Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001292-TA|BGIBMGA001292-PA|IPR001199|Cytochrome b5
(195 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator Dap1|Sch... 99 5e-22
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 34 0.016
SPBC32F12.05c |cwf12||complexed with Cdc5 protein Cwf12 |Schizos... 29 0.60
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 28 0.79
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 2.4
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 27 2.4
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 26 3.2
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 26 3.2
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 25 5.6
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 25 5.6
SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr 2||... 25 5.6
SPAC3A11.13 ||SPAC3H5.02|prefoldin subunit 6|Schizosaccharomyces... 25 7.4
SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyce... 25 7.4
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 25 9.7
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 25 9.7
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 25 9.7
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 25 9.7
>SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator
Dap1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 166
Score = 98.7 bits (235), Expect = 5e-22
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 10/157 (6%)
Query: 33 VFVST-FVILYKFYYKYKTHCSKVAPLK-KLPKLRKDMTAVELRQYDGTQEGGRVLMAVN 90
VF+ T F+ L ++ K S +A + K P+ R D T EL++Y+G++ V +A+
Sbjct: 7 VFIVTLFLYLLITRWRRKNEKSFIASEEPKQPEWR-DYTPAELKEYNGSKNS-LVFLAIK 64
Query: 91 GWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVT---APEKD---YDDLSDLNSMEM 144
G +++VT G++FYGP GPY+ F G DA+RGLA S P+ D DD SDLN E
Sbjct: 65 GTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFIPDSDAEELDDCSDLNDEER 124
Query: 145 ESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEE 181
+++ +W+ F + Y VGRL+ P E + E EE
Sbjct: 125 QALNDWKAFFDQKYQAVGRLISPREARAAATISETEE 161
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 33.9 bits (74), Expect = 0.016
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 130 EKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPN 189
E D SDL M+ME+ E +E+ D + E N DE+ ++ D S L
Sbjct: 4096 EGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAE 4155
Query: 190 DDKKTN 195
DD+K N
Sbjct: 4156 DDEKMN 4161
>SPBC32F12.05c |cwf12||complexed with Cdc5 protein Cwf12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 115 RDATRGLATF-SVTAPEKDYDDLSDLNSMEMESVREWEEQFRE 156
+D +R ++ S T PE DL+D + M EWE Q R+
Sbjct: 38 KDISRKISRIQSATLPEYQIRDLNDAINRLMREKHEWEVQIRD 80
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 28.3 bits (60), Expect = 0.79
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 19 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAP-LKKLPKLRKDMTAVELRQYD 77
E L L F V T +L +FY + HC +AP +KL + D + V + + D
Sbjct: 355 EDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKID 414
Query: 78 GTQ 80
T+
Sbjct: 415 ATE 417
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 39 VILYKFYYKYKTHCSKVAPLKKLPKLRKDMTAVELRQYDGTQEG 82
V++ KFY + HC +AP + + + L + D T+EG
Sbjct: 41 VLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEG 84
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 131 KDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEE 170
KD+DD + LN ++ + E Q +D++ +L G E
Sbjct: 606 KDFDDFTPLNLLKCVNYSLMEFQKNSTFDMLEKLYEIGRE 645
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 2 DSPPEVENVQAKHSGFFET--LKTLFCQPFIYFV 33
++P +VEN+ +K FF L L+ +P ++F+
Sbjct: 242 ENPRKVENIVSKQIAFFRKLYLPLLYAEPGVHFI 275
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 157 NYDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDD 191
NYD ++ P P+NY D + +TS+ + D
Sbjct: 75 NYDQQPDIIHPSSTPKNYHDLNCTKGETSSDDSTD 109
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 26.2 bits (55), Expect = 3.2
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 107 GPYAVFGGRDATRGLATFS--VTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 164
G Y GR RGL + + D + L M M + QFR Y+++ L
Sbjct: 679 GEYTQCSGRAGRRGLDVTGTVIILSRSELPDTASLRHMIMGPSSKLISQFRLTYNMILNL 738
Query: 165 LR 166
LR
Sbjct: 739 LR 740
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 156 ENYDLVGRLLRPGEEPR 172
ENY GR+++ GE+PR
Sbjct: 505 ENYHKEGRVIKEGEQPR 521
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 25.4 bits (53), Expect = 5.6
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 130 EKDYDDLSDLNSMEMESVREWE----EQFRENYDLVGRLLRPGEE-PRNYSDEEPEEADT 184
E D DD ++++ E+E +WE + +N +L +L + E+ DEE E +
Sbjct: 688 EMDEDDFEEIDTDEIEEQSDWEMISNQDASDNEELERKLDKVLEDADAKVKDEESSEEE- 746
Query: 185 SALPNDDK 192
L ND++
Sbjct: 747 --LMNDEQ 752
>SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 30 IYFVFVSTFVILYKFYYKYKTHCSKVAPLKKLPKLR 65
IYF+ + + L Y+ T C + KK+P+L+
Sbjct: 210 IYFLHSPSIIALGAIYHTNPTICLQYIEAKKIPELQ 245
>SPAC3A11.13 ||SPAC3H5.02|prefoldin subunit 6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 114
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 131 KDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 190
K Y +L S +ES+++ E Q +EN ++ L + + Y P S ++
Sbjct: 6 KKYQNLQTELSTYVESLKKLETQLQENTTVLNELEKVAPDSNIYKQIGPTLVKQS---HE 62
Query: 191 DKKTN 195
+ KTN
Sbjct: 63 EAKTN 67
>SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 120 GLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVG 162
G A V E YDD D+++ E + ++++FR L G
Sbjct: 27 GKAAEIVDTHENFYDDQGDIDNPEELAELGYKQEFRRQLSLFG 69
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 24.6 bits (51), Expect = 9.7
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 121 LATFSVT-APEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRN-YSDEE 178
+ +F +T + EK D ++S+EM ++ +E +E++ E+PRN D +
Sbjct: 89 IKSFILTKSKEKPCDLEMGIDSIEMGRMQSFESDQQESHTGQANFPTDQEDPRNPQLDSQ 148
Query: 179 PEEADTSALPNDDKK 193
E T DKK
Sbjct: 149 YEAFITQGESQTDKK 163
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 18 FETLKTLFCQPFIYFVFVSTFVILYKFYYKY 48
FE L+ +F I F F+ + +LY F Y Y
Sbjct: 335 FEILRLMFFSGII-FGFIGSSFLLYVFQYAY 364
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 69 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAV 111
T E+ +G QE G + ++ WI D+ G P P++V
Sbjct: 338 TEYEIPMPEG-QEAGPITSEISKWILDIQYGKE---PNNPWSV 376
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 129 PEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGE 169
P+ + DL +L + +E+E+ R N +G +R G+
Sbjct: 38 PKINITDLEELQEFQGRKRKEFEDAIRRNRLAMGHWMRYGQ 78
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.137 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 987,594
Number of Sequences: 5004
Number of extensions: 42068
Number of successful extensions: 150
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 137
Number of HSP's gapped (non-prelim): 18
length of query: 195
length of database: 2,362,478
effective HSP length: 69
effective length of query: 126
effective length of database: 2,017,202
effective search space: 254167452
effective search space used: 254167452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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