Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001293-TA|BGIBMGA001293-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 44 4e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 39 0.012
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 38 0.016
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 38 0.027
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.083
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 33 0.77
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 32 1.0
At3g25250.1 68416.m03154 protein kinase family protein contains ... 31 1.8
At3g62770.2 68416.m07051 transport protein-related weak similari... 31 2.4
At3g62770.1 68416.m07052 transport protein-related weak similari... 31 2.4
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 31 3.1
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 31 3.1
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 30 4.1
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 30 4.1
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 30 5.5
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 30 5.5
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 30 5.5
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 29 7.2
At5g63340.1 68418.m07950 expressed protein 29 9.5
At5g28350.2 68418.m03443 expressed protein 29 9.5
At5g28350.1 68418.m03442 expressed protein 29 9.5
At3g61480.1 68416.m06885 expressed protein 29 9.5
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 29 9.5
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 43.6 bits (98), Expect = 4e-04
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 2 EWDNDGDYLAIITPNSNAVLLWECHANKRLNIETGLREPPSCLAWAYEEPLLAVGTHKGN 61
EW+ + D LA++T +S +LL + + I G +P + L W + +AVG G
Sbjct: 31 EWNPEKDLLAMVTEDSK-ILLHRFNWQRLWTISPG--KPVTSLCWRPDGKAIAVGLEDGT 87
Query: 62 LALYNHHTTKRIPIIGKHSKKICCAVWNKD 91
++L++ K + + H + C W +D
Sbjct: 88 ISLHDVENGKLLRNLKPHDVAVVCLNWEED 117
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 38.7 bits (86), Expect = 0.012
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 18 NAVLLWECHANKRLNI-ETGLREPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPII 76
N V LW ++K + + G+ E + WA LA+GT G + +++ K I +
Sbjct: 188 NCVYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTM 247
Query: 77 GKHSKKICCAVWNKDNILILASEDKTL 103
H ++ W+ ++L S DK++
Sbjct: 248 EGHRLRVGALAWS-SSVLSSGSRDKSI 273
Score = 30.7 bits (66), Expect = 3.1
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 44 LAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILAS 98
L W+ + LA G + L ++N H+T+ + +H+ + W+ + +LAS
Sbjct: 298 LKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLAS 352
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 38.3 bits (85), Expect = 0.016
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 18 NAVLLWECHANKRLNI-ETGLREPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPII 76
N V LW ++K + + G + + WA LAVGT G + +++ KR +
Sbjct: 231 NCVYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTM 290
Query: 77 GKHSKKICCAVWNKDNILILASEDKTL 103
H ++ W ++L S DK++
Sbjct: 291 EGHRLRVGALAWG-SSVLSSGSRDKSI 316
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 44 LAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILAS 98
L W+Y+ LA G + L ++N H+T+ + +H+ + W+ +LAS
Sbjct: 341 LKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLAS 395
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 37.5 bits (83), Expect = 0.027
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 42 SCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDN--ILILASE 99
SC + +A G+ + ++N TK + ++ HS + C WN N +L AS+
Sbjct: 448 SCFG-GLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASD 506
Query: 100 DKTLSI 105
D+T+ I
Sbjct: 507 DQTIRI 512
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.9 bits (79), Expect = 0.083
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 20 VLLWECHANKRLNI-ETGLREPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGK 78
V LW +K + + G + + W E +++GT G + +++ KR+ +G
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGG 255
Query: 79 HSKKICCAVWNKDNILILASEDKTL 103
H + WN IL S D+ +
Sbjct: 256 HQTRTGVLAWN-SRILSSGSRDRNI 279
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 44 LAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILILAS 98
L W++++ LA G + L ++N+H+ + I + +H+ + W+ +LAS
Sbjct: 304 LKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLAS 358
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 42 SCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILIL--ASE 99
SC Y++ +A G+ + +++ T K I + H+ + C W+ N+ +L AS+
Sbjct: 494 SCFG-GYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASD 552
Query: 100 DKTLSI 105
D T+ I
Sbjct: 553 DGTIRI 558
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 32.3 bits (70), Expect = 1.0
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 1 MEWDNDGDYLAIITPNSNAVLLWECHANKRLNIETGLREPPSCLAWAYEEPLLAVGTHKG 60
+ W G YLA + +S++ +W+ I GL S L W+ G
Sbjct: 218 LSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGL-GGISMLKWSPTGDYFFAARFDG 276
Query: 61 NLALYNHHTTKRIP-IIGKHSKKICCAVWNKDNILILASEDKTLSINN 107
L+ +T P + S + A+W+ + IL S K+ ++ +
Sbjct: 277 TFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILISFSKSSTLGS 324
>At3g25250.1 68416.m03154 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 421
Score = 31.5 bits (68), Expect = 1.8
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 447 FGVEEWRTSVRHRAAGALCAAYGDISGTRACLADTARRLLVYCPAAPHDLCPLREPKLFR 506
+G +R S R + + +++G L D RRLL P+ ++ ++ FR
Sbjct: 271 YGATPFRGSNRKETFYRILSKPPNLTGETTSLRDLIRRLLEKDPSRRINVEEIKGHDFFR 330
Query: 507 GVIWD-ICLSDRNVFIVYTDD 526
GV W+ + L R +I DD
Sbjct: 331 GVDWEKVILVSRPPYIPAPDD 351
>At3g62770.2 68416.m07051 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 432
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 52 LLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKD-NILILASEDKTL-SINNSD 109
L+ G KG + + H+ +KR + H +I C +D ++L AS TL I N+
Sbjct: 221 LVCPGLQKGQVRI-EHYASKRTKFVMAHDSRIACFALTQDGHLLATASSKGTLVRIFNTV 279
Query: 110 GDTLR 114
TLR
Sbjct: 280 DGTLR 284
>At3g62770.1 68416.m07052 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 307
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 52 LLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKD-NILILASEDKTL-SINNSD 109
L+ G KG + + H+ +KR + H +I C +D ++L AS TL I N+
Sbjct: 221 LVCPGLQKGQVRI-EHYASKRTKFVMAHDSRIACFALTQDGHLLATASSKGTLVRIFNTV 279
Query: 110 GDTLR 114
TLR
Sbjct: 280 DGTLR 284
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 30.7 bits (66), Expect = 3.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 40 PPSCLAWAYEEPLLAVGTHKGNLALYNHHTTK 71
P SCLA+ + LLA G ++LY HH T+
Sbjct: 1320 PVSCLAFHPYQMLLAAGAAGSFVSLYTHHNTQ 1351
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 204 VGEE-LFQVKNHKDSLTDIAVCNGQAASCGDGQLKLISVWNNGEVSGSVMPTGGAERCGW 262
VGE LF+++ H+D +TD+ +G + K + VW+ E + G W
Sbjct: 136 VGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL-ETQHCMQIVSGHHSEVW 194
Query: 263 SSD 265
S D
Sbjct: 195 SVD 197
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 30.3 bits (65), Expect = 4.1
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 48 YEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILIL-ASEDKTLSIN 106
+ + ++A G L++ + + + + HSKK+ + D+ L+L AS DKT+ I
Sbjct: 232 HSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 107 NSDGD 111
+ GD
Sbjct: 292 RNPGD 296
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 30.3 bits (65), Expect = 4.1
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 48 YEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWNKDNILIL-ASEDKTLSIN 106
+ + ++A G L++ + + + + HSKK+ + D+ L+L AS DKT+ I
Sbjct: 232 HSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Query: 107 NSDGD 111
+ GD
Sbjct: 292 RNPGD 296
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 217 SLTDIAVCNGQA--ASCG-DGQLKLISVWNNGEVSGSVMPTGGAERCGWSSDGRLLATSG 273
S+ IA N A A+ G DG L++ V G G C WS DG+ + T G
Sbjct: 305 SINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 DNDGDYLAIITPNSNAVLLWECHANKRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLA 63
+N+G YL + S + LWE K L G +CL ++ ++ LL G+ G++
Sbjct: 87 NNEGTYL-VGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIR 145
Query: 64 LYN 66
+++
Sbjct: 146 VWS 148
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 36 GLREPPSCLAWAYEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWN-KDNIL 94
G ++ SCLA++Y+ LLA G G + +++ + ++ I W+ + +I+
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV 170
Query: 95 ILASEDKTLSINNSD 109
+ SED +L + N+D
Sbjct: 171 LAGSEDCSLWMWNAD 185
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 6 DGDYLAIITPNSNAVLLWECHANKRLNIETGLREPPSCLAWAYEEPLLAVGTHKGNLALY 65
DG ++A + + + V LW + + + G P ++W+ + LL G+ L ++
Sbjct: 371 DGKWIASASFDKS-VRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW 429
Query: 66 NHHTTKRIPIIGKHSKKICCAVWNKDNILILA-SEDKTLSI 105
T K + H+ ++ W+ D +++ +D+ L +
Sbjct: 430 EIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKL 470
>At5g63340.1 68418.m07950 expressed protein
Length = 172
Score = 29.1 bits (62), Expect = 9.5
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 394 RAMLHTIEQPDSSQAER-ECMMFPEPHMQGAKIVDIHLTADFFIFITDQGHVEHFGVEEW 452
+ ++ T+E+P + +R E M P P ++ + D + + D + + +
Sbjct: 72 KKLIETLEKPSTESKKRSEEMSSPPPLIESKPLNSSQPNLDGYNYPFDM-YRRYLDLTAV 130
Query: 453 RTSVRHRAAGALCAAYGDISGTRACLADTARRLLVY 488
+ +V+ +G+L D+ R ADT R L Y
Sbjct: 131 KATVQSSESGSLIVLRKDLGAPRVIDADTDRHCLHY 166
>At5g28350.2 68418.m03443 expressed protein
Length = 1087
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 43 CLAWAYEEPLLAVGTHKGNLALYN-HHTTKRIPIIGKH 79
C + A E+ +LAVGT KG + LY+ H+ + + H
Sbjct: 220 CASVASEQQILAVGTRKGMVELYDLSHSISLLRTVSLH 257
>At5g28350.1 68418.m03442 expressed protein
Length = 1127
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 43 CLAWAYEEPLLAVGTHKGNLALYN-HHTTKRIPIIGKH 79
C + A E+ +LAVGT KG + LY+ H+ + + H
Sbjct: 260 CASVASEQQILAVGTRKGMVELYDLSHSISLLRTVSLH 297
>At3g61480.1 68416.m06885 expressed protein
Length = 1091
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 43 CLAWAYEEPLLAVGTHKGNLALYN-HHTTKRIPIIGKH 79
C + A E+ +LAVGT KG + LY+ H+ + + H
Sbjct: 214 CASVASEQQILAVGTRKGMVELYDLSHSISLLRTVSLH 251
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/87 (20%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 48 YEEPLLAVGTHKGNLALYNHHTTKRIPIIGKHSKKICCAVWN-KDNILILASEDKTLSIN 106
+E P + + + ++N + I ++ H+ + CA ++ K+++++ AS D+T+ +
Sbjct: 103 HENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV- 161
Query: 107 NSDGDTLRIISLRDTPNDLQVSEMKTD 133
D L+ S + ++ S+M +D
Sbjct: 162 -WDIGALKKKSASPADDLMRFSQMNSD 187
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.136 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,344,712
Number of Sequences: 28952
Number of extensions: 635341
Number of successful extensions: 1247
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 36
length of query: 644
length of database: 12,070,560
effective HSP length: 86
effective length of query: 558
effective length of database: 9,580,688
effective search space: 5346023904
effective search space used: 5346023904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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