GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001293-TA|BGIBMGA001293-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
         (644 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    25   6.2  

>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 25.0 bits (52), Expect = 6.2
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 586 GLADPDTEKR-VANQRKHIEKMLLLRRFSDAW 616
           GL   D +KR V NQR + +   L +RFS A+
Sbjct: 81  GLYPKDPKKRAVVNQRLYFDMGTLYQRFSQAF 112


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,269
Number of Sequences: 2123
Number of extensions: 27132
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 1
length of query: 644
length of database: 516,269
effective HSP length: 68
effective length of query: 576
effective length of database: 371,905
effective search space: 214217280
effective search space used: 214217280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)