Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001292-TA|BGIBMGA001292-PA|IPR001199|Cytochrome b5
(195 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian... 111 2e-25
U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian... 109 1e-24
AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical ... 56 2e-08
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 33 0.18
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 33 0.18
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 33 0.18
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 33 0.18
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 33 0.18
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 31 0.41
AF016451-8|AAB66004.1| 273|Caenorhabditis elegans Serpentine re... 31 0.71
AF016451-7|AAB66003.2| 312|Caenorhabditis elegans Serpentine re... 31 0.71
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 30 1.2
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 30 1.2
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 30 1.2
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 30 1.2
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 30 1.2
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 30 1.2
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 30 1.2
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 29 2.2
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 29 2.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 2.2
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 3.8
Z75547-8|CAA99901.1| 402|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 28 5.0
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 28 5.0
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 28 5.0
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF039046-1|AAB94210.1| 458|Caenorhabditis elegans F-box a prote... 27 6.6
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 27 6.6
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 27 6.6
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 27 6.6
U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective fasci... 27 8.8
AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormo... 27 8.8
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 27 8.8
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 27 8.8
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 27 8.8
>U41552-4|AAD31555.1| 198|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform a
protein.
Length = 198
Score = 111 bits (268), Expect = 2e-25
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 14 HSGFFETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAPLKKLPKL-RKDMTAVE 72
H FF + + + +Y V+ + FY+ ++ AP K+L L DMT E
Sbjct: 10 HKSFFTMDLSSWFEFTMYDAVFLVVVLGFFFYWLTRSEQPLPAPPKELAPLPMSDMTVEE 69
Query: 73 LRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKD 132
LR+YDG + +L +NG I+DVTRG FYGPG Y G DATR L T A +
Sbjct: 70 LRKYDGVKNE-HILFGLNGTIYDVTRGKGFYGPGKAYGTLAGHDATRALGTMDQNAVSSE 128
Query: 133 YDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 178
+DD + +++ E E+ EWE QF+ Y VGRL++ E +Y + +
Sbjct: 129 WDDHTGISADEQETANEWETQFKFKYLTVGRLVKNSSEKADYGNRK 174
>U41552-5|AAP82646.1| 183|Caenorhabditis elegans Vema (mammalian
ventral midlineantigen) related protein 1, isoform b
protein.
Length = 183
Score = 109 bits (262), Expect = 1e-24
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 39 VILYKFYYKYKTHCSKVAPLKKLPKL-RKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVT 97
V+ + FY+ ++ AP K+L L DMT ELR+YDG + +L +NG I+DVT
Sbjct: 20 VLGFFFYWLTRSEQPLPAPPKELAPLPMSDMTVEELRKYDGVKNE-HILFGLNGTIYDVT 78
Query: 98 RGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFREN 157
RG FYGPG Y G DATR L T A ++DD + +++ E E+ EWE QF+
Sbjct: 79 RGKGFYGPGKAYGTLAGHDATRALGTMDQNAVSSEWDDHTGISADEQETANEWETQFKFK 138
Query: 158 YDLVGRLLRPGEEPRNYSDEE 178
Y VGRL++ E +Y + +
Sbjct: 139 YLTVGRLVKNSSEKADYGNRK 159
>AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical
protein H38K22.3 protein.
Length = 326
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 69 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 128
T +L +DGT++ + +A+ G +++V +YGPG Y F GRDATR T
Sbjct: 102 TPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQE 161
Query: 129 PEKDYDDLSDLNSMEMESVREWEEQFRENYDLVG 162
L+ E+ S+R+W + + Y LVG
Sbjct: 162 SGL-IATTHGLSHDELLSIRDWVSFYDKEYPLVG 194
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 123 TFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEA 182
T ++ + YDD + N +E V W+E++ + + + R G+E +E EEA
Sbjct: 675 TRQISEANEKYDDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQE------KEREEA 728
Query: 183 DTSALPND-----DKKTN 195
D AL +D DK TN
Sbjct: 729 DLRALLDDLRGNFDKLTN 746
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 123 TFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEA 182
T ++ + YDD + N +E V W+E++ + + + R G+E +E EEA
Sbjct: 675 TRQISEANEKYDDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQE------KEREEA 728
Query: 183 DTSALPND-----DKKTN 195
D AL +D DK TN
Sbjct: 729 DLRALLDDLRGNFDKLTN 746
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 123 TFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEA 182
T ++ + YDD + N +E V W+E++ + + + R G+E +E EEA
Sbjct: 435 TRQISEANEKYDDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQE------KEREEA 488
Query: 183 DTSALPND-----DKKTN 195
D AL +D DK TN
Sbjct: 489 DLRALLDDLRGNFDKLTN 506
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 123 TFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEA 182
T ++ + YDD + N +E V W+E++ + + + R G+E +E EEA
Sbjct: 675 TRQISEANEKYDDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQE------KEREEA 728
Query: 183 DTSALPND-----DKKTN 195
D AL +D DK TN
Sbjct: 729 DLRALLDDLRGNFDKLTN 746
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 145 ESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEAD 183
E + +EE+F E Y+ +G+ R +E Y EEPE+ +
Sbjct: 589 EDINGFEEEFEEEYEGIGQ--RDDQEEEEYDAEEPEDQE 625
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 31.5 bits (68), Expect = 0.41
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 19 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAP--LKKLPKLRKDMTAVELRQY 76
E + TL + F F+ + ++L +FY + HC K+AP K KL+ + V+L +
Sbjct: 147 EEVVTLTTENFDDFIS-NNELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKV 205
Query: 77 DGTQEGG-RVLMAVNGW-IFDVTRGNRFYGPGGPYAVFG 113
D T E V+G+ + R R + GP G
Sbjct: 206 DATIEKDLGTKYGVSGYPTMKIIRNGRRFDYNGPREAAG 244
>AF016451-8|AAB66004.1| 273|Caenorhabditis elegans Serpentine
receptor, class t protein65 protein.
Length = 273
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 9 NVQAKHSGFFETLKTLFCQPFIYFVFVSTFVILYKFYYKYKT 50
+++ K +G F L+ + C P + F S +I+Y Y ++T
Sbjct: 208 DMEVKFAGLFAELELVLCFPTLALSFCSYILIIYSIYKVFQT 249
>AF016451-7|AAB66003.2| 312|Caenorhabditis elegans Serpentine
receptor, class t protein64 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 1 MDSPPEVENVQAKHSGFFETLKTLFCQPFIYFVFVSTFVILYKFYYK 47
+ P +++ K++ F +L+ + C P + F+S +I+Y Y K
Sbjct: 158 LTGPNWAYDMKVKYADLFASLELVLCFPTLALSFISYILIIYSIYKK 204
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 39 VILYKFYYKYKTHCSKVAP--LKKLPKLRKDMTAVELRQYDGTQE 81
+ L KFY + HC K+AP + PKL + V L + D T E
Sbjct: 39 IALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTE 83
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 126 VTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 178
V++ E+ +++ SD N + + W EQF EN D++ L R + Y D+E
Sbjct: 51 VSSKERKWEECSDAN----KCLIMWPEQFSENIDILTTLYRIASD--EYEDKE 97
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 126 VTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEE 178
V++ E+ +++ SD N + + W EQF EN D++ L R + Y D+E
Sbjct: 51 VSSKERKWEECSDAN----KCLIMWPEQFSENIDILTTLYRIASD--EYEDKE 97
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 140 NSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTS-ALPNDDKK 193
N+ E EW + E D RLL +PR Y+D D S P D++
Sbjct: 448 NAQSQEEKDEWNRKMSELLDQQKRLLAALVDPRRYNDMSSGMGDLSLGAPGGDRR 502
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 140 NSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTS-ALPNDDKK 193
N+ E EW + E D RLL +PR Y+D D S P D++
Sbjct: 529 NAQSQEEKDEWNRKMSELLDQQKRLLAALVDPRRYNDMSSGMGDLSLGAPGGDRR 583
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 140 NSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTS-ALPNDDKK 193
N+ E EW + E D RLL +PR Y+D D S P D++
Sbjct: 534 NAQSQEEKDEWNRKMSELLDQQKRLLAALVDPRRYNDMSSGMGDLSLGAPGGDRR 588
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 140 NSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTS-ALPNDDKK 193
N+ E EW + E D RLL +PR Y+D D S P D++
Sbjct: 2094 NAQSQEEKDEWNRKMSELLDQQKRLLAALVDPRRYNDMSSGMGDLSLGAPGGDRR 2148
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 140 NSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTS-ALPNDDKK 193
N+ E EW + E D RLL +PR Y+D D S P D++
Sbjct: 2094 NAQSQEEKDEWNRKMSELLDQQKRLLAALVDPRRYNDMSSGMGDLSLGAPGGDRR 2148
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57
protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 39 VILYKFYYKYKTHCSKVAP--LKKLPKLRKDMTAVELRQYDGTQE 81
+ L KFY + HC K+AP + PKL + V L + D T E
Sbjct: 39 IALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTE 83
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 131 KDYDDLSDLNSMEMESVREWEEQFRENYDLV-GRLLRPGEEPRNYSDEE 178
+D D D N + RE EE+ REN D GR R E PR +++
Sbjct: 425 RDRDRERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDD 473
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 131 KDYDDLSDLNSMEMESVREWEEQFRENYDLV-GRLLRPGEEPRNYSDEE 178
+D D D N + RE EE+ REN D GR R E PR +++
Sbjct: 419 RDRDRERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDD 467
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 114 GRDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRN 173
G + F + + + +D + ++++++ + E R N VGR++ G++ N
Sbjct: 185 GEQNRKSRLQFQLPLYDCNVEDARFVEEKDVKTLQNFVENVRNNVIGVGRVVEIGKDSDN 244
Query: 174 YSDEE 178
Y D E
Sbjct: 245 YGDNE 249
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 130 EKDYDDLS-DLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSA 186
EK+ +S D +E+E+ +E + VG + P EEP EEPE D S+
Sbjct: 746 EKEEPQVSVDPEPVEVEAQQEPADTEEYPIPSVGTIEEPAEEPAEEPVEEPEPMDDSS 803
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 140 NSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTS 185
N+ E EW + E D RLL +PR Y+D D S
Sbjct: 2094 NAQSQEEKDEWNRKMSELLDQQKRLLAALVDPRRYNDMSSGMGDLS 2139
>Z75547-8|CAA99901.1| 402|Caenorhabditis elegans Hypothetical
protein R11D1.7 protein.
Length = 402
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 6 EVENVQAKHSGFFETLKTLFCQPFIYFVFVSTFVILYKFYY 46
EV V + F K C P + FVF TF+++Y ++
Sbjct: 14 EVFTVLGALAASFLVEKRFLCAPRMIFVFQQTFMLIYIIFF 54
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein
disulfide isomerase protein2, isoform b protein.
Length = 437
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 40 ILYKFYYKYKTHCSKVAP--LKKLPKLRKDMTAVELRQYDGTQEG 82
IL +FY + HC +AP K +L+++ + ++L + D T G
Sbjct: 43 ILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHG 87
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein
disulfide isomerase protein2, isoform c protein.
Length = 371
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 40 ILYKFYYKYKTHCSKVAP--LKKLPKLRKDMTAVELRQYDGTQEG 82
IL +FY + HC +AP K +L+++ + ++L + D T G
Sbjct: 43 ILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHG 87
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein
disulfide isomerase protein2, isoform a protein.
Length = 493
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 40 ILYKFYYKYKTHCSKVAP--LKKLPKLRKDMTAVELRQYDGTQEG 82
IL +FY + HC +AP K +L+++ + ++L + D T G
Sbjct: 43 ILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHG 87
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 131 KDYDDLSDLNSMEMESVREWEEQFRENYDLV-GRLLRPGEEPR 172
+D D D N + RE EE+ REN D GR R E PR
Sbjct: 425 RDRDRERDRNDRDRNREREREERERENRDNERGRRERESEAPR 467
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 129 PEKDYDDLSDLNSMEMESVREWEEQFRENY---DLVGRLLRPGEEPRNYSDEEPEEADTS 185
PEK ++ D E + EE+ +E G GEE +N DE+ EE
Sbjct: 77 PEKKEEEKKDATKKEEAKEEKKEEERKEEKKEESKEGEKKNSGEEKKNSGDEKKEEGGKK 136
Query: 186 ALPNDDKK 193
D +K
Sbjct: 137 DDAKDGEK 144
>AF039046-1|AAB94210.1| 458|Caenorhabditis elegans F-box a protein
protein 195 protein.
Length = 458
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 116 DATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYS 175
DA + F V+ DD++ + ++++ +W E+ +LVG + EE +
Sbjct: 353 DAILHMTHFDVSVIHLSTDDVAKIKNVKVHLDDDWHEE-----ELVGAV--GAEEEEDEE 405
Query: 176 DEEPEEAD 183
DEE E+ D
Sbjct: 406 DEEEEDED 413
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 144 MESVREWEEQFRENYDLVGRLLRPGEEPRNYSD 176
++ +R+W + +EN +L + +R E R +SD
Sbjct: 239 LDCIRQWRSKDQENVELATKTVRSCPECRQHSD 271
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 144 MESVREWEEQFRENYDLVGRLLRPGEEPRNYSD 176
++ +R+W + +EN +L + +R E R +SD
Sbjct: 239 LDCIRQWRSKDQENVELATKTVRSCPECRQHSD 271
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
Query: 54 KVAPLKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPY 109
K + + + KL K M+A ++ + + T G +M+ + + FYGPG PY
Sbjct: 1267 KTSKIDSMEKLHKSMSAAQMHEMNST---GYAIMSSQ-------QISEFYGPGSPY 1312
>U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective
fasciculation of axonsprotein 1 protein.
Length = 419
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 115 RDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFR 155
R+ + A+ T EK D L + ++ESV +W +QFR
Sbjct: 216 REDSPSSASDGKTEDEKK-DSLQETTMSQLESVLQWAQQFR 255
>AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormone
receptor FAX-1 protein.
Length = 419
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 115 RDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFR 155
R+ + A+ T EK D L + ++ESV +W +QFR
Sbjct: 216 REDSPSSASDGKTEDEKK-DSLQETTMSQLESVLQWAQQFR 255
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 117 ATRGLATFSVTAPEKDYDDLSDLNSMEMESVRE 149
ATRG++ KD D+ DL E+E V++
Sbjct: 466 ATRGISNMQKLVDFKDLADIGDLVKSEVEKVKD 498
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 122 ATFSVTAPE-KDYDDLSDLNSMEMESVREWEEQFR 155
ATF+++ K Y LS++ +E + WE+QF+
Sbjct: 261 ATFNISVRHNKKYTVLSNMPPVESHDHKSWEDQFK 295
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 136 LSDLNSMEMESVREWE----EQFRENYDLVGRLLRPGEEPR 172
LSD S++ +V+EW+ E E Y+L+G+ G++ R
Sbjct: 423 LSDTKSVQANAVKEWDVECAELEEEIYELIGKRKTEGKKLR 463
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.137 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,422,410
Number of Sequences: 27539
Number of extensions: 236518
Number of successful extensions: 749
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 717
Number of HSP's gapped (non-prelim): 49
length of query: 195
length of database: 12,573,161
effective HSP length: 78
effective length of query: 117
effective length of database: 10,425,119
effective search space: 1219738923
effective search space used: 1219738923
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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