Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001294-TA|BGIBMGA001294-PA|undefined
(622 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03160.1 68418.m00264 DNAJ heat shock N-terminal domain-conta... 31 3.0
At5g02620.1 68418.m00198 ankyrin repeat family protein contains ... 31 3.0
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 31 3.0
At2g45340.1 68415.m05642 leucine-rich repeat transmembrane prote... 31 3.0
At1g51950.1 68414.m05856 auxin-responsive protein / indoleacetic... 30 5.3
At5g13680.1 68418.m01593 IKI3 family protein weak similarity to ... 29 7.0
At4g13370.1 68417.m02090 expressed protein 29 7.0
At3g56190.1 68416.m06245 alpha-soluble NSF attachment protein 2 ... 29 7.0
At2g17390.1 68415.m02008 ankyrin repeat family protein contains ... 29 7.0
At1g08280.1 68414.m00914 glycosyl transferase family 29 protein ... 29 9.2
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 29 9.2
>At5g03160.1 68418.m00264 DNAJ heat shock N-terminal
domain-containing protein similar to P58 protein, Bos
primigenius taurus, PIR:A56534; similar to p58
(GI:1353270) {Homo sapiens}; contains Pfam PF00226: DnaJ
domain; contains Pfam PF00515: TPR Domain
Length = 482
Score = 30.7 bits (66), Expect = 3.0
Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 6/193 (3%)
Query: 181 GNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKA-KEAEGRYHDALKSYLKAQDYE 239
G + AA L+ + +KV+ ++ + I+ A EA + L+ + + +D E
Sbjct: 45 GQSVDAAELFERASQSIKVKRYSDALDDLNAAIEADPALSEAYFKRASVLRHFCRYEDSE 104
Query: 240 AAIRLNLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSDDSSSAIKFLVMSLCYDDAFQ 299
+ + L+ A + + + A A+ S D + A++F+ + F
Sbjct: 105 NSYQKYLEFKSGDSNAEKELSQLHQAKSALETASTLYESKDIAKALEFVDKVVL---VFS 161
Query: 300 LARKNGKLQLYGEILIQT--SQARSEDFKSLALHFEGEKNHLLAGKFYFHAADYNRAMSH 357
A KL +++ S A SE L + LL G+ Y++ AD++ A H
Sbjct: 162 PACSKAKLLKVKLLMVSKDYSGAISETGYILKEDENNLEALLLRGRAYYYLADHDIAQRH 221
Query: 358 LLKAAGSEEDENE 370
K + + +E
Sbjct: 222 YQKGLRLDPEHSE 234
>At5g02620.1 68418.m00198 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 524
Score = 30.7 bits (66), Expect = 3.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 296 DAFQLARKNGKLQLYGEILIQTSQARSEDF---KSLALHFEGEKNH 338
DAF +A KNG LQ+ ++LI+ + S F K+ ALH + H
Sbjct: 93 DAFHIAAKNGNLQVL-DVLIEANPELSFTFDSSKTTALHTAASQGH 137
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 30.7 bits (66), Expect = 3.0
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 166 EEKQYSHAAALYDHAGNTERAASLYI-KLKSWLKVEALLPKINSPSIHIQYAKAKEAEGR 224
E + Y A A++ +A ++ + ++S + ++ S+ Q AKA+ EG
Sbjct: 1075 EAQLYEEAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLREGL 1134
Query: 225 YHDALKSYLKAQD 237
DA++S+++A D
Sbjct: 1135 VSDAIESFIRADD 1147
>At2g45340.1 68415.m05642 leucine-rich repeat transmembrane protein
kinase, putative
Length = 691
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 205 KINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHLVQETKS 264
K +SP I ++YA + GR + + +Q+ + N LE+I+ A E +
Sbjct: 366 KSSSPLISLEYASGWDPLGRGQSSNNNSALSQEVFESFMFN---LEEIERATQSFSEI-N 421
Query: 265 VQGAKMVANYFQN--SDDSSSAIKFLVMSLCYDD 296
+ G V++ ++ D S +AIK + S C D
Sbjct: 422 LLGKSNVSSVYKGILRDGSVAAIKCIAKSSCKSD 455
>At1g51950.1 68414.m05856 auxin-responsive protein / indoleacetic
acid-induced protein 18 (IAA18) identical to
SP|O24408|AXII_ARATH Auxin-responsive protein IAA18
(Indoleacetic acid-induced protein 18) {Arabidopsis
thaliana}
Length = 267
Score = 29.9 bits (64), Expect = 5.3
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 219 KEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAV--HLVQETKSVQGAKMVANYFQ 276
+E +HD S K ++ + ++L ED DE++ H+ +E K + YF
Sbjct: 21 QERRNWFHDEKNSVFKTEEKKLELKLGPPGEEDDDESMIRHMKKEPKDKSILSLAGKYFS 80
Query: 277 NSDDSSSAIK 286
S +++ K
Sbjct: 81 PSSTKTTSHK 90
>At5g13680.1 68418.m01593 IKI3 family protein weak similarity to
SP|O95163 IkappaB kinase complex-associated protein (IKK
complex-associated protein) (p150) {Homo sapiens};
contains Pfam profile PF04762: IKI3 family
Length = 1319
Score = 29.5 bits (63), Expect = 7.0
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 154 VTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSW---LKVEALLPKINSPS 210
+ +L+ A L +EK++ AA Y E+A+ Y + W L+V AL+
Sbjct: 985 LVVLEAWADHLIDEKRFEDAATTYLCCCKLEKASKAYRECGDWSGVLRVGALMKLGKDEI 1044
Query: 211 IHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHLVQETKSVQGAKM 270
+ + Y +E +AL + EAA ++ L+ DI + L+ + + A
Sbjct: 1045 LKLAYELCEEV-----NAL-----GKPAEAA-KIALEYCSDISGGISLLINAREWEEALR 1093
Query: 271 VANYFQNSDDSSSAIK 286
VA + +DD S +K
Sbjct: 1094 VA-FLHTADDRISVVK 1108
>At4g13370.1 68417.m02090 expressed protein
Length = 673
Score = 29.5 bits (63), Expect = 7.0
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 127 EAGIARTAIRCGDVMRGVTTAMKLADDVTLLKECAQLLEEEKQYSHAAA--LYDHAGNTE 184
EA IRC +++A K+ + + ++ E ++ E+ +YS A+ + + + +
Sbjct: 458 EANANECIIRCLSKFSELSSASKVGNPLRIINEFLKIYEDVMKYSKIASENSFSLSSDQQ 517
Query: 185 RAASLYIK--LKSWLKVEALLPKINSPS 210
SL+++ L + L+V +L+ SPS
Sbjct: 518 NPISLWVEAALATNLEVVSLVKSHESPS 545
>At3g56190.1 68416.m06245 alpha-soluble NSF attachment protein 2 /
alpha-SNAP2 / ASNAP2 identical to alpha-soluble NSF
attachment protein 2 / alpha-SNAP2 SP:Q9SPE6 from
[Arabidopsis thaliana]
Length = 289
Score = 29.5 bits (63), Expect = 7.0
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 178 DHAGNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKAQD 237
D A E+AA+ Y KSW + K+ H++ +A Y +A K Y K
Sbjct: 31 DAADLLEKAANSYKLAKSWDQAGKAYLKL--ADCHLKSDSKHDAANAYAEAAKCYKKVDT 88
Query: 238 YEAAIRLNLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSDDSSSAIKF 287
EAA L ++ + + + + K +A Y+++ AI +
Sbjct: 89 NEAASCLE----RAVNIFCEIGRLNMAARYYKEIAEYYESDQKFEQAIAY 134
>At2g17390.1 68415.m02008 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 344
Score = 29.5 bits (63), Expect = 7.0
Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 141 MRGVTTAMKLADDVTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKVE 200
M+ + M+ + T+ + L ++ Q S + +E+ A ++K +++
Sbjct: 107 MQTMQQVMENPEFRTMAERLGNALVQDPQMSPFLEALGNPAASEQFAERMAQMKEDPELK 166
Query: 201 ALLPKINS--PSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAVHL 258
+L +I++ PS ++Y K+ + +A+ + A AA ++ E+ + VH
Sbjct: 167 PILAEIDAGGPSAMMKYWNDKDVLAKLGEAMGIAVGADQTVAAEPEEAEEGEEEESIVHQ 226
Query: 259 VQETKSVQGAKMVANYFQNSDDSSS 283
V+G K N D+ S
Sbjct: 227 TASLGDVEGLKAALASGGNKDEEDS 251
>At1g08280.1 68414.m00914 glycosyl transferase family 29 protein /
sialyltransferase family protein contains Pfam profile:
PF00777 sialyltransferase (Glycosyltransferase family
29)
Length = 398
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 215 YAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDIDEAV 256
+ K + YH K+ LK DYEA RL D LE+ A+
Sbjct: 342 FGKLNSTKHHYHTNQKAELKLHDYEAEYRLYRD-LENSPRAI 382
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 29.1 bits (62), Expect = 9.2
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 128 AGIARTAIRCGDVMRGVTTAMKLADDVTLLKECAQLLEEEKQYSHAAALYDHAG----NT 183
AG R + C + G +K + +T L +L E+E Q+ A + +HAG N+
Sbjct: 483 AGKGRVSDVCKLLSVGADCTLKSKEGITAL----ELAEKENQFETAQIIREHAGNIQSNS 538
Query: 184 ERAASLYIKLKSWLKVE 200
++A L K + +K E
Sbjct: 539 QQAQDLLDKYMATIKPE 555
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,491,317
Number of Sequences: 28952
Number of extensions: 385562
Number of successful extensions: 1066
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1065
Number of HSP's gapped (non-prelim): 13
length of query: 622
length of database: 12,070,560
effective HSP length: 85
effective length of query: 537
effective length of database: 9,609,640
effective search space: 5160376680
effective search space used: 5160376680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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