Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001293-TA|BGIBMGA001293-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(644 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 186 6e-47
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 186 6e-47
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 186 6e-47
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 43 6e-04
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 38 0.029
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 33 0.82
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 33 0.82
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 33 0.82
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 33 0.82
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 33 0.82
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 33 0.82
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 32 1.4
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 31 1.9
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.5
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 31 2.5
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 31 3.3
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 29 7.7
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 29 7.7
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 186 bits (452), Expect = 6e-47
Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 21/363 (5%)
Query: 3 WDNDGDYLAIITPNSNAVLLWECHANKRLNIETGL---REPPSCLAWAYEEPLLAVGTHK 59
WD +GD LAI N+ + LW+ ++ +E+G +E P+CLAW+ P L +G +
Sbjct: 82 WDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNA 141
Query: 60 GNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILASEDKTLSINNSDGDTLRIISLR 119
GN+ +YNH T++RI ++GKH + + ++ +I S+D TLS+ +G T+ +
Sbjct: 142 GNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTTLEGTTVSTTTTN 201
Query: 120 DTPNDLQVSEMKTDERVAGENTVSLIVGKRTXXXXXXXXPDNPIELAFQQRYGSIVSYKW 179
P ++ + + +G VS+++GK+ D P+ L FQ++YG+I SY+W
Sbjct: 202 GEPTNMDYGSV-NGKGGSGVTMVSVVIGKKILMLAHYNALDEPVNLQFQEKYGNIHSYRW 260
Query: 180 YGDGYXXXXXXXXXXXXXXTHIKEVGEELFQVKNHKDSLTDIAVCN--GQAASCGDGQLK 237
+ DGY H E+G EL ++ L IAV + + GD +K
Sbjct: 261 FNDGYILIGFDRGYIISISAHNNEIGSELVSFLEYRGYLASIAVSTSFNKLLTIGDNMVK 320
Query: 238 L--ISVWNNGEVSGSVMPTGGAERCGWSSDGRLLATSGR-GYLNVYVTTLPPLYATYGTR 294
+ + + + + DG+L+A S + G L+++VT +P L A+Y
Sbjct: 321 VRDLDELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNS 380
Query: 295 ALTLTSLTEVTVYQCIGVEDAPEPINKSEPTALATYALPVEPTLIALGGSHLCCVHGSDA 354
LT+LT+VTV + + E +T L +EPT++ LG +L + +
Sbjct: 381 ICYLTNLTQVTV------------VAEVEKKGSSTLELNIEPTVMGLGPLNLAVANNNTV 428
Query: 355 WFY 357
+FY
Sbjct: 429 FFY 431
Score = 98.3 bits (234), Expect = 1e-20
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 10/258 (3%)
Query: 386 YAAALFEGRAMLHTIEQPDSSQAERECMMFPEPHMQGAKIVDIHLTADFFIFITDQGHVE 445
YAA F R LH I + + + + FPE + + A + LT +F IF T ++
Sbjct: 481 YAAVNFGSRLRLHRIRNSEDNVS----IEFPEAN-RNATLYSYALTENFLIFTTSNNYIV 535
Query: 446 HFGVEEWRTSVRHRAAGALCAAYGDISGTRACLADTARRLLVYCPAAPH--DLCPLREPK 503
+F + EW +R + + + + C D ++Y L +
Sbjct: 536 YFSLSEWAIVSEYRHVVPVRSIFPHPTNVVCCCFDDRLEAMIYSAVDDEVFRLPSVGSSA 595
Query: 504 LFRGVIWDICLSDRNVFIVYTDDKIDTYYYVSNSINGSHVDLVASTSILPGQIPLILFSG 563
++G IW+ D+N F V+ I + I G V V++T + +PL L G
Sbjct: 596 HYKGAIWETFTIDKNTFAVFDSQNIYVFLLSKQHIQGESVIYVSATRLPHAYVPLSLNKG 655
Query: 564 DVYCYASGGSIIKVPLDSHNTSGLADPDTEKRVANQRKHIEKMLLLRRFSDAWLFCDAVD 623
V C S G + V LDSH T + +E + + + + LL+ R+S AW C +
Sbjct: 656 IVTCLMSNGKLSSVLLDSHKTESVISDKSETVIDD---ILTRSLLMHRWSTAWKICIHSN 712
Query: 624 EPDVWRRLGEAAIADLNV 641
+ W + AA+ D +V
Sbjct: 713 DGSHWNQFAMAALLDSDV 730
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 186 bits (452), Expect = 6e-47
Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 21/363 (5%)
Query: 3 WDNDGDYLAIITPNSNAVLLWECHANKRLNIETGL---REPPSCLAWAYEEPLLAVGTHK 59
WD +GD LAI N+ + LW+ ++ +E+G +E P+CLAW+ P L +G +
Sbjct: 82 WDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNA 141
Query: 60 GNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILASEDKTLSINNSDGDTLRIISLR 119
GN+ +YNH T++RI ++GKH + + ++ +I S+D TLS+ +G T+ +
Sbjct: 142 GNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTTLEGTTVSTTTTN 201
Query: 120 DTPNDLQVSEMKTDERVAGENTVSLIVGKRTXXXXXXXXPDNPIELAFQQRYGSIVSYKW 179
P ++ + + +G VS+++GK+ D P+ L FQ++YG+I SY+W
Sbjct: 202 GEPTNMDYGSV-NGKGGSGVTMVSVVIGKKILMLAHYNALDEPVNLQFQEKYGNIHSYRW 260
Query: 180 YGDGYXXXXXXXXXXXXXXTHIKEVGEELFQVKNHKDSLTDIAVCN--GQAASCGDGQLK 237
+ DGY H E+G EL ++ L IAV + + GD +K
Sbjct: 261 FNDGYILIGFDRGYIISISAHNNEIGSELVSFLEYRGYLASIAVSTSFNKLLTIGDNMVK 320
Query: 238 L--ISVWNNGEVSGSVMPTGGAERCGWSSDGRLLATSGR-GYLNVYVTTLPPLYATYGTR 294
+ + + + + DG+L+A S + G L+++VT +P L A+Y
Sbjct: 321 VRDLDELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNS 380
Query: 295 ALTLTSLTEVTVYQCIGVEDAPEPINKSEPTALATYALPVEPTLIALGGSHLCCVHGSDA 354
LT+LT+VTV + + E +T L +EPT++ LG +L + +
Sbjct: 381 ICYLTNLTQVTV------------VAEVEKKGSSTLELNIEPTVMGLGPLNLAVANNNTV 428
Query: 355 WFY 357
+FY
Sbjct: 429 FFY 431
Score = 98.3 bits (234), Expect = 1e-20
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 10/258 (3%)
Query: 386 YAAALFEGRAMLHTIEQPDSSQAERECMMFPEPHMQGAKIVDIHLTADFFIFITDQGHVE 445
YAA F R LH I + + + + FPE + + A + LT +F IF T ++
Sbjct: 481 YAAVNFGSRLRLHRIRNSEDNVS----IEFPEAN-RNATLYSYALTENFLIFTTSNNYIV 535
Query: 446 HFGVEEWRTSVRHRAAGALCAAYGDISGTRACLADTARRLLVYCPAAPH--DLCPLREPK 503
+F + EW +R + + + + C D ++Y L +
Sbjct: 536 YFSLSEWAIVSEYRHVVPVRSIFPHPTNVVCCCFDDRLEAMIYSAVDDEVFRLPSVGSSA 595
Query: 504 LFRGVIWDICLSDRNVFIVYTDDKIDTYYYVSNSINGSHVDLVASTSILPGQIPLILFSG 563
++G IW+ D+N F V+ I + I G V V++T + +PL L G
Sbjct: 596 HYKGAIWETFTIDKNTFAVFDSQNIYVFLLSKQHIQGESVIYVSATRLPHAYVPLSLNKG 655
Query: 564 DVYCYASGGSIIKVPLDSHNTSGLADPDTEKRVANQRKHIEKMLLLRRFSDAWLFCDAVD 623
V C S G + V LDSH T + +E + + + + LL+ R+S AW C +
Sbjct: 656 IVTCLMSNGKLSSVLLDSHKTESVISDKSETVIDD---ILTRSLLMHRWSTAWKICIHSN 712
Query: 624 EPDVWRRLGEAAIADLNV 641
+ W + AA+ D +V
Sbjct: 713 DGSHWNQFAMAALLDSDV 730
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 186 bits (452), Expect = 6e-47
Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 21/363 (5%)
Query: 3 WDNDGDYLAIITPNSNAVLLWECHANKRLNIETGL---REPPSCLAWAYEEPLLAVGTHK 59
WD +GD LAI N+ + LW+ ++ +E+G +E P+CLAW+ P L +G +
Sbjct: 82 WDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIGNNA 141
Query: 60 GNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILASEDKTLSINNSDGDTLRIISLR 119
GN+ +YNH T++RI ++GKH + + ++ +I S+D TLS+ +G T+ +
Sbjct: 142 GNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTTLEGTTVSTTTTN 201
Query: 120 DTPNDLQVSEMKTDERVAGENTVSLIVGKRTXXXXXXXXPDNPIELAFQQRYGSIVSYKW 179
P ++ + + +G VS+++GK+ D P+ L FQ++YG+I SY+W
Sbjct: 202 GEPTNMDYGSV-NGKGGSGVTMVSVVIGKKILMLAHYNALDEPVNLQFQEKYGNIHSYRW 260
Query: 180 YGDGYXXXXXXXXXXXXXXTHIKEVGEELFQVKNHKDSLTDIAVCN--GQAASCGDGQLK 237
+ DGY H E+G EL ++ L IAV + + GD +K
Sbjct: 261 FNDGYILIGFDRGYIISISAHNNEIGSELVSFLEYRGYLASIAVSTSFNKLLTIGDNMVK 320
Query: 238 L--ISVWNNGEVSGSVMPTGGAERCGWSSDGRLLATSGR-GYLNVYVTTLPPLYATYGTR 294
+ + + + + DG+L+A S + G L+++VT +P L A+Y
Sbjct: 321 VRDLDELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNS 380
Query: 295 ALTLTSLTEVTVYQCIGVEDAPEPINKSEPTALATYALPVEPTLIALGGSHLCCVHGSDA 354
LT+LT+VTV + + E +T L +EPT++ LG +L + +
Sbjct: 381 ICYLTNLTQVTV------------VAEVEKKGSSTLELNIEPTVMGLGPLNLAVANNNTV 428
Query: 355 WFY 357
+FY
Sbjct: 429 FFY 431
Score = 98.3 bits (234), Expect = 1e-20
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 10/258 (3%)
Query: 386 YAAALFEGRAMLHTIEQPDSSQAERECMMFPEPHMQGAKIVDIHLTADFFIFITDQGHVE 445
YAA F R LH I + + + + FPE + + A + LT +F IF T ++
Sbjct: 481 YAAVNFGSRLRLHRIRNSEDNVS----IEFPEAN-RNATLYSYALTENFLIFTTSNNYIV 535
Query: 446 HFGVEEWRTSVRHRAAGALCAAYGDISGTRACLADTARRLLVYCPAAPH--DLCPLREPK 503
+F + EW +R + + + + C D ++Y L +
Sbjct: 536 YFSLSEWAIVSEYRHVVPVRSIFPHPTNVVCCCFDDRLEAMIYSAVDDEVFRLPSVGSSA 595
Query: 504 LFRGVIWDICLSDRNVFIVYTDDKIDTYYYVSNSINGSHVDLVASTSILPGQIPLILFSG 563
++G IW+ D+N F V+ I + I G V V++T + +PL L G
Sbjct: 596 HYKGAIWETFTIDKNTFAVFDSQNIYVFLLSKQHIQGESVIYVSATRLPHAYVPLSLNKG 655
Query: 564 DVYCYASGGSIIKVPLDSHNTSGLADPDTEKRVANQRKHIEKMLLLRRFSDAWLFCDAVD 623
V C S G + V LDSH T + +E + + + + LL+ R+S AW C +
Sbjct: 656 IVTCLMSNGKLSSVLLDSHKTESVISDKSETVIDD---ILTRSLLMHRWSTAWKICIHSN 712
Query: 624 EPDVWRRLGEAAIADLNV 641
+ W + AA+ D +V
Sbjct: 713 DGSHWNQFAMAALLDSDV 730
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 43.2 bits (97), Expect = 6e-04
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 20 VLLWECHANKRLNI----ETGLREPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPI 75
V LW ++ + + +T ++ + + W + LLAVGT +G +++ T K+
Sbjct: 416 VYLWSATTSQVIKLCDLGQTNEQDQVTSVQWCDKGDLLAVGTSRGVTQIWDVTTQKKTRE 475
Query: 76 IGKHSKKICCAVWNKDNILILASEDKTL 103
+ HS ++ C WN D I S D+T+
Sbjct: 476 LTGHSSRVGCLAWNADTI-CSGSRDRTI 502
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 1 MEWDNDGDYLAIITPNSNAVLLWECHANKRLNIETGLREPPSCLAWAYEEPLLAV---GT 57
++W D LA N N +L+W N+ + T LAW+ L V GT
Sbjct: 528 LKWSPDKQLLAS-GGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHHHGLLVSGGGT 586
Query: 58 HKGNLALYNHHTTKRIPIIGKHSKKICCAVWNK 90
L +N T + + + S ++C W+K
Sbjct: 587 ADRCLRFWNTLTAQPMQCVDTGS-QVCNVAWSK 618
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 37.5 bits (83), Expect = 0.029
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 39 EPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPII-GKHSKKICCAVWNKDNIL 94
+P SC+ +PLLA+G G++ L+N PI+ H K + C ++ D +L
Sbjct: 61 KPISCVRQCENKPLLAIGYADGSVKLFNQENEDSEPIMFSGHKKAVNCIEFSSDGLL 117
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 32.7 bits (71), Expect = 0.82
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 6 DGDYLAIITPNSNAVLLWECHAN-KRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLAL 64
DG+ L +I ++ V LW+ K L++ET + LA + +E LL GN+ +
Sbjct: 385 DGNTL-LIGGEASTVALWDLTTETKTLDLETD-SQACYALAMSPDEKLLFACLADGNILI 442
Query: 65 YNHHTTKRIPIIGKHSKKICCAVWNKD 91
Y+ H ++ + H C +KD
Sbjct: 443 YDIHNKVKVGTLPGHQDGASCLDLSKD 469
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.82
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 3 WDNDGDYLAIITPNSNAVLLWECHANKRL---NIETGLREPPSCLAWAYEEPLLAVGTHK 59
+ N+G +L + T S V+ + N L N T +C++W+ + LA G+
Sbjct: 499 FSNNGAFL-VATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD 557
Query: 60 GNLALYNHHTTKRIPII--GKHS-KKICCAVWNKDNILILASEDKTLSINN 107
++ ++N + PII G H+ + +W + ++ A +D + N
Sbjct: 558 NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 608
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.82
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 3 WDNDGDYLAIITPNSNAVLLWECHANKRL---NIETGLREPPSCLAWAYEEPLLAVGTHK 59
+ N+G +L + T S V+ + N L N T +C++W+ + LA G+
Sbjct: 499 FSNNGAFL-VATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD 557
Query: 60 GNLALYNHHTTKRIPII--GKHS-KKICCAVWNKDNILILASEDKTLSINN 107
++ ++N + PII G H+ + +W + ++ A +D + N
Sbjct: 558 NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 608
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 32.7 bits (71), Expect = 0.82
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 6 DGDYLAIITPNSNAVLLWECHAN-KRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLAL 64
DG+ L +I ++ V LW+ K L++ET + LA + +E LL GN+ +
Sbjct: 385 DGNTL-LIGGEASTVALWDLTTETKTLDLETD-SQACYALAMSPDEKLLFACLADGNILI 442
Query: 65 YNHHTTKRIPIIGKHSKKICCAVWNKD 91
Y+ H ++ + H C +KD
Sbjct: 443 YDIHNKVKVGTLPGHQDGASCLDLSKD 469
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 32.7 bits (71), Expect = 0.82
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 6 DGDYLAIITPNSNAVLLWECHAN-KRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLAL 64
DG+ L +I ++ V LW+ K L++ET + LA + +E LL GN+ +
Sbjct: 385 DGNTL-LIGGEASTVALWDLTTETKTLDLETD-SQACYALAMSPDEKLLFACLADGNILI 442
Query: 65 YNHHTTKRIPIIGKHSKKICCAVWNKD 91
Y+ H ++ + H C +KD
Sbjct: 443 YDIHNKVKVGTLPGHQDGASCLDLSKD 469
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 32.7 bits (71), Expect = 0.82
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 6 DGDYLAIITPNSNAVLLWECHAN-KRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLAL 64
DG+ L +I ++ V LW+ K L++ET + LA + +E LL GN+ +
Sbjct: 385 DGNTL-LIGGEASTVALWDLTTETKTLDLETD-SQACYALAMSPDEKLLFACLADGNILI 442
Query: 65 YNHHTTKRIPIIGKHSKKICCAVWNKD 91
Y+ H ++ + H C +KD
Sbjct: 443 YDIHNKVKVGTLPGHQDGASCLDLSKD 469
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 461 AGALCAAYG-DISGTRAC--LADTARRLLVYCPAAPHDLCPLREPKLF-RGVIWDICLSD 516
A ALC A D + A + D A+RLL + D+ PLR LF V + C
Sbjct: 1978 ANALCRALSCDQTSQLAVEGIRDNAKRLL-HNSVVEADMTPLRSTTLFVSNVFCNSCSQA 2036
Query: 517 RNVFIVYTDDKIDTYYYVSNSINGSHVDLV 546
NVF+ TD+ I T + +N +D++
Sbjct: 2037 SNVFLSSTDE-ILTCATCQSKLNSDVIDMM 2065
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 31.5 bits (68), Expect = 1.9
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Query: 207 ELFQVKNHKDSLTDIAVCNGQAASCGDGQLKLISVWNNGEVSGSVMPTGGAERCG-WSSD 265
EL + K S + C G A C D LI N V + P A CG W+ D
Sbjct: 106 ELVNDRGVKVSDLSWSPCGGSALICYDDNFVLIGSANGQRVWSNSFPLPAAVTCGVWAPD 165
Query: 266 GRLLATSGRGYLNVYVTTLPPLYATYGTRALTLTSLTEV 304
R L G+ + L +R+ T LT++
Sbjct: 166 SRQLVL---GFSTGTIQVLSNAGVNITSRSFTEDKLTQM 201
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 31.1 bits (67), Expect = 2.5
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 8 DYLAIITPNSNAVLLWECHANKRLNIET-GLREPPSCLAWAYEEPLLAVGTHKGNLALY- 65
DY + + + V +W+ N R + T L P + +A + P++A+ ++ +Y
Sbjct: 376 DYRIVSSSDDATVKIWDLR-NMRTPLATIRLSSPANRVAISKSHPVIAIPMDNRHVRIYD 434
Query: 66 -NHHTTKRIPIIGKHSKKICCAVW---NKDNILILASEDKTLS 104
N + R+P H + + C W + N L+ A D+ ++
Sbjct: 435 LNGNRLPRMPNRRCHERMVTCCAWLDEHPANNLLTAGFDRMVA 477
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 31.1 bits (67), Expect = 2.5
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 8 DYLAIITPNSNAVLLWECHANKRLNIET-GLREPPSCLAWAYEEPLLAVGTHKGNLALY- 65
DY + + + V +W+ N R + T L P + +A + P++A+ ++ +Y
Sbjct: 374 DYRIVSSSDDATVKIWDLR-NMRTPLATIRLSSPANRVAISKSHPVIAIPMDNRHVRIYD 432
Query: 66 -NHHTTKRIPIIGKHSKKICCAVW---NKDNILILASEDKTLS 104
N + R+P H + + C W + N L+ A D+ ++
Sbjct: 433 LNGNRLPRMPNRRCHERMVTCCAWLDEHPANNLLTAGFDRMVA 475
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 30.7 bits (66), Expect = 3.3
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 3 WDNDGDYLAIITPNSNAVLLWECHANKRLNIETGLREPP--SCLAWA--YEEP---LLAV 55
W D +A N + +W +++ +T R + LAW +++P LLA
Sbjct: 155 WSPDATKIASACKNGE-ICIWNAKTGEQIG-KTLKRHKQWITSLAWQPMHKDPTCRLLAS 212
Query: 56 GTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILASEDKTLSINNSD 109
GN+ +++ + + H+ + C W + ++ S+D+T+ + +D
Sbjct: 213 CGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGLIYSGSQDRTVKMWRAD 266
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 29.5 bits (63), Expect = 7.7
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 43 CLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGK-HSKKICCAVWNKDNILILA 97
C++++ + +LA G+ G + ++ T + + H+K +C ++KDN IL+
Sbjct: 269 CISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILS 324
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 7.7
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 43 CLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGK-HSKKICCAVWNKDNILILA 97
C++++ + +LA G+ G + ++ T + + H+K +C ++KDN IL+
Sbjct: 269 CISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILS 324
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,078
Number of Sequences: 27539
Number of extensions: 657771
Number of successful extensions: 1265
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1230
Number of HSP's gapped (non-prelim): 32
length of query: 644
length of database: 12,573,161
effective HSP length: 86
effective length of query: 558
effective length of database: 10,204,807
effective search space: 5694282306
effective search space used: 5694282306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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