Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001294-TA|BGIBMGA001294-PA|undefined
(622 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 33 0.089
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 30 0.83
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 30 0.83
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch... 29 1.9
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 29 1.9
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 29 2.5
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 28 3.4
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 28 3.4
SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyce... 28 3.4
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 28 4.4
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 28 4.4
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 5.9
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 27 7.7
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 33.5 bits (73), Expect = 0.089
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 159 ECAQLLEEEKQYSHAAALYDHAGNTERAASLYIK-LKSWLKVEALLPKINSPSIHIQYAK 217
E A++ E Y A +Y E+A + ++ + S + + + P + + AK
Sbjct: 1050 EIAEIAIENGLYEEAFRIYKIHNKHEQAMKVLVEDIVSLDRAQDYAETVEQPEVWSRLAK 1109
Query: 218 AKEAEGRYHDALKSYLKAQD 237
A+ R DA++SYLKA D
Sbjct: 1110 AQLDGIRIPDAIESYLKADD 1129
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 30.3 bits (65), Expect = 0.83
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 163 LLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKEAE 222
+LE + ++ + GNT L +L ++ E LLPK + +Q AK +
Sbjct: 121 ILESNNKSNNELITKNGYGNTR--LDLLNQLSEYISPEILLPKRRLEHL-LQQAKDYQVS 177
Query: 223 GR-YHDALKSYLKAQDYEA 240
+ YH+ LK++ DY+A
Sbjct: 178 SQVYHNVLKNFSFLSDYKA 196
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 30.3 bits (65), Expect = 0.83
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 213 IQYAKAKEAEGRYHDALKSYLKAQD-YEAAIRL----NLDKLEDIDEAVHLVQETKSVQG 267
++ A +E + ++ D LKS + D Y +++ NL ++ID + +T +V
Sbjct: 209 LEPASLEEYQKQWEDFLKSNNISDDPYTSSVNSFANDNLAHNKNIDPQIFQHSDTDNVVE 268
Query: 268 AKMVAN--YFQNSDDSSSAIKFLVMSLCYDDAFQLARKNGKLQLYGEILIQTSQARSEDF 325
+ Y QN D+SS +K L + +A L + G + +L Q+ + + F
Sbjct: 269 NSLQTEDVYSQNQDESSEVVKELNGIDPFVEAMNLIKNGGSISKAAVLLEQSVKENPQHF 328
Query: 326 KS 327
++
Sbjct: 329 EA 330
>SPBC16D10.01c ||SPBC418.03c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 29.1 bits (62), Expect = 1.9
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Query: 182 NTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAA 241
+ E LY KL + S+ I K +EA+ L+S +A ++
Sbjct: 142 DAEENCELYTKLALQIDATNAEALQTLASMRISQQKIEEAKDALSKCLQSISRAATEDS- 200
Query: 242 IRLNLDKLEDIDEAVHLVQETKSVQGAKMVANYFQNSDDSSSAIKFLVMSLCYDDAFQLA 301
++L V L+ E + + A + Y Q DD I +L+ CY +A L
Sbjct: 201 --VDLPTYAVRTSIVRLLIEVEMHEEAHQLLVYLQKEDDQILDIWYLLGWNCYVEAQNLQ 258
Query: 302 RK-NGKLQLYGEILI 315
+ NG + E+L+
Sbjct: 259 EQGNGSEEEIKELLM 273
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 172 HAAALYDHAGNTERAASLYIKLKSWL-----KVEALLPKINSPSIHIQYAKAKEAEGRYH 226
++ AL N E A LY+ + L EAL N+ +I Y K + + H
Sbjct: 246 YSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSDNALAIDSSYLKGLKVRAKAH 305
Query: 227 DALKSYLKA-QDYEAAIRLN 245
+AL+ + +A +D ++AI L+
Sbjct: 306 EALEKWEEAVRDVQSAIELD 325
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 305 GKLQLYGEILIQTSQARSEDFKSLALHFEGEKNHLLAGKFYFHAADYNRAMS 356
G ++ ++L+ + + F SL +K ++ G+ Y H DYN+A++
Sbjct: 594 GPMKSINDVLVFMLEQTNSTFSSLNRKLYSDK--IIVGQIYDHIKDYNKALA 643
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 28.3 bits (60), Expect = 3.4
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 181 GNTERAASLYIKLKSWLKVEALLPKINSP-------SIHIQYAKAKEAEGRYHDALKSYL 233
GN A S+Y KL++ L+ L + SP ++H + H+A +
Sbjct: 341 GNFRGALSIYQKLRTSLEASQSLSVLYSPGLVGLGDALHYKIQSTGFKSQLLHEAANYWR 400
Query: 234 KAQDYEAAIRL-NLDKLEDIDE--AVHLVQETKSVQGAKMVANYFQNSDDSSSAIKFLVM 290
K Q EA + L L +DE V +Q+ SV + + Q S + V
Sbjct: 401 KQQSCEAKLLLCTRSLLAHLDERAPVSTIQDDMSV-----IDDLLQWKGPISELVSCKVA 455
Query: 291 SLCYDD 296
+LCY D
Sbjct: 456 ALCYLD 461
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 197 LKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKAQDYEAAIRLNLDKLEDID--E 254
L V + L K+ PS Q + AKE E Y K + + +N LED D
Sbjct: 363 LSVVSFLAKMVPPSSFTQKSSAKEEESDKVKGESVYPKPESESYDVEMNGKSLEDSDSLS 422
Query: 255 AVHLVQETKSV 265
++L E K +
Sbjct: 423 ELYLTNEEKKM 433
>SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 851
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 176 LYDHAGNTERAASLYIKLKSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSYLKA 235
L D G+ ER S +S + + ++ ++ I + AK + +G DA+ Y A
Sbjct: 601 LGDIRGDGERTPSFLENHRSLIGLSSVKEYLSK--ITLTAAKQADDQGLLSDAILLYHLA 658
Query: 236 QDYEAAI 242
+DY+AA+
Sbjct: 659 EDYDAAV 665
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 139 DVMRGVTTAMKLADDVTLLKECAQLLEEEKQYSHA 173
D+ + VT A AD+ T++K+ + LE EK+ +H+
Sbjct: 78 DLAKPVTNAGADADEDTIVKDLKKELENEKKANHS 112
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.9 bits (59), Expect = 4.4
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 94 LTADYHEALANYEKSIITENLDDAKVREHNRKCEAGIARTAIRC-GDVMRGVTTAMK-LA 151
++ ++ EA+++Y+KSI LDD+ + H + G+A+ + M+ K
Sbjct: 427 VSGEFAEAISDYQKSIA---LDDSFIYSH---IQLGVAQYKTHAIAESMKTFEDCKKRFP 480
Query: 152 DDVTLLKECAQLLEEEKQYSHAAALYDHAGNTERAASLYIKLKSWLKVEALLPKINSPSI 211
+ + ++L +++++ A +DHA E+ + L + + +P IN
Sbjct: 481 NSSEVYNYFGEILLDQQKFDDAVKNFDHAIELEK--------REHLTIMSAMPLINKALA 532
Query: 212 HIQYAK-AKEAEGRYHDALKS 231
Q+ K +AE AL +
Sbjct: 533 VFQWKKDISQAENLCRQALSA 553
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 192 KLKSWLKVEALLPKINSPSIHIQYAKAKEAEGRYHDALKSY-LKAQDYE 239
KL+SW+K + L+ + P+I K+ + R+ A+ Y L +QD+E
Sbjct: 1879 KLESWVKEKGLVGRGPEPTI----VTPKQYKNRFRKAMDCYILASQDFE 1923
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 198 KVEALLPKINSPSIHIQYAKAKEAEGRYHD-ALKSYLKAQDYEAAIRLNLD-----KLED 251
++E L+ IN+ + Y+ KEA G +D + K +Y A + ++D +L+D
Sbjct: 147 QLEGLIDVINAQTAEQLYSANKEAHGSIYDICFRWRKKLIEYRAFLEASIDFSEEHELDD 206
Query: 252 IDEAVHLVQETKSVQ 266
I E + L +E ++
Sbjct: 207 I-ETIKLFEELNEMK 220
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,220,206
Number of Sequences: 5004
Number of extensions: 74575
Number of successful extensions: 202
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 199
Number of HSP's gapped (non-prelim): 13
length of query: 622
length of database: 2,362,478
effective HSP length: 77
effective length of query: 545
effective length of database: 1,977,170
effective search space: 1077557650
effective search space used: 1077557650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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