Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001292-TA|BGIBMGA001292-PA|IPR001199|Cytochrome b5
(195 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0544 - 18655186-18655567,18656835-18657151 98 5e-21
10_08_0543 - 18649894-18650233,18651446-18651981 97 8e-21
02_05_0089 - 25715637-25716333,25716481-25717238 95 4e-20
03_02_0826 + 11569961-11570301,11572220-11572454 93 1e-19
02_05_1047 + 33745656-33745964 87 7e-18
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 37 0.012
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 33 0.15
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 31 0.81
07_03_0382 + 17470508-17470807,17471449-17474517 30 1.4
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 29 1.9
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 3.3
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 29 3.3
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 28 5.7
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 27 7.6
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 27 7.6
04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836 27 7.6
03_01_0604 + 4449416-4449766,4450150-4450374 27 7.6
12_01_0287 - 2152179-2152424,2153300-2153339,2153612-2153831,215... 27 10.0
09_01_0174 + 2504058-2504253,2504929-2505076,2505265-2505456,250... 27 10.0
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 27 10.0
02_04_0298 - 21733620-21733805,21733900-21734025,21734128-217342... 27 10.0
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 27 10.0
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 97.9 bits (233), Expect = 5e-21
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 67 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 126
+++ ELRQYDG+ +LMA+ G I+DVT+ FYGPGGPYA+F G+DA+R LA S
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132
Query: 127 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSA 186
P+ D+S L E++++++WE +F Y VG + + PE +T+A
Sbjct: 133 -EPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVGTVKKTVPVEDGAPSTSPETTETAA 191
Query: 187 LPNDDK 192
+K
Sbjct: 192 AAEPEK 197
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 97.1 bits (231), Expect = 8e-21
Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 53 SKVAPLKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVF 112
S+ AP P ++TA EL QYDG+ +LMA+ G I+DV++ FYGPGGPYA+F
Sbjct: 132 SEEAPPPPEPVQVGEITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALF 191
Query: 113 GGRDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 164
G+DA+R LA S P+ DD+S L+ +E+ ++++WE +F Y VG +
Sbjct: 192 AGKDASRALAKMSF-EPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTI 242
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 94.7 bits (225), Expect = 4e-20
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 67 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 126
++T ELR YDG+ +LMA+ G I+DVT+ FYGPGGPYA+F GRDA+R LA S
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALAKMSF 279
Query: 127 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 164
+ D+S L +E+E++ EWE +F Y VG +
Sbjct: 280 ELDDLT-GDVSGLGPIELEALHEWEGKFMSKYVKVGTI 316
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 67 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 126
++T +L YDG +L+A+ G ++DVTRG FYGP GPY++F GRDATR LA S
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALALMSF 140
Query: 127 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 164
P DL L E+E +++WE++F+E Y VG L
Sbjct: 141 D-PIDLTGDLDGLGPDELEVLQDWEDKFKERYPTVGHL 177
>02_05_1047 + 33745656-33745964
Length = 102
Score = 87.4 bits (207), Expect = 7e-18
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 67 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 126
++TA +LR YDG+ + ++V G ++DVT G FYGPGG YAVF GR+A+R L S
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRALGKMSK 63
Query: 127 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 164
+ DLS L+ E+ + +WE +F+ Y +V RL
Sbjct: 64 DDADVS-GDLSGLSDKELGVLADWETKFQAKYPVVARL 100
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 36.7 bits (81), Expect = 0.012
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 19 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAP-LKKLPKLRKDMTAVELRQYD 77
+ +KT+ VF S +L +FY + HC K+AP L+++ KD V + + D
Sbjct: 370 QPVKTVVADNLREVVFNSGKNVLLEFYAPWCGHCQKLAPILEEVAVSLKDDEDVVIAKMD 429
Query: 78 GTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDA 117
GT AV G+ FY GG + GR A
Sbjct: 430 GTANDVPSDFAVEGY-----PSMYFYSSGGNLLPYDGRTA 464
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 93 IFDVTRGNRFYGPGGPYAVFGG 114
+FDVT+G YGPGG Y F G
Sbjct: 52 VFDVTKGKSNYGPGGGYHHFAG 73
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 30.7 bits (66), Expect = 0.81
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 130 EKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL-LRPGEEPRNYSDEEPEEA 182
E+D DL ++ E E RE E Q R GR RP EE +EE EEA
Sbjct: 72 EEDEKDLEEMRRNEEEERRE-ETQTRRRRRRRGRKPKRPAEESEEDEEEEEEEA 124
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 59 KKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGN 100
KK+P K + AV LR+ + TQE + + GW FD RG+
Sbjct: 359 KKIPMAVKIIGAV-LRRKEQTQESWQRVYEFEGWSFDDLRGD 399
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 128 APEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGE 169
AP K YD+ L M+ E + E EE F L+ + + G+
Sbjct: 2 APSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGD 43
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 19 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAPL 58
E +K + FVF S +L +FY + HC K+AP+
Sbjct: 384 EPVKVVVADNVHDFVFKSGKNVLVEFYAPWCGHCKKLAPI 423
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 107 GPYAVFGGRDATRGLATFS--VTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 164
G Y GR RGL + + + SDL ++ + E QFR Y ++ L
Sbjct: 856 GEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHL 915
Query: 165 LRPGE 169
LR E
Sbjct: 916 LRVEE 920
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 51 HCSKVAP----LKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPG 106
HCSK K PK ++ A E +G R +G+ V G+R P
Sbjct: 213 HCSKCDERGHTYKHCPKDKEKPNAAEAGLSGSAVDGARPTDGTSGYTSVVGPGDRSPTPV 272
Query: 107 GPYAVFGGRD 116
PY GG D
Sbjct: 273 SPYCGTGGSD 282
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 130 EKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEAD 183
E++ + ++ E+E E EE+ E+ D+V + EE DEE +E +
Sbjct: 436 EEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEEDEEEDEESDETE 489
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 114 GRDATRGLATFSVTAPEKDYDDLSDLNSMEME 145
GR A F +T P+K Y+ LS L ME E
Sbjct: 528 GRREALSNAEFLLTVPKKKYNTLSRLKRMEAE 559
>04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836
Length = 298
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 147 VREWEEQFRENYDLVGR-LLRPGEEPRNYSDEEPEEADTSALPNDD 191
+R W + +++ R R +EP N SDE + T A P DD
Sbjct: 197 LRLWNSEVGDSFRKSARSAAREDQEPANASDEAAPVSATFARPGDD 242
>03_01_0604 + 4449416-4449766,4450150-4450374
Length = 191
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 163 RLLRPGEEPRNYSDEEPEEADTSALPNDD 191
RL R G R + D+EPEE DTS + D
Sbjct: 15 RLRRRGAA-RRWLDDEPEEKDTSCMTTGD 42
>12_01_0287 -
2152179-2152424,2153300-2153339,2153612-2153831,
2153917-2153995,2154087-2154155,2154237-2154329,
2154411-2154477,2154579-2154640,2154729-2154774,
2155359-2155404,2155490-2155547,2155717-2155755,
2155849-2155920,2156067-2156158,2157036-2157135
Length = 442
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 128 APEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGE 169
AP K Y + L M+ E + E EE F L+ + + G+
Sbjct: 2 APSKQYSEGGQLQLMDAERIEEEEECFESIDKLISQGINSGD 43
>09_01_0174 +
2504058-2504253,2504929-2505076,2505265-2505456,
2505878-2506006,2506368-2506537,2506946-2507076,
2507391-2507468
Length = 347
Score = 27.1 bits (57), Expect = 10.0
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 83 GRVLMAVNGWI-FDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDDLSDLNS 141
G VL+A G I + VT + G V G + G+A ++TA K YD +
Sbjct: 144 GCVLIAGTGSIAYGVTEDGKVARAAGAGPVLGDWGSGYGIAAQALTAVVKAYDGRGPHTN 203
Query: 142 MEMESVREWE 151
+ E +R+ E
Sbjct: 204 LTREILRKLE 213
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 96 VTRGNRFYGPGG-PYAVFGGRDATRGLATFSVTAPEKDYDDLSDLNSM 142
++RG F P G P V RD+T + F V A + L+ +NS+
Sbjct: 397 LSRGTVFVVPSGHPIVVTSSRDSTLQIVCFDVHANNNERMYLAGMNSV 444
>02_04_0298 -
21733620-21733805,21733900-21734025,21734128-21734213,
21734751-21734866,21734951-21735628,21736080-21736105
Length = 405
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 158 YDLVGRLLRPGEEPRNYSDEEPEEADTSALPNDDK 192
+D+V L EP+ Y D +P + D + P DDK
Sbjct: 57 HDVVPGLEWDDTEPKVYEDPKPAKDDVNQPPVDDK 91
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 127 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSA 186
T ++ Y LS+ N + ++EW+ +F E L+ + E R+ DE + S
Sbjct: 313 TLQQQQYAALSEENEDTDDELKEWQTKFEERMALLQNKISKLE--RDVDDENTTSSFLSK 370
Query: 187 LPND 190
ND
Sbjct: 371 AIND 374
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.137 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,335,453
Number of Sequences: 37544
Number of extensions: 275223
Number of successful extensions: 734
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 711
Number of HSP's gapped (non-prelim): 26
length of query: 195
length of database: 14,793,348
effective HSP length: 78
effective length of query: 117
effective length of database: 11,864,916
effective search space: 1388195172
effective search space used: 1388195172
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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