSQARSEDFKSLALHFEGEKNHL 339
D +A + + A ++ +NG + ++ ++A +E A F+ H
Sbjct: 418 DPKAAADMFLTAGENMKAIEIIGENGWIDKLLDVGRNLNKADTECIGRCAHFFKQLDQHA 477
Query: 340 LAGKFYFHAAD 350
A + Y D
Sbjct: 478 YAAEMYVKMGD 488
Score = 31.5 bits (68), Expect = 2.1
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 153 DVTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKV 199
D + CA ++ Q+++AA +Y G+T+ L++ + W +V
Sbjct: 459 DTECIGRCAHFFKQLDQHAYAAEMYVKMGDTKALVQLHVDTRHWDEV 505
>SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 33.1 bits (72), Expect = 0.69
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 24/172 (13%)
Query: 172 HAAALYDHA-GNTERAASLYIKL---KSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHD 227
H Y+ A G+++ A LY K + K L+ K H Q K +EA G Y +
Sbjct: 377 HQQGKYEEAIGHSKEALRLYQKTSDDQGQGKANLLIGKT-----HYQQGKYEEARGHYKE 431
Query: 228 ALKSYLKAQDYEAAIRLNLD---------KLED----IDEAVHLVQETKSVQGAKMVANY 274
AL+ Y K+ D + + +L K E+ EA+ L Q+T QG
Sbjct: 432 ALRLYQKSSDDQGQGKAHLQIGNTHHQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLL 491
Query: 275 FQNSDDSSSAIKFLVMSLCYDDAFQLARKNGKLQLYGEILIQTSQARSEDFK 326
N+ + K+ Y +A +L +K +Q GE ++ + + K
Sbjct: 492 IGNTHNQQG--KYEEARGYYKEALRLYQKTSDVQGQGEAHLRIGKTHYQQGK 541
Score = 31.1 bits (67), Expect = 2.8
Identities = 42/152 (27%), Positives = 56/152 (36%), Gaps = 9/152 (5%)
Query: 87 QHAHHLELTADYHEALANYEKSIITENLDDAKVREHNRKCEAGIARTAIRCGDVMRGVTT 146
Q + E Y EAL Y+KS + A ++ N + G AI G +
Sbjct: 418 QQGKYEEARGHYKEALRLYQKSSDDQGQGKAHLQIGNTHHQQGKYEEAI--GHYKEALRL 475
Query: 147 AMKLADDVTLLKECAQLLEEEKQYSHAAALYDHA-GNTERAASLYIKLKSWLKVEALLPK 205
K +DD K A LL Y+ A G + A LY K +
Sbjct: 476 YQKTSDDQGQGK--AHLLIGNTHNQQGK--YEEARGYYKEALRLYQKTSDVQGQGEAHLR 531
Query: 206 INSPSIHIQYAKAKEAEGRYHDALKSYLKAQD 237
I H Q K +EA G Y +AL+ Y K D
Sbjct: 532 IGKT--HYQQGKYEEAIGHYKEALRLYQKTSD 561
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 217 KAKEAEGRYHDALKSYLKAQDYEAAI-RLNLDKLEDIDE 254
K+K+ E D+++ YL+A EA+ RL LD L+D++E
Sbjct: 276 KSKKTEVNREDSIEQYLEALQQEASTSRLKLDPLQDLNE 314
>SB_43700| Best HMM Match : SRCR (HMM E-Value=0)
Length = 967
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 17 VWAL--EDAAHVEDLSVLCGMLCACVGQGAAAARWAEGS 53
VW +D+ + D V+CGML GQ +A + +GS
Sbjct: 215 VWGTVCDDSWDLNDAKVVCGMLGYVAGQAVGSAHFGQGS 253
>SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21)
Length = 928
Score = 29.9 bits (64), Expect = 6.4
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 190 YIKLKSWLKVEALLPKI-NSPSIHIQ-YAKAKEAEGRYHDALKS-------YLKAQDYEA 240
++ L WL AL ++ S+H++ Y K K A +Y + LK Y K ++Y A
Sbjct: 465 HVSLYQWLIDNALTDRLLEIKSVHLEAYLKHKTA-AQYPNDLKMLDLLWRHYEKTKNYAA 523
Query: 241 AIRLNLDKLEDIDEA-VHLVQETKSVQGAKMVANYFQNSDDSSSAIKFL 288
A R+ L KL + + V LVQ + + A M A SS +FL
Sbjct: 524 AARI-LSKLAERESGDVSLVQRLEYLSRAIMSAKSSNLRTSSSKEGEFL 571
>SB_16224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1127
Score = 29.9 bits (64), Expect = 6.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 184 ERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSY--LKAQDYEAA 241
++A ++ K K W K + ++P + S KAKE R +K+ L+++ EA
Sbjct: 627 KQANAVKSKGKQWSKGKGVVPGVLSEG------KAKEGLERARQLIKNMRSLESKAAEAK 680
Query: 242 IRLNLDKLEDIDEAVHLVQETKSVQGAK 269
+K E + EA TKS +G+K
Sbjct: 681 ASTETEKPERLHEAAKCPTSTKSKEGSK 708
>SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 845
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 211 IHIQYAKAKEAEGRYHDALKSYLKAQD 237
IH Q K +EA G Y +AL+ Y K D
Sbjct: 400 IHYQQGKYEEAIGHYKEALRLYQKTSD 426
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 211 IHIQYAKAKEAEGRYHDALKSYLKAQD 237
IH Q K +EA G Y +AL+ Y K D
Sbjct: 600 IHYQQGKYEEAIGHYKEALRLYQKTSD 626
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,355,455
Number of Sequences: 59808
Number of extensions: 541851
Number of successful extensions: 2088
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2042
Number of HSP's gapped (non-prelim): 43
length of query: 622
length of database: 16,821,457
effective HSP length: 86
effective length of query: 536
effective length of database: 11,677,969
effective search space: 6259391384
effective search space used: 6259391384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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